mRNA_Ecto-sp13_S_contig1725.5123.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: D7G4S4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S4_ECTSI) HSP 1 Score: 467 bits (1202), Expect = 8.960e-166 Identity = 243/255 (95.29%), Postives = 249/255 (97.65%), Query Frame = 1
Query: 1 MRTVSTFAVAALAGTSSVVAFAPPSAPLRSVNTRSSSGAALKMVYIPDGLSPAEWKKIKDADKKKQENLGKMGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAAGGYKKEQSVSIFGGTPLPWVSGAAQKSPGVEMDNKRRINEQKKVKRAATNAPMSAAVKRRVEKEAAEERRKQEKLKKQLDGEKKGPFGLW 765
MRTVSTFAVAALAGTSSVVAFAPPSAPLR V TRSSS AALKMVYIPDGLSPAEWKKIKDADKKKQENLGK+GPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMR+RKDKVVLN+KVSK VKQKAWS TDKAYAAGGYKKEQSVSIFGGTPLPWVSGAAQKSPGVE+DNKRRINEQKKVKRAATNAPMSAAVKRRVEKEAAEERRKQEKLKKQL+GEKKG FG+W
Sbjct: 1 MRTVSTFAVAALAGTSSVVAFAPPSAPLRPVTTRSSSSAALKMVYIPDGLSPAEWKKIKDADKKKQENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRARKDKVVLNNKVSKGVKQKAWSSTDKAYAAGGYKKEQSVSIFGGTPLPWVSGAAQKSPGVEVDNKRRINEQKKVKRAATNAPMSAAVKRRVEKEAAEERRKQEKLKKQLNGEKKGLFGMW 255
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: A0A7S2US33_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US33_9STRA) HSP 1 Score: 173 bits (438), Expect = 3.540e-50 Identity = 89/147 (60.54%), Postives = 103/147 (70.07%), Query Frame = 1
Query: 121 LKMVYIPDGLSPAEWKKIKDADKKKQENLGKMGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAAGGYKKEQSVSIFGGTPLPWVSG 561
L+M Y+P+GL+P +WKKI++ DK K NLG+MGP RFKSRSF AWQ +G HLFPVDPKKVK+GEI M VPYMQRGGAWDNSDL KKG+ A KV WS DK YAAGG++KEQSVSIFGG +PW G
Sbjct: 38 LRMGYVPEGLTPEQWKKIQEKDKAKG-NLGEMGPKRFKSRSFAAWQAAGGKHLFPVDPKKVKTGEIAMKDVPYMQRGGAWDNSDLI-KKGEKA-----------PKVE-------WSDRDKQYAAGGFRKEQSVSIFGGVSMPWTQG 164
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: A0A836CGF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF0_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.310e-48 Identity = 108/227 (47.58%), Postives = 141/227 (62.11%), Query Frame = 1
Query: 70 PSAPLRSVNTRSSSGAALKMVYIPDGLSPAEWKKIKDADKKK-QENLGKMGPSRFKSRSFQAWQES----GAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAAGGYKKEQSVSIFG-GTPLPWVSGAAQKSPGVEMDNKRRINEQKKVKRAAT-NAPMSAAVKRRVEKEAAEERRKQEKLKKQ 729
PSA L + R ++ ++L M YIPDGL+P +WK IK+ +++K +NLG++G + FKSRSFQAWQE+ GHLFPVDP KVK GEIP+ KVPYMQRGG+WD+ DL K+ K +K+K WSP DKAYA GG + QS++IFG G LPW AA K P +D + EQ K KRA + AP + RVEKE A + + E+LKK+
Sbjct: 22 PSAALPAALARPAT-SSLSMAYIPDGLTPEQWKVIKEKEQEKASKNLGRVGATSFKSRSFQAWQEAMERGEGGHLFPVDPVKVKRGEIPLSKVPYMQRGGSWDDEDLVKKE-------------------KGIKKKEWSPLDKAYATGGERANQSINIFGRGANLPWNGRAAFKDPKA-IDP---LKEQAKWKRATSVTAPPNKMALARVEKEKA--KLEAERLKKE 222
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: A0A835ZE56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE56_9STRA) HSP 1 Score: 159 bits (403), Expect = 9.610e-45 Identity = 106/239 (44.35%), Postives = 147/239 (61.51%), Query Frame = 1
Query: 34 LAGTSSVVAFAPPSAPLRSVNTRSSSGAALKMVYIPDGLSPAEWKKIKDADKKK-QENLGKMGPSRFKSRSFQAWQ---ESG-AGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAAGGYKKEQSVSIFG-GTPLPWVSGAAQKSPGVEMDNKRRINEQKKVKRAATNAPMSAAVKRRVEKEAAEERRKQEKLKKQL 732
