mRNA_Ecto-sp13_S_contig17226.5111.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: D7FP73_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP73_ECTSI) HSP 1 Score: 613 bits (1581), Expect = 2.140e-220 Identity = 294/311 (94.53%), Postives = 302/311 (97.11%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQGLKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPHTFYFSLVGTGPKEEELLVTTADSNRTKRVSRVWARLRALGPGWKGLTTKLVYSALKRLHSWQVGAHASAIESRLGVAADSWSSAGDDGVLEGYTQSHPRIPEECEAPVR 933
RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWG+DNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGE ADTAPEVRL SHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQGLKDVALAV+GKSAIYSQPDNAAFDMTVQSAHRLNQEIQT+PHTFYFSLVGTGPKEE+LLVT D+ +TK V RVWARL +LGPGWKGL TKLVYSALKRLHSWQVGAHASAIESRLGVAADSWSSAGDDGVLEGYTQSHPR+PEECEAPVR
Sbjct: 61 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGKDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGERADTAPEVRLVSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQGLKDVALAVVGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTNPHTFYFSLVGTGPKEEDLLVTPTDTGQTKWVFRVWARLLSLGPGWKGLKTKLVYSALKRLHSWQVGAHASAIESRLGVAADSWSSAGDDGVLEGYTQSHPRVPEECEAPVR 371
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: A0A4D9CZC8_9STRA (Quinolinate synthase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZC8_9STRA) HSP 1 Score: 178 bits (452), Expect = 9.250e-47 Identity = 101/223 (45.29%), Postives = 130/223 (58.30%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRF--FDPRLSHFELSWRRRGWRQGLKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPHTFYFSLVGT----GPKEEE 651
R C+IFY+LKGG V YGQ H+ +GHA G GL W +P+H++GHS+GG T R+L H L F+ G TSA W+RSV+T N+P NG+ LVY LG V S GH L + H L DW L+R D L ++ LSWRR W+ GL+ + AVLG S + + DNAA+DMT+ +A N+ T PH FYFS VGT G +EEE
Sbjct: 625 RVCQIFYQLKGGRVHYGQAHAARYGHAAVGAENHRGLCPEWDAAHPIHLVGHSFGGLTVRLLVHYLDKQAFA--GHPSTSATWIRSVSTLNAPHNGTHLVYGLGADPACPRLVHWGSPGHALGMLAHVLAFWDWEGLRRGCGLDFALEYWGLSWRRGIWK-GLRRLGAAVLGLSNVCTTADNAAYDMTIHAALHYNRITCTYPHVFYFSFVGTRARHGEEEEE 844
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: A0A1Y1IA70_KLENI (Triacylglycerol Lipase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IA70_KLENI) HSP 1 Score: 167 bits (424), Expect = 1.770e-44 Identity = 106/305 (34.75%), Postives = 156/305 (51.15%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQGLKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPHTFYFSLVGTGPKEEELLVTTADSNRTKRVSRVWARLRALGPGWKGLTTKLVYSALKRLHSWQVGAHASAIESRLGVAADSWSSAGDDGVLEGYTQSHPRIPEE 915
RACE+FY++KGGTV YG+ HSRA GH +G+T+D G + W E++PVH +GHS G QT R+L +LA G F G +T+A WV SVT+ + LNG+ VY G +R S +L++ + LD LK+F+D HFELSW + G + + A+LG+ ++ D D+++QS+ RLN+ + T P TFYFS + +E+ + VW R+ +G L +L Y + W+ +DG L ++Q PRIPEE
Sbjct: 147 RACELFYQIKGGTVDYGEAHSRACGHKRYGKTWD-GFYPNWDENHPVHFVGHSSGAQTIRLLHTMLAEGEFE--GHPKTNAKWVLSVTSLSGSLNGTTRVYLDGLSFSDGTTLRHPSLLSVLAIGVVIFHWLDIDFLKKFYDFGFDHFELSWHQAG----VTGLLEALLGRRGPFAGTDWILPDLSIQSSARLNKRLATYPDTFYFSYATA--QTQEVFGRHVPAGSQVHPLFVW-RVLQIGSWTHPLNVRLPYEGYRDEDWWE-----------------------NDGALNTFSQMFPRIPEE 418
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: A0A7S0UEC0_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UEC0_HEMAN) HSP 1 Score: 162 bits (409), Expect = 2.610e-44 Identity = 90/213 (42.25%), Postives = 128/213 (60.09%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQG-LKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPH-TFYFSLVGT 633
RACE+F ++KGG V YG+EHS GHA +G Y+ GL+ W ++P+H++GHS GG T R+LQHLL G F G TSA WV S++T N+PLNGS + Y+LG +D + +VR S G LL +H L PLL+ +D + ++L W W G L +A A++G+S + DNAA+D +V + + N E+ T+Y S GT
Sbjct: 67 RACEVFAQIKGGVVDYGREHSERCGHARYGRCYE-GLYREWDAEHPIHLVGHSLGGTTGRMLQHLLHIGHFE--GHADTSADWVASLSTINAPLNGSPVAYALGLQSDGSSDVRALSCGWLLGRVVHVAGFLGVPLLR--YDIGMDQWQLGW----WHGGSLVRLASALVGRSPMVEGGDNAAYDCSVHAMRKWNAEMGPGHKGTYYMSFAGT 270
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: L1IA24_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IA24_GUITC) HSP 1 Score: 158 bits (400), Expect = 8.360e-44 Identity = 86/212 (40.57%), Postives = 127/212 (59.91%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQGLKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPHT-FYFSLVGT 633
RACE+FY++KGG V YG+EHS+ GHA +G Y GLFS W + P+H++GHS GG TAR LQHLL F PG + T A+W+ S+++ ++PLNG+L Y+LGE D P VR S G +L +H L + +L ++ L ++LS + G +K + +L S + + DNAA+D T+ + + N+ + +YFS VGT
Sbjct: 15 RACEVFYQIKGGKVDYGEEHSQRFGHARYGRLYP-GLFSEWSSERPIHMLGHSLGGATARYLQHLLEARAF--PG-HATDASWILSLSSLSAPLNGTLTTYALGEEEDAPPRVRRLSPGSILGSLVHVLAMCGGRMLG--YELGLEQWKLSMKDVGAGAAIKKLVRCLLVHSDLVEEEDNAAYDTTIHAMKKHNESMGGGHGCCYYFSFVGT 220
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: F2EFR0_HORVV (Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2EFR0_HORVV) HSP 1 Score: 153 bits (387), Expect = 1.750e-39 Identity = 103/306 (33.66%), Postives = 147/306 (48.04%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQGLKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPHTFYFSLVGTGPKEEELLVTTADSNRTKRVSRVWARLRALGPGWKGLTTKLVYSALKRLHSWQVGAHASAIESRL-GVAADSWSSAGDDGVLEGYTQSHPRIPEE 915
RA E+FY LKGG V YG+EHSR +GH+ G YD G + W E++P H +GHS G Q R+LQ +L F G TS WV SVT+ + LNGS Y G + +R + V LD P L+R++D HF +S R G+ ++ + G S ++ D D+T+QSA R+N +++T PHTFYFS + RT ++ V P LV+ + +L W+ H +A E G + W +DG L ++ +HPRIP E
Sbjct: 112 RARELFYYLKGGRVDYGEEHSRTYGHSRFGRAYDRGHYPMWDEEHPAHFVGHSAGAQVIRLLQQMLHDKAFD--GYENTSENWVLSVTSLSGVLNGSTTAYLGGIRPEDGRSIRFICLAQVYRVGTIIYHWLDIPWLRRYYDFGFDHFGMSRRA----VGVSGLSSLLAGASGPFATGDWILPDLTIQSAARMNADVRTFPHTFYFSYA---------------TRRTTKLCGVTV------PSGVMRIHPLVFIHVMQLCRWR---HFAAAEPPCKGYRDEDWED--NDGALNTFSMTHPRIPVE 385
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: UPI00053C74CF (uncharacterized protein LOC104809584 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C74CF) HSP 1 Score: 152 bits (383), Expect = 7.660e-39 Identity = 99/305 (32.46%), Postives = 148/305 (48.52%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQGLKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPHTFYFSLVGTGPKEEELLVTTADSNRTKRVSRVWARLRALGPGWKGLTTKLVYSALKRLHSWQVGAHASAIESRLGVAADSWSSAGDDGVLEGYTQSHPRIPEE 915
RA E+F+ LKGG V +G+EHSRA GHA G Y+ G + W ED+P+H +GHS G Q RVLQ +LA F G T WV SVT+ + NG+ Y G + ++ L V + + LD P LK +++ HF LSW++ G+R GL D +LG + ++ D D+T+Q + RLN + T P+TFYFS + RT+R+ + LG +++ + ++ W+ S G + W +DG L + +HPR+P E
Sbjct: 115 RARELFFYLKGGQVDFGEEHSRACGHARFGRVYEQGQYPEWDEDHPIHFVGHSAGAQVVRVLQQMLADKAFE--GYENTDENWVLSVTSLSGAFNGTTRTYLDGMRPEDGMSMKPICLLQLCRVGVIMYDWLDIPWLKSYYNFGFDHFNLSWKKTGFR-GLVDC---LLGNAGPFASNDWILPDLTIQGSTRLNSYLHTFPNTFYFSYA---------------TKRTRRMMGITVPSGVLG------IHPMLFLRVFQMSRWKFPQDVS--PPYKGYRDEEWQE--NDGALNTISMTHPRLPVE 388
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: A0A6A2ZLZ1_HIBSY (Tryptophan aminotransferase 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZLZ1_HIBSY) HSP 1 Score: 151 bits (381), Expect = 1.370e-38 Identity = 83/208 (39.90%), Postives = 120/208 (57.69%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRG-WRQGLKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPHTFYFS 621
