prot_Ecto-sp13_S_contig1727.5138.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1727.5138.1
Unique Nameprot_Ecto-sp13_S_contig1727.5138.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length551
Homology
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI)

HSP 1 Score: 556 bits (1432), Expect = 1.840e-192
Identity = 422/551 (76.59%), Postives = 429/551 (77.86%), Query Frame = 0
Query:    1 MDATCWMCQRCGHEVPIDNREVHEAQCRRNSPARLLSPQAAAARPVKDSPPSPFDPDDLPVSRNVFTPAQPPAAEAAAPTPSQPWREVDIRAAVASSANRTARAAAVTXXXXXXXXXXXXXXXXXXXXXXQVQEWEQRQDWERSFTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSTEGEGKSGDITTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDQGLLDGRSTVSGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGGFSDEPGAGXXXXXXXXXXXXXXXXXXXXXXRRPRRR-QVSSVEFARGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGGXXXXXXXSSIYEGILRQLAEAHNHDAAGGDAAXXGGASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKFRVD 550
            MDATCW+CQRCGHEVPIDNREVHEAQCRRNSPA+LLSP      PV  SPPSPFDPD+ P SRNVFTPAQPPAAEAAA    QP          AS                                                                         XXXXXXXX  STEGEG+SGD TTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DQGLLDGR+T+SGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGG SDEPGAGXXXXXXXXXXXXXXXXXXXXXX       QVSS EF RGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGGXXXXXXXSSIY GILRQLAEA NHDAAGGDA XX G SPASARAIAALPGE LTAGALAHLKDDGRQCCICLEDFEAGE+ATRLPCLHLYH VCIENWLQTSGTCPQCKFRVD
Sbjct:    1 MDATCWVCQRCGHEVPIDNREVHEAQCRRNSPAQLLSPP-----PVTGSPPSPFDPDNQPFSRNVFTPAQPPAAEAAARESGQPCGFAAAGRGAASX------------------------------------------------------------------------XXXXXXXXXXSTEGEGESGD-TTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGGLSDEPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSSFEFVRGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGGXXXXXXXSSIYAGILRQLAEAQNHDAAGGDAXXXXGTSPASARAIAALPGEALTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFRVD 473          
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: A0A6H5L176_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L176_9PHAE)

HSP 1 Score: 503 bits (1295), Expect = 9.080e-170
Identity = 429/635 (67.56%), Postives = 438/635 (68.98%), Query Frame = 0
Query:    1 MDATCWMCQRCGHEVPIDNREVHEAQCRRNSPARLLSPQAAAARPVKDSPPSPFDPDDLPVSRNVFTPAQPPAAEAAAPTPSQPWREVDIRAAVASSANRTARAAAVTXXXXXXXXXXXXXXXXXXXXXXQVQEWEQRQDWERSFTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------ASSTEGEGKSGDITTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDQGLLDGRSTVSGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGGFSDEPGAGXXXXXXXXXXXXXXXXXXXXXXRRPRRRQVSSVEFARGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGGXXXXXXXSSIYEGILRQLAEAHNHDAAGGDAAXXGGASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKFRVD 550
            MDAT WMCQRCGHEVPIDNREVHEAQCRRNSPARLLSP AAAARPV  S PSPFDPDDLPVSRNVFTPAQPPAAEAAAPTPSQPWREVDIRAA AS            XXXXXXXXXXXXXXXXXXX   QVQEWEQRQDWERSFTSS            XXXXXXXXXXX XXXXX                                                                                     ASSTEGEGKSG+ TTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EDDQGLLDGRST+SGAAAGSAI           QP                      AALGG S+EPGAG   XXXXXXXXXXXXXXXXXX RR  RRQVSSVEF RGPTARVRRGRD VSE+ESLMLAR L+A                            ILR+LAEAHNHDAAGG   XX  ASPASARAIAALPGETLTAG+LAHLKDDGRQCCICLE+FEAGERATRLPCLHLYH+VCIENWLQTSGTCPQCKFRVD
Sbjct:    1 MDATYWMCQRCGHEVPIDNREVHEAQCRRNSPARLLSPSAAAARPVTGSLPSPFDPDDLPVSRNVFTPAQPPAAEAAAPTPSQPWREVDIRAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRQVQEWEQRQDWERSFTSSSPTDASSDSGFAXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASSTEGEGKSGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EDDQGLLDGRSTISGAAAGSAIXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXXAALGGLSNEPGAGGDSXXXXXXXXXXXXXXXXXXFRRQWRRQVSSVEFVRGPTARVRRGRDAVSEVESLMLAR-LDAR---------------------------ILRRLAEAHNHDAAGGXXXXXXXASPASARAIAALPGETLTAGSLAHLKDDGRQCCICLEEFEAGERATRLPCLHLYHSVCIENWLQTSGTCPQCKFRVD 606          
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: A0A0L0FCC5_9EUKA (RING-type domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCC5_9EUKA)

HSP 1 Score: 94.4 bits (233), Expect = 1.970e-19
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0
Query:  482 IAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKFRVD 550
            I ALP ETL+  A+A L++  + CCICLEDF+AGE+  RLPCLH YH+ CI+ WL   GTCP CK  ++
Sbjct:   54 IHALPTETLSKAAIAKLEEGSQNCCICLEDFKAGEKMKRLPCLHTYHDHCIDEWLSRRGTCPVCKHALE 122          
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: A0A8J6CPI3_9ROSI (RING-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CPI3_9ROSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.870e-13
Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 0
Query:  473 GASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKF 547
            G +PAS  +I A+PG          ++  G+ CCICLE+FE  E    +PC H++H+ CIE WL+  GTCP C+F
Sbjct:   33 GPAPASKASIEAMPG--------IKVEKSGKDCCICLEEFEVDEEGREMPCKHVFHSGCIEKWLEIHGTCPICRF 99          
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: A0A7S4MPT7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MPT7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.730e-13
Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0
Query:  466 GDAAXXGGASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKFRVD 550
            GD +   GA PA    ++ALP  T+       L +D RQC ICLEDF  G+    LPCLH +H  CI+ WL+ + TCP CK  VD
Sbjct:   67 GDGSENRGADPA---VMSALPTATI-GDPTKDLPEDRRQCSICLEDFATGDERKTLPCLHGFHEECIDRWLEGNATCPVCKHAVD 147          
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: A0A6A2ZT57_HIBSY (Putative Ribosomal protein L34e superfamily protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZT57_HIBSY)

HSP 1 Score: 77.4 bits (189), Expect = 5.120e-13
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0
Query:  465 GGDAAXXGGASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKF 547
            G DA    GA+PAS  +I A+P           +K+ GR C ICLE+F   E A  +PC H++H+ CI+ WLQ  G+CP C+F
Sbjct:   25 GADAGNKPGAAPASKASIEAMP--------KIKVKESGRDCSICLEEFGVDEEAREMPCKHVFHSGCIQKWLQIHGSCPICRF 99          
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: A0A7S2I4A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I4A8_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 7.650e-13
Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 0
Query:  474 ASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKFRV 549
            A PAS +AI  LP  ++T   L  + ++ R+CCICL++   G+R TRLPC H++H  CI +WL  S TCP C++ +
Sbjct:   61 APPASKKAILQLPTVSVTPEDL--VDENNRECCICLDENNLGDRVTRLPCAHIFHQKCIYDWLLKSCTCPVCRYEL 134          
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: A0A4D9BPB7_SALSN (RING-type domain-containing protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BPB7_SALSN)

HSP 1 Score: 77.8 bits (190), Expect = 8.030e-13
Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 0
Query:  473 GASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKFRV 549
            G  PAS  AI A+    +  G     ++ G QC ICLED+EAGE+A R+PC H +H  CIE WL+  G+CP C++ +
Sbjct:   87 GRPPASKAAIDAMETVEVVVGE----EEGGDQCVICLEDWEAGEKAKRMPCKHTFHGECIEKWLKIDGSCPVCRYEM 159          
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: A0A2P5YC45_GOSBA (RING-type domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A2P5YC45_GOSBA)

HSP 1 Score: 76.6 bits (187), Expect = 1.090e-12
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0
Query:  476 PASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKF 547
            PAS  +I A+P           +++ G+ CCICLE+FE  E    +PC HL+H+ CIE WL+  GTCP C+F
Sbjct:   36 PASKASIKAMP--------RIQVEESGKDCCICLEEFEVDEEGRAMPCKHLFHSGCIEKWLEIHGTCPICRF 99          
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Match: A0A2P6R2V5_ROSCH (Putative aminoacyltransferase, E1 ubiquitin-activating enzyme n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R2V5_ROSCH)

HSP 1 Score: 77.0 bits (188), Expect = 1.930e-12
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:  476 PASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKFRV 549
            PAS  +IAA+P  T+         + GR+C ICL+ FE G  A  +PC HL+H  C+E WL+  GTCP C+F +
Sbjct:   92 PASKASIAAMPTVTVA--------ESGRECPICLDQFEVGGEAKEMPCSHLFHGDCVEKWLKVHGTCPVCRFTM 157          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1727.5138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR18_ECTSI1.840e-19276.59RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L176_9PHAE9.080e-17067.56RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0L0FCC5_9EUKA1.970e-1956.52RING-type domain-containing protein (Fragment) n=1... [more]
A0A8J6CPI3_9ROSI1.870e-1344.00RING-type domain-containing protein n=1 Tax=Gossyp... [more]
A0A7S4MPT7_9STRA4.730e-1345.88Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6A2ZT57_HIBSY5.120e-1343.37Putative Ribosomal protein L34e superfamily protei... [more]
A0A7S2I4A8_9STRA7.650e-1344.74Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A4D9BPB7_SALSN8.030e-1345.45RING-type domain-containing protein n=1 Tax=Salvia... [more]
A0A2P5YC45_GOSBA1.090e-1244.44RING-type domain-containing protein n=4 Tax=Gossyp... [more]
A0A2P6R2V5_ROSCH1.930e-1244.59Putative aminoacyltransferase, E1 ubiquitin-activa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..138
NoneNo IPR availableGENE3D2.20.28.140coord: 187..232
e-value: 3.1E-6
score: 28.8
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 495..549
NoneNo IPR availablePANTHERPTHR45977:SF4TARGET OF ERK KINASE MPK-1coord: 495..549
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 500..549
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 504..546
e-value: 0.0086
score: 7.7
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 192..216
e-value: 0.0029
score: 26.8
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 194..213
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 505..545
e-value: 2.5E-7
score: 40.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 504..546
e-value: 4.2E-12
score: 46.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 505..546
score: 11.914
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 468..550
e-value: 7.9E-19
score: 69.1
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 192..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1727contigEcto-sp13_S_contig1727:3851..6967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1727.5138.1mRNA_Ecto-sp13_S_contig1727.5138.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1727 3786..8761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1727.5138.1 ID=prot_Ecto-sp13_S_contig1727.5138.1|Name=mRNA_Ecto-sp13_S_contig1727.5138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=551bp
MDATCWMCQRCGHEVPIDNREVHEAQCRRNSPARLLSPQAAAARPVKDSP
PSPFDPDDLPVSRNVFTPAQPPAAEAAAPTPSQPWREVDIRAAVASSANR
TARAAAVTSAEERERRQQEQLQQRQQRLRRQVQEWEQRQDWERSFTSSSS
TDASSDSGFAAAGRGAAAAAAATGARGASSTEGEGKSGDITTTWACAACT
YLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGGGGSDGRRRRHAGAAG
DLESAAEEARCRMLAGAAAARDRNGVSTSGGGSGGRGGEDDQGLLDGRST
VSGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGG
FSDEPGAGGSGGSGGSSGGGGGARSSDDDFRRPRRRQVSSVEFARGPTAR
VRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGGGAGAGAGSSIYEG
ILRQLAEAHNHDAAGGDAAAGGGASPASARAIAALPGETLTAGALAHLKD
DGRQCCICLEDFEAGERATRLPCLHLYHNVCIENWLQTSGTCPQCKFRVD
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001876Znf_RanBP2
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR036443Znf_RanBP2_sf