LA ++ +AFAP +A + + ++S + M YIPDGL+ A+W IK+ ++ K +NLG++G + FKSRSFQAWQ E+G GHLFPVDP+KVK+GEI + +VPYMQR G+WD+ DL K+ K +++KAW+PTDKAYA GG + +QSV+IFG G LPW AA K P +D I EQ K +RA + P + RV KE A+ +Q K +K+L
Sbjct: 15 LALVNATLAFAPGAA----LPSCATSTCQVTMRYIPDGLTQAQWDAIKEKEQAKASKNLGRVGATSFKSRSFQAWQQAMENGEGGHLFPVDPRKVKTGEIKLSEVPYMQRRGSWDDEDLLKKE-------------------KGIQKKAWTPTDKAYADGGERAQQSVNIFGTGANLPWNGRAAFKDP-TAVDP---IKEQAKWRRATSPLPPNKMALERVAKEKAKLAAQQAKKEKEL 226
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: A0A6S9GSP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GSP2_HETAK) HSP 1 Score: 147 bits (370), Expect = 5.970e-40 Identity = 87/175 (49.71%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 70 PSAPLRSVNTRSSSGAALKMVYIPDGLSPAEWKKIKDADKKKQENLGKMGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAAGGYKKEQSVSIFGGTPLPWVSGAAQKSPGVEMD 594
PSA SV R+ S +K Y+PDGLS ++ KIK + +K +NLGK+GP+RFKSRSF W +G HLFPVDP+KVKSGEI ++ VPYMQR GAWDNSDL KG +R DK LN + +K ++ Y GG++KEQSVSIFGG +PW QK +++D
Sbjct: 23 PSAQRLSV-VRNESNVQMKG-YVPDGLSAEQYAKIKKEEAEKLKNLGKVGPNRFKSRSFADWHAAGGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDL---KGNKNVR---DKNKLNVQKTK---------SEVEYEKGGFRKEQSVSIFGGRNMPWT----QKYEAMDVD 176
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: D7FWZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ5_ECTSI) HSP 1 Score: 139 bits (350), Expect = 3.830e-37 Identity = 74/130 (56.92%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 115 AALKMVYIPDGLSPAEWKKIKDAD---KKKQENLGKMGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAA 495
A L M Y+PDGLSP +WKK++ + KKK +LG++G FKSRS QAWQE GAGHLFPVDPKKVKSGEIP +K PYMQR GAWDNSDL K Q K WS TDKAYAA
Sbjct: 61 ADLDMKYVPDGLSPEQWKKMQKEEAEKKKKMGDLGQVGVKSFKSRSLQAWQEDGAGHLFPVDPKKVKSGEIPPEKTPYMQRKGAWDNSDLAKKNLQ----------------------KKWSATDKAYAA 168
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: A0A6U3BRN0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3BRN0_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.460e-32 Identity = 71/165 (43.03%), Postives = 95/165 (57.58%), Query Frame = 1
Query: 112 GAALKMVYIPDGLSPAEWKKIKDADKKK--QENLGKMGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAAGGYKKEQSVSIFG-GTPLPWVSGAAQKSP 579
G Y+PDG +P +KK K+A+ KK ++NLGK+GP FKSRSFQ++QE+ A HL PV ++VK GE+ + +PYMQRGG+WDNSD+ + K + K W +DK YA GGYKKEQSVS+ G G+ L W A+ P
Sbjct: 30 GLTRAYAYVPDGFTPESYKKFKEAEAKKLQKQNLGKLGPKGFKSRSFQSFQEALERGEADHLMPVFNAKERVKKGELRTEDIPYMQRGGSWDNSDVKNAKNK----------------------KRWLSSDKEYANGGYKKEQSVSVLGFGSGLDWTGKGARTGP 172
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: A0A1Z5KB69_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB69_FISSO) HSP 1 Score: 125 bits (314), Expect = 9.320e-32 Identity = 88/206 (42.72%), Postives = 115/206 (55.83%), Query Frame = 1
Query: 16 TFAVAALAGTSSVVAFAPPSAPLRSVNTRSSSGAALKMV--YIPDGLSPAEWKKIKDADKKKQE--NLGKMGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAAGGYKKEQSVSIFG-GTPLPWV-----SGAAQKSPGV 585
TFAVAA+A +S+ A A S + SS +L +V Y+PDG +P +KK K+ ++KK E NLG++GP FKSRSFQ++QE+ A HL PV ++VK GE+ + +PYMQRGG+WDNSD+ K K+ W +DK YA GGY KEQSVSIFG G L W SG A+ PG
Sbjct: 3 TFAVAAVALAASLGAEA------FSTGSLSSQRPSLTVVNGYVPDGFTPESYKKFKEEERKKNEKKNLGRVGPKGFKSRSFQSFQEALERGEATHLLPVMNAKERVKKGELKWEDIPYMQRGGSWDNSDV-----------------------KGAKKVRWLQSDKEYANGGYLKEQSVSIFGYGQGLDWTGTRSRSGPAESVPGA 179
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: A0A7S1D0M1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0M1_CYCTE) HSP 1 Score: 124 bits (311), Expect = 2.460e-31 Identity = 72/162 (44.44%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 133 YIPDGLSPAEWKKIKDADKKK--QENLGKMGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAAGGYKKEQSVSIFG-GTPLPWVSGAAQKSPGVEM 591
Y+P G +P ++KK K+ +KKK ++NLG++GP F+SRSFQ++QE+ A HL PV +KV GEI + VPYMQRGG+WDNSD+ K K+K W +DK+YA GGYKKEQSVSIFG G L W A+ P +
Sbjct: 60 YVPSGFTPEQYKKFKEEEKKKMQKQNLGRLGPKGFQSRSFQSFQEALERGEAKHLLPVFNAKEKVARGEIRPEDVPYMQRGGSWDNSDV-----------------------KGAKKKRWLSSDKSYADGGYKKEQSVSIFGYGEGLDWTGKNARTGPSESI 198
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Match: A0A835YZT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZT7_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.340e-29 Identity = 77/171 (45.03%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 64 APPSAPLRSVNTRSSSGAALKM-VYIPDGLSPAEWKKIKDADKKK-QENLGKMGPSRFKSRSFQAWQES----GAGHLFPVDPKKVKSGEIPMDKVPYM-QRGGAWDNSDLTSKKGQAAMRSRKDKVVLNDKVSKDVKQKAWSPTDKAYAAGGYKKEQSVSIFG-GTPLPW 552
AP SA LR+ SG +L+M YIPDGLS +W+ IK ++ K +NLG++G +FKSRSFQA+ +S GHLFPVD +KVKSGEI + +VPYM +R GAWD+SD+ K+ A K+K W P D AYA GG + QSV+++G +PW
Sbjct: 30 APASAALRN------SGPSLRMSTYIPDGLSLEQWQAIKQKEQAKASKNLGRVGTVKFKSRSFQAFHQSLEAGHGGHLFPVDLRKVKSGEIGLSQVPYMMRRRGAWDDSDMVDKEPGA-------------------KKKNWLPADVAYANGGERAAQSVNLYGTSVNMPW 175 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1725.5123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1725.5123.1 >prot_Ecto-sp13_S_contig1725.5123.1 ID=prot_Ecto-sp13_S_contig1725.5123.1|Name=mRNA_Ecto-sp13_S_contig1725.5123.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=256bp MRTVSTFAVAALAGTSSVVAFAPPSAPLRSVNTRSSSGAALKMVYIPDGLback to top mRNA from alignment at Ecto-sp13_S_contig1725:2978..5058- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1725.5123.1 ID=mRNA_Ecto-sp13_S_contig1725.5123.1|Name=mRNA_Ecto-sp13_S_contig1725.5123.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2081bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1725:2978..5058- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1725:2978..5058- >mRNA_Ecto-sp13_S_contig1725.5123.1 ID=mRNA_Ecto-sp13_S_contig1725.5123.1|Name=mRNA_Ecto-sp13_S_contig1725.5123.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=768bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1725:2978..5058- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |