mRNA_Ecto-sp13_S_contig1726.5129.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: D8LFU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFU7_ECTSI) HSP 1 Score: 482 bits (1241), Expect = 9.400e-169 Identity = 269/288 (93.40%), Postives = 275/288 (95.49%), Query Frame = 1
Query: 103 MIYLDLVASTAQLLPYFQAAGARPGSGAGDEGGAEEVAGTSGGAGFAGFVLRLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAAASAGKDTLGGGEEDALHNRGRPPPGSDAGSSSLGSSEGGSIHESVNGLDQKNLQEEQQQRRGTSSVPTANKIFVFQDGTFQAR 966
MIYLDLVASTAQLLPYFQAAGA PGSGAGD+GGAEEVAGTSGGAGFA FVLRLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDL VVS CLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSAD+AHNLTRDTLRLAEK DLDIDRRRLQETLRRE EARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAAASAGKDT+GGGEEDALHNRG+PP GSD GSSSLGSSEGGSIHESVNGLDQ QEEQQ+R+GTSSVPTANKIFVFQDGTFQAR
Sbjct: 1 MIYLDLVASTAQLLPYFQAAGAGPGSGAGDKGGAEEVAGTSGGAGFAAFVLRLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLFVVSLCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADDAHNLTRDTLRLAEK---DLDIDRRRLQETLRREAEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAAASAGKDTVGGGEEDALHNRGQPPAGSDTGSSSLGSSEGGSIHESVNGLDQTIPQEEQQRRKGTSSVPTANKIFVFQDGTFQAR 285
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: A0A835YTE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTE1_9STRA) HSP 1 Score: 137 bits (345), Expect = 5.370e-35 Identity = 95/231 (41.13%), Postives = 129/231 (55.84%), Query Frame = 1
Query: 292 FTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAAASAGKDTLGGGEEDALHNRGRPPPGSDAGSSSLGSSEGGSIHESVNGLDQKNLQEEQQQRRGTSSVPT------ANKIFVFQDGTFQAR 966
FTI FA+E+++LLAAFR KF H GY+LDL +V+ CL++E+ G K +RLLG R WRV R++NTL+ A E + D A++ +++ DRRRL E LR E EARK + ML GYK+E ETL EAL IAAMDIA AAAS D G G + + + P +HE +RRGT+S ++IFV +DG++ +R
Sbjct: 3 FTIFFFALELLVLLAAFRRKFLLHLGYMLDLAIVAACLWRELQGGSKELRLLGYCRGWRVVRLVNTLVEQAQERASRAADREAEAQRRAIEVEADRRRLAEALRLEREARKNTETMLLGYKEEAETLREALNIAAMDIAEAAAS---DLEGDGSDGSASDESSP------------------MHED--------------KRRGTASKADRLGDDRGDRIFVSEDGSWTSR 198
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: A0A7S2BNW9_9STRA (Voltage-gated hydrogen channel 1 n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNW9_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.720e-34 Identity = 91/218 (41.74%), Postives = 130/218 (59.63%), Query Frame = 1
Query: 64 FVELYEVQVAVVAMIYLDLVASTAQLLPYFQAAGARPGSGAGDEGGAEEVAGTSGGAGFAGFVLRLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAA 717
F E +EVQ+ + +I LD+ + LL G P S +G A VLR++ ++FTGFT+ F +E+ L+ AFR FF H G ILDL +V+ CL E+ G+ + +RLLG LR WRV R++NTLL + + T+D + ++ ++ RL++ LRRE++++KRV+ MLR YKDEVETLNEALKIAA+DIA AA
Sbjct: 84 FFESFEVQLVTLILIALDVALAVTSLL---LTCGNAPAS-----------------SGLALAVLRVI----ETFTGFTVFYFLLELGALMFAFRSAFFGHIGNILDLAIVATCLVWEVDGRSRAIRLLGVLRFWRVMRLVNTLLTTKETKLQETKDAWDTDLQILEETRVEIARLEDNLRRELDSKKRVETMLRSYKDEVETLNEALKIAALDIAQAA 277
