prot_Ecto-sp13_S_contig1734.5178.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1734.5178.1
Unique Nameprot_Ecto-sp13_S_contig1734.5178.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length150
Homology
BLAST of mRNA_Ecto-sp13_S_contig1734.5178.1 vs. uniprot
Match: D8LBS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS6_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 8.390e-45
Identity = 71/88 (80.68%), Postives = 79/88 (89.77%), Query Frame = 0
Query:    1 MRSDPRLVKMWWDGGLVMISAIVEDAAGVTGLPGITFTHGPWKLTIEALKTNIDITAPADANDQDGFVAVCGGDVGLNRIMKLGHHLR 88
            MRS+PRL  MWWDGGLVM+SAIVEDAAGVTGLPG+TFTH  WKLTIEAL+T IDITAPADA +Q GFVA CGGDVG+NRI +LGHHL+
Sbjct:    1 MRSNPRLANMWWDGGLVMVSAIVEDAAGVTGLPGVTFTHSRWKLTIEALETKIDITAPADAKNQAGFVAGCGGDVGVNRIKRLGHHLQ 88          
BLAST of mRNA_Ecto-sp13_S_contig1734.5178.1 vs. uniprot
Match: A0A6H5JFX2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX2_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.110e-26
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 MRSDPRLVKMWWDGGLVMISAIVEDAAGVTGLPGITFTHGPWKLTIEALKTNI 53
            MRSDPRLVKMWWDG LVM++AIVEDAAGVTGLPG+TFTHGPWKLTIEALKT +
Sbjct:   12 MRSDPRLVKMWWDGDLVMVTAIVEDAAGVTGLPGVTFTHGPWKLTIEALKTRL 64          
BLAST of mRNA_Ecto-sp13_S_contig1734.5178.1 vs. uniprot
Match: A0A6H5KNI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI2_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.620e-20
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    3 SDPRLVKMWWDGGLVMISAIVEDAAGVTGLPGITFTHGPWKLTIEALKTNIDITAPADANDQDGFVAVCGGDVGLNRIMKLGHHLR 88
            SDPRLVKM WDGGLVM++A+++DA G   +P I  T  P  +TIEAL   + I AP +A + DGF A CGG VG+N + +L  H++
Sbjct: 2814 SDPRLVKMRWDGGLVMVTAVIKDAVGGKAIPHIDLTQSPSGMTIEALGVKVRIAAPPEAKNMDGFSAACGGAVGVNSMRRLRGHVQ 2899          
BLAST of mRNA_Ecto-sp13_S_contig1734.5178.1 vs. uniprot
Match: D7FWI3_ECTSI (Global transcription factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI3_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 7.530e-20
Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    3 SDPRLVKMWWDGGLVMISAIVEDAAGVTGLPGITFTHGPWKLTIEALKTNIDITAPADANDQDGFVAVCGGDVGLNRIMKLGHHLR 88
            SDPRLVKM WDGGLVM++A+V+DA G   +P I  T  P  +T+EAL   I I AP +A + DGF A CGG VG+N + +L   L+
Sbjct: 2088 SDPRLVKMQWDGGLVMVTAVVKDAKGGKAIPDIDLTQSPSGMTMEALGVKIRIAAPPEAKNNDGFSAACGGAVGVNSMRRLRGQLQ 2173          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1734.5178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBS6_ECTSI8.390e-4580.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFX2_9PHAE1.110e-2688.68Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KNI2_9PHAE1.620e-2051.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWI3_ECTSI7.530e-2052.33Global transcription factor group n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1734contigEcto-sp13_S_contig1734:13741..14190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1734.5178.1mRNA_Ecto-sp13_S_contig1734.5178.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1734 13436..14190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1734.5178.1 ID=prot_Ecto-sp13_S_contig1734.5178.1|Name=mRNA_Ecto-sp13_S_contig1734.5178.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp
MRSDPRLVKMWWDGGLVMISAIVEDAAGVTGLPGITFTHGPWKLTIEALK
TNIDITAPADANDQDGFVAVCGGDVGLNRIMKLGHHLRGWTTISFRMLGV
ARRVFGGSTTSNRSALSCARWTTSSRGATSSSILPWGLSGRNSATTRPR*
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