prot_Ecto-sp13_S_contig1722.5110.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1722.5110.1
Unique Nameprot_Ecto-sp13_S_contig1722.5110.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1063
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1722.5110.1 vs. uniprot
Match: A0A6H5KZH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH1_9PHAE)

HSP 1 Score: 764 bits (1973), Expect = 1.160e-264
Identity = 503/588 (85.54%), Postives = 513/588 (87.24%), Query Frame = 0 
Query:   95 MSLRELLGLNDAEPRPQQTCAPPATGLNLQRSLVPAVAAATGPARSRSSSSSRESGDTARRLNTGESWREEEQRRIQRMDPVGRGGGGXXXXAGQVPDGCGVATSAFARPQQQPPASGAEAHGQQGGVVWRGGGVDWVTGASSRDQLNREFLLQXXXXXXXXXXLEARHRWEQHHRQIKESQEKQGQQFLSEVARKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXXXXXXXXRESASGVGRVSHNPSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---DXXXEGEAGNKQELVALKAGHGVAVDHLNMLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISKKDTTSKIPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSPERPGRVGKQAAGRASDEDQLVPLCTIAARPTFVRTRKRPAKGIARPRDPPSPRSAKAAAEIAEAEARV 679
            MSLRELLGLNDAEPRPQQ CAPPATGLNLQRSLVPA  AA+GPARSRSSSSSRESGDTARRLNTGESWREEE RRIQRMDP GRGGGG    +GQVPDGCGVATSAFA  QQQPPASG+EAHGQQGGVVWRGGGVDW TGAS+RDQLNREFLLQXXXXXXXXXX                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXRESASGVGR+SHNPSPSP   XXXXXXXXXXXXXXXXXX                    D   EG+AGNKQELVALKAGHGVAVDHLNMLV LVEEMTHKWERQLDDGGEGGWDD MLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISK+DTTSKIPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSP+RPGRVGKQAAGRASDEDQLVPLCTIAARPTFVRTRKRPAKGIARPRDPPSPRSAKAAAEIAEAEA++
Sbjct:    1 MSLRELLGLNDAEPRPQQICAPPATGLNLQRSLVPAGGAASGPARSRSSSSSRESGDTARRLNTGESWREEEHRRIQRMDPGGRGGGG----SGQVPDGCGVATSAFAHRQQQPPASGSEAHGQQGGVVWRGGGVDWATGASNRDQLNREFLLQXXXXXXXXXXXXXXX-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRESASGVGRISHNPSPSPPPLXXXXXXXXXXXXXXXXXXQENKTLKKEQHQRRKEGAAADKTHEGQAGNKQELVALKAGHGVAVDHLNMLVSLVEEMTHKWERQLDDGGEGGWDDGMLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISKEDTTSKIPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSPDRPGRVGKQAAGRASDEDQLVPLCTIAARPTFVRTRKRPAKGIARPRDPPSPRSAKAAAEIAEAEAQM 565
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BLAST of mRNA_Ecto-sp13_S_contig1722.5110.1 vs. uniprot
Match: D7FLC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC1_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.170e-13
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:  429 MLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGT 463
            MLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGT
Sbjct:    1 MLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGT 35
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1722.5110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZH1_9PHAE1.160e-26485.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLC1_ECTSI1.170e-13100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 284..331
NoneNo IPR availableCOILSCoilCoilcoord: 238..258
NoneNo IPR availablePANTHERPTHR33416FAMILY NOT NAMEDcoord: 254..916
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..1062
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..32
score: 6.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1722contigEcto-sp13_S_contig1722:5935..11418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1722.5110.1mRNA_Ecto-sp13_S_contig1722.5110.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1722 5817..12848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1722.5110.1 ID=prot_Ecto-sp13_S_contig1722.5110.1|Name=mRNA_Ecto-sp13_S_contig1722.5110.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1063bp
MLFSRSRSREPRWQARSAVAGLALLVPLLSSCRRAHLYENSDKVRTAFQP
SALGPRPPHSSYNREVPPHDRNRPELAVWDSTTSAPHSGFQPSVMSLREL
LGLNDAEPRPQQTCAPPATGLNLQRSLVPAVAAATGPARSRSSSSSRESG
DTARRLNTGESWREEEQRRIQRMDPVGRGGGGAGGGAGQVPDGCGVATSA
FARPQQQPPASGAEAHGQQGGVVWRGGGVDWVTGASSRDQLNREFLLQQQ
QQQQHQQQLEARHRWEQHHRQIKESQEKQGQQFLSEVARKYQQQQQQQHQ
QQQQQHQQQQQQQQQQQQQQQQHQHQQQQQQHHHQKQLQQHHQRESASGV
GRVSHNPSPSPPPLQQHQQHQKQQQRMRQQEKKSLKKEQHQRRKEGAAAD
KKKEGEAGNKQELVALKAGHGVAVDHLNMLVGLVEEMTHKWERQLDDGGE
GGWDDDMLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVA
WSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEAL
SVNPLFISKKDTTSKIPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPML
MSGSIDLRHSPERPGRVGKQAAGRASDEDQLVPLCTIAARPTFVRTRKRP
AKGIARPRDPPSPRSAKAAAEIAEAEARVYEERQGMQLLLQQSAADSSTT
GKQNPKVNRASGNAHAAGSPPLAQAGGVGGVAEGPRLQQKKQRTNTTSVE
RAASEAAKRAEVWAAASDAAAAAAAAAAAAKGSTAASASTTARWSSHRPP
TGGPARGLASVPQQVEWQSQGDVCAADSQGRQHGRPVVSEGSSPPVPPTA
NLHALHVAANAVSDGAVGRPPPSSQDPAVEQRRHFASSSSFSRQHQHQHS
SSSSSSSSSSSVSSTDIRSPPSQRALRPRTGLQRSPTHTWVVRRQHTGAR
WKPRLTATALLPPHQTPREAFARPPGLSVQESVMFAAAGWVPAGEAATAS
EAAVPVSGRQQWEARRRGAERKNTARPGGGQFQTAHHHSVRTCPWHRPRG
SRPGRRRPLFPG*
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