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: A0A7S2A8Z7_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z7_TRICV) HSP 1 Score: 132 bits (333), Expect = 1.210e-32 Identity = 88/223 (39.46%), Postives = 129/223 (57.85%), Query Frame = 1
Query: 52 NLGRFVELYEVQVAVVAMIYLDLVASTAQLLPYFQAAGARPGSGAGDEGGAEEVAGTSGGAGFAGFVLRLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEI-SGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAA 717
+LGR +E EVQ+ A+IYLDL+AST +++ +A + DEG + ++SFT FT+ F IE+ L+ AF + F H GY+ D++++ CL E+ S + K +RLLG LR+WR AR+++T L A + HN T+ L+ A++ + L L+E E+E RK V+KML+GYK+EVE L EALKIAA D+A AA
Sbjct: 6 SLGRLLEQQEVQLITTALIYLDLIASTFRIVLQGKANFTEDENHRPDEGS------------------ESIHWLIRSFTSFTLFFFMIEIASLIFAFGTRCFWHLGYVADIIIIMLCLSSELTSSESKAIRLLGFLRIWRFARLVSTTLDMAQDQHNATKSCLQEAQQHGEKLRAKVSFLEERNMNEIEHRKEVEKMLQGYKEEVEMLGEALKIAAFDVAGAA 210
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: A0A2P4YCG1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCG1_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.240e-32 Identity = 76/158 (48.10%), Postives = 108/158 (68.35%), Query Frame = 1
Query: 241 AGFVLRLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAA 714
A ++R+ +R ++SFTGFT+ LF IE+V+LLAAFR KFF HAGY++DL+VVS L E+ + K RLLG LRVWRV R++ LL AH+ TR L + + + + E+L+RE E+R+ ++++LRGYKDE+ TL EAL+IAA +A A
Sbjct: 45 ASLLVRVATRLVESFTGFTLFLFLIELVILLAAFRHKFFAHAGYVVDLVVVSLSLAVELYAQTKVARLLGILRVWRVLRLVGKLLDQERAAHDTTRLLLEQEQLKLLHVRMQKDAAHESLKREYESREGIEQLLRGYKDEIVTLKEALQIAAQAVAEA 202
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: A0A7S2W125_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W125_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.870e-31 Identity = 83/224 (37.05%), Postives = 127/224 (56.70%), Query Frame = 1
Query: 46 AANLGRFVELYEVQVAVVAMIYLDLVASTAQLLPYFQAAGARPGSGAGDEGGAEEVAGTSGGAGFAGFVLRLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAA 717
A G F E +++QV + I++D+ A+TA + SG A V +QS GFTI F +E+ L AF+ +F HAG ++D+ VV+ + E+ G + VR+LG LRVWR+ R++NT++ + D+ + R+ + + ++ I RL++++RRE +A+KRV+ ML+ YKDEVETLNEALKIAA+DIAAAA
Sbjct: 48 AQEAGNFFESFDIQVLTLCFIFVDVAAATA-------------------------LVALSGEESLASSTTAAVLNVIQSLMGFTIFYFILELAALAWAFKTRFLTHAGILVDMGVVACAVLAEVQGTSRIVRVLGVLRVWRLMRLINTVMATKDKEIDSIREEWQADQARLEESQITISRLEDSIRREGDAKKRVEDMLKSYKDEVETLNEALKIAALDIAAAA 246
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: A0A329SGB6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SGB6_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.260e-30 Identity = 73/155 (47.10%), Postives = 105/155 (67.74%), Query Frame = 1
Query: 250 VLRLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAA 714
++R+++R ++SFTGFT+ LF IE+ +LLAAFR KFF HAGY+LDL VVS L E+ + K RLLG LRVWRV R++ ++ AH+ TR L + + + + E+L+RE E+R ++++LR YKDE+ TL EAL+IAA +AAA
Sbjct: 131 LVRVITRLVESFTGFTLFLFLIELAVLLAAFRHKFFAHAGYVLDLTVVSVSLAVELYAQTKVARLLGILRVWRVLRLVRRIVDQERAAHDTTRQLLEQEQLKLLHVRMQKDAAHESLKREYESRAGLEQLLRSYKDEIVTLKEALQIAAQAVAAA 285
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: A0A3F2RQZ6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQZ6_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.300e-30 Identity = 73/161 (45.34%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 250 VLRLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAAASAGK 732
++R+ +R ++SF GFT+ LF IE+ +LLAAFR+KFF HAGY+LDL+VVS L E+ + K VRLLG LR+WRV R++ L+ AH+ T L + + + + QE+L+RE E+R+ ++++LR YKDE+ TL EAL+IAA +A A G+
Sbjct: 160 LMRIATRLVESFMGFTLFLFLIELAVLLAAFRQKFFAHAGYVLDLMVVSVSLTVELYAQTKAVRLLGVLRIWRVLRMVRRLIDRERRAHDATHLLLEQEQVRLIHVRMQKNASQESLKREYESREGLEQLLRSYKDEIMTLKEALQIAAQAVAKATVDKGE 320
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: G4ZTH7_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZTH7_PHYSP) HSP 1 Score: 127 bits (318), Expect = 4.320e-30 Identity = 76/163 (46.63%), Postives = 106/163 (65.03%), Query Frame = 1
Query: 241 AGFVL-RLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAAASA 726
AG VL R+ +R ++SFTGFT+ LF IE+ +LLAAFR +FF HAGY+LD VV L E+ + K VRLLG LRVWRV R++ L+ AH+ TR L + + + + E+L+RE E+R ++++LR YKDE+ TL EAL+IAA +A A +A
Sbjct: 45 AGSVLARIATRLVESFTGFTLFLFLIELAVLLAAFRRQFFAHAGYVLDTAVVGVSLAMELYAQSKAVRLLGILRVWRVLRLVRRLVDQERAAHDATRILLEQEQLKLLHVRMQKDAAHESLKREYESRAGLEQLLRSYKDEIVTLKEALQIAAQAVAEATMTA 207
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Match: D0NQR1_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NQR1_PHYIT) HSP 1 Score: 126 bits (316), Expect = 7.120e-30 Identity = 74/160 (46.25%), Postives = 104/160 (65.00%), Query Frame = 1
Query: 256 RLVSRFMQSFTGFTIILFAIEMVMLLAAFREKFFRHAGYILDLLVVSFCLYQEISGKGKGVRLLGALRVWRVARVMNTLLLSADEAHNLTRDTLRLAEKSTQDLDIDRRRLQETLRREVEARKRVDKMLRGYKDEVETLNEALKIAAMDIAAAAASAGKD 735
R+V+R ++SFTGFT+ LF IE+ +LLAA R KFF HAGY+LDL VVS + E+ + K VRLLG LRVWRV R++ L+ AH+ TR L + + + + QE+L+ E E+R ++++LR YKDE+ TL EAL+IAA +A A + D
Sbjct: 47 RVVTRLVESFTGFTLFLFLIELAVLLAALRRKFFAHAGYVLDLAVVSVSVTVELYAQTKAVRLLGILRVWRVLRLVRHLVDQERAAHDATRQLLEQEQLKLLHVRMQKEAAQESLKCEYESRAGLEQLLRVYKDEIVTLKEALQIAAQAVAEATMAESSD 206 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1726.5129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1726.5129.1 >prot_Ecto-sp13_S_contig1726.5129.1 ID=prot_Ecto-sp13_S_contig1726.5129.1|Name=mRNA_Ecto-sp13_S_contig1726.5129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp MIYLDLVASTAQLLPYFQAAGARPGSGAGDEGGAEEVAGTSGGAGFAGFVback to top mRNA from alignment at Ecto-sp13_S_contig1726:3..2925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1726.5129.1 ID=mRNA_Ecto-sp13_S_contig1726.5129.1|Name=mRNA_Ecto-sp13_S_contig1726.5129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2923bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1726:3..2925+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1726:3..2925+ >mRNA_Ecto-sp13_S_contig1726.5129.1 ID=mRNA_Ecto-sp13_S_contig1726.5129.1|Name=mRNA_Ecto-sp13_S_contig1726.5129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1726:3..2925+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |