prot_Ecto-sp13_S_contig1728.5149.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1728.5149.1
Unique Nameprot_Ecto-sp13_S_contig1728.5149.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length293
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1728.5149.1 vs. uniprot
Match: A0A6H5LJI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJI1_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 2.180e-171
Identity = 242/293 (82.59%), Postives = 254/293 (86.69%), Query Frame = 0 
Query:    1 MAMSTTRKRGAFFVFEKPLVSRLPFEVEVDAGGLAKKRARIAXXXXXXXXXXXXXXAHEDLDVNTSENVETQQWWTREALQERHRGEEADSSSSSSPIAPVGADVERGCSLGGSWSATEGR-RGTRGGTRQSLERVEPECLEKEALSTATTRGAGPGRTLVQLKIDAMFAVPGLPCTPPSECSGRNPDAKICDGDCAGTTSRGDGSMDVDVGVGAEPREEGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCSTCGVPHCSLCLAADYNSQFECYFCPPCYQDERLESC 292
            MAMSTTRKRGAF+VFEKPLVSRLPFE EVDAGGLA+KR RIA              AHEDLDVNTSENVETQ WWTREALQERHRGEEADS SSSS IAPVGADV RGC LGG W A EG  R TRGGTR S+ERVEPEC +K+A+STA T GAGPGRTLVQLKIDAMFAVPGLPCTPPSECSGR  +A++CDG+CA TT RGDG+MDVDVGVGAEP EEGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCS CGVPHCSLCLAADYNSQFECYFCP CYQD+RLE C
Sbjct:    1 MAMSTTRKRGAFYVFEKPLVSRLPFEAEVDAGGLARKRVRIAATTTTETTRPPSPPAHEDLDVNTSENVETQHWWTREALQERHRGEEADSCSSSSAIAPVGADVGRGCWLGGRWGAREGSGRDTRGGTRPSMERVEPECPDKQAVSTAATGGAGPGRTLVQLKIDAMFAVPGLPCTPPSECSGRIANAELCDGECARTTCRGDGAMDVDVGVGAEPGEEGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCSACGVPHCSLCLAADYNSQFECYFCPSCYQDKRLECC 293
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BLAST of mRNA_Ecto-sp13_S_contig1728.5149.1 vs. uniprot
Match: D7G7W2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W2_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 6.700e-168
Identity = 247/292 (84.59%), Postives = 256/292 (87.67%), Query Frame = 0 
Query:    1 MAMSTTRKRGAFFVFEKPLVSRLPFEVEVDAGGLAKKRARIAXXXXXXXXXXXXXXAHEDLDVNTSENVETQQWWTREALQERHRGEEADSSSSSSPIAPVGADVERGCSLGGSWSATEGRRGTRGGTRQSLERVEPECLEKEALSTATTRGAGPGRTLVQLKIDAMFAVPGLPCTPPSECSGRNPDAKICDGDCAGTTSRGDGSMDVDVGVGAEPREEGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCSTCGVPHCSLCLAADYNSQFECYFCPPCYQDERLESC 292
            MAMSTTRKRGAFFVFEKPLVSRLPFEVEVD G LAKKRARIA  XXXXXXXXX   AHEDLDVNTSEN ET+QWWTREALQERHR            IA VGADVERGC  GG W A EGRR TR GTR SLE+ E ECL++EA+STA T GAG GRTLVQLKIDAMFAVPGLPCTPPSECSGRNPDA++CDG+CAGTTSRGDG+MDVDVGVGAEPREEGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCS C VPHCSLCLAADYNSQFECYFCPPCYQDERLESC
Sbjct:    1 MAMSTTRKRGAFFVFEKPLVSRLPFEVEVDGGVLAKKRARIAATXXXXXXXXXSPPAHEDLDVNTSENFETKQWWTREALQERHRXXXXXXXXXXXAIAAVGADVERGCWSGGIWGAREGRRDTRAGTRPSLEKGERECLDEEAVSTAATGGAGAGRTLVQLKIDAMFAVPGLPCTPPSECSGRNPDAELCDGECAGTTSRGDGAMDVDVGVGAEPREEGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCSACEVPHCSLCLAADYNSQFECYFCPPCYQDERLESC 292
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1728.5149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LJI1_9PHAE2.180e-17182.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7W2_ECTSI6.700e-16884.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022773SivaPFAMPF05458Sivacoord: 223..283
e-value: 3.8E-8
score: 33.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1728contigEcto-sp13_S_contig1728:12783..15062 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1728.5149.1mRNA_Ecto-sp13_S_contig1728.5149.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1728 11759..15062 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1728.5149.1 ID=prot_Ecto-sp13_S_contig1728.5149.1|Name=mRNA_Ecto-sp13_S_contig1728.5149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp
MAMSTTRKRGAFFVFEKPLVSRLPFEVEVDAGGLAKKRARIAATTTTEST
RPPPPPAHEDLDVNTSENVETQQWWTREALQERHRGEEADSSSSSSPIAP
VGADVERGCSLGGSWSATEGRRGTRGGTRQSLERVEPECLEKEALSTATT
RGAGPGRTLVQLKIDAMFAVPGLPCTPPSECSGRNPDAKICDGDCAGTTS
RGDGSMDVDVGVGAEPREEGGPACYACRGALGTAGGDILCSFCDRAACQA
CWQRCSTCGVPHCSLCLAADYNSQFECYFCPPCYQDERLESC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022773Siva