RA E+FY LKGG+V YG+EHS+A GH+ G Y+ G + W ED+P+H++GHS G Q ARVLQ +LA F TS WV S+T + NG+ Y G + + +R + + + LD PLLK +++ HF LSWR+ G W GL D +LG + ++ D D+T+Q + +LN+++QT P+TFYFS
Sbjct: 115 RARELFYYLKGGSVDYGEEHSKACGHSQFGRFYEQGHYPEWDEDHPIHIVGHSAGAQVARVLQQMLADKAFKD--HENTSENWVLSITALSGAFNGTTRTYLDGMLPEDGRNLRRICVMQFCRIGVVIYDWLDIPLLKTYYNFGFDHFNLSWRKVGLW--GLVDC---LLGNAGPWATGDWILPDLTIQGSMKLNRDLQTFPNTFYFS 315
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: A0A3B6ERN4_WHEAT (Uncharacterized protein n=4 Tax=Triticum TaxID=4564 RepID=A0A3B6ERN4_WHEAT) HSP 1 Score: 149 bits (376), Expect = 6.700e-38 Identity = 100/305 (32.79%), Postives = 143/305 (46.89%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQGLKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPHTFYFSLVGTGPKEEELLVTTADSNRTKRVSRVWARLRALGPGWKGLTTKLVYSALKRLHSWQVGAHASAIESRLGVAADSWSSAGDDGVLEGYTQSHPRIPEE 915
RA E+FY LKGG V YG+EHSRA+GHA G YD G + W E++P H +GHS G Q R+LQ +L F G TS WV SVT+ + LNGS Y G + + + V LD P LKR++D HF +SW G+ + + G S ++ D D+T+Q+A R+N +++T P+TFYFS + RT + V P LV+ + +L W+ H ++ + W +DG L ++ +HPRIP E
Sbjct: 113 RARELFYYLKGGRVDYGEEHSRAYGHARFGRAYDRGHYPMWDEEHPAHFVGHSAGAQVIRLLQQMLHDKAFD--GYENTSENWVLSVTSLSGVLNGSTTAYLGGIRPEDDRSMSFVCLAQIYRVGTTIYHWLDIPWLKRYYDFGFDHFGMSWHT----VGVSGLPSLLAGTSGPFATGDWILPDLTIQNATRMNADVRTFPNTFYFSYA---------------TRRTTKFCGVTV------PSGVMHIHPLVFIHVMQLCRWR---HFASEPPCKDYRDEDWED--NDGALNTFSMTHPRIPVE 385
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Match: A0A7N2LA18_QUELO (Uncharacterized protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2LA18_QUELO) HSP 1 Score: 147 bits (370), Expect = 5.280e-37 Identity = 96/305 (31.48%), Postives = 146/305 (47.87%), Query Frame = 1
Query: 1 RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIGHSYGGQTARVLQHLLATGFFSKPGEYQTSAAWVRSVTTCNSPLNGSLLVYSLGEMADTAPEVRLTSHGHLLSVAIHALELLDWPLLKRFFDPRLSHFELSWRRRGWRQGLKDVALAVLGKSAIYSQPDNAAFDMTVQSAHRLNQEIQTDPHTFYFSLVGTGPKEEELLVTTADSNRTKRVSRVWARLRALGPGWKGLTTKLVYSALKRLHSWQVGAHASAIESRLGVAADSWSSAGDDGVLEGYTQSHPRIPEE 915
RA E+FY LKGG V YG+EHS+A GH+ G Y+ G + W ED+P+H +GHS G Q R+LQ +L F G TS WV S+T + NG+ Y G + ++ L + + + D P LK +++ HF +SWR+ G+R GL D +LG S +S D D+++Q A +LN + T P+T+YFS + RT+++ + LG L++ + ++ W+ S G + W G+DG L +HPR+P E
Sbjct: 117 RARELFYYLKGGQVDYGEEHSKACGHSQFGRVYEQGNYPEWDEDHPIHFVGHSAGAQVVRLLQQMLTDKAFK--GYENTSEKWVLSITALSGAFNGTTRTYLDGIQPEDGRTMKPICLLQLCRIGVIIYDWFDVPWLKAYYNFGFDHFNMSWRKIGFR-GLVD---GLLGNSGPFSSGDWILPDLSIQGAMQLNCHLNTFPNTYYFSYA---------------TKRTRKILGITVPSSILG------IHPLLFIRVLQMSQWRHPPDVS--PPYKGYRDEDWQ--GNDGALNTAYMTHPRLPIE 390 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17226.5111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17226.5111.1 >prot_Ecto-sp13_S_contig17226.5111.1 ID=prot_Ecto-sp13_S_contig17226.5111.1|Name=mRNA_Ecto-sp13_S_contig17226.5111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp RACEIFYELKGGTVCYGQEHSRAHGHACHGETYDVGLFSAWGEDNPVHVIback to top mRNA from alignment at Ecto-sp13_S_contig17226:403..3614- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17226.5111.1 ID=mRNA_Ecto-sp13_S_contig17226.5111.1|Name=mRNA_Ecto-sp13_S_contig17226.5111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17226:403..3614- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17226:403..3614- >mRNA_Ecto-sp13_S_contig17226.5111.1 ID=mRNA_Ecto-sp13_S_contig17226.5111.1|Name=mRNA_Ecto-sp13_S_contig17226.5111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=936bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17226:403..3614- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |