prot_Ecto-sp13_S_contig17212.5107.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17212.5107.1
Unique Nameprot_Ecto-sp13_S_contig17212.5107.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: D8LTY7_ECTSI (Malate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY7_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 2.750e-77
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0
Query:   24 QHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLNASGG-GGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVKISHGRL 146
            QHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLL+ASGG GGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIV ISHGRL
Sbjct:  411 QHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLSASGGDGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVNISHGRL 534          
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: A0A485LAT4_9STRA (Malate synthase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAT4_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.330e-32
Identity = 66/115 (57.39%), Postives = 80/115 (69.57%), Query Frame = 0
Query:   26 GLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLNASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVK 140
            GLEEN++V + YVE+WLRGNGCIP++ KMEDAATAEISR QVWQW+ H  STS+G  IT  LV DI    T K L A   G  K+ LA  +TA+++T P   +FLT   YPHIV 
Sbjct:  415 GLEENIDVTLVYVEAWLRGNGCIPLHNKMEDAATAEISRVQVWQWLKHSVSTSNGQRITKDLVLDILNTCTDKHL-AQVKGANKYALAKDVTADILTGPTFAEFLTLPCYPHIVS 528          
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: A0A024TKX8_9STRA (Malate synthase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TKX8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 5.010e-32
Identity = 64/115 (55.65%), Postives = 83/115 (72.17%), Query Frame = 0
Query:   26 GLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLNASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVK 140
            GL+EN++V + YVE+WLRGNGCIP++ KMEDAATAEISR QVWQW+ H AST++G  IT  LV +I +  T+K L A   G  K+ LA  +TA+++T P   +FLT   YPHIV 
Sbjct:  417 GLQENIDVTLVYVEAWLRGNGCIPLHNKMEDAATAEISRVQVWQWLKHAASTANGQRITKDLVLNILDDCTNKHL-ARAKGDHKYALAKDVTADILTGPTFPEFLTLPCYPHIVS 530          
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: A0A1V9ZCF1_9STRA (Malate synthase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCF1_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.320e-32
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = 0
Query:   26 GLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLNASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVKIS 142
            GLEEN++V + Y E+WLRGNGCIP++ KMEDAATAEISR QVWQW+ HG ST D ++IT   +  I E  T + ++A+G    K+ LA ++  N +T    DDFLT   YPH+V ++
Sbjct:  394 GLEENIDVSLVYTEAWLRGNGCIPLHNKMEDAATAEISRVQVWQWLRHGRSTEDKVKITKERILQILENCTKQRISAAGTTH-KYELAQQVMINALTGDVFDDFLTLPCYPHVVSLA 509          
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: A0A1V9ZVL8_9STRA (Malate synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVL8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 8.990e-32
Identity = 63/116 (54.31%), Postives = 80/116 (68.97%), Query Frame = 0
Query:   26 GLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLNASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVKI 141
            GLEEN++V + Y E+WLRGNGCIP++ KMEDAATAEISR QVWQW+ H  STSDG  IT +LV DI    T K   A+ G   K++LA  +  N++T  + + FLT   YPHIV +
Sbjct:  411 GLEENIDVSLVYTEAWLRGNGCIPLHNKMEDAATAEISRVQVWQWLRHNRSTSDGKVITKQLVLDILASCTQKRAAATKGAN-KYQLAHDILVNVLTGDKFEAFLTLPCYPHIVTL 525          
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: A0A8K1C2B5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2B5_PYTOL)

HSP 1 Score: 127 bits (320), Expect = 9.360e-32
Identity = 61/116 (52.59%), Postives = 82/116 (70.69%), Query Frame = 0
Query:   26 GLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLNASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVKI 141
            GLEEN++V + Y E+WLRG+GCIP++ KMEDAATAEISRAQVWQWV HG+ T +G  +T  LV  I +    K  + +  GG K+ LAGR+   ++T  ++ DFLT   YPHIV++
Sbjct:  418 GLEENIDVSLVYSEAWLRGSGCIPLHNKMEDAATAEISRAQVWQWVRHGSKTVEGKVVTKSLVLSILDECV-KRRSVNAKGGNKWALAGRIVGKILTDDDMVDFLTLPCYPHIVQV 532          
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: A0A225X4Z8_9STRA (Malate synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X4Z8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.460e-31
Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 0
Query:   26 GLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKL-LNASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVKI 141
            GL EN++V + Y E+WLRG+GCIP++ KMEDAATAEISRAQVWQW+ H   T +G  +T  LV DI +   +K  LNA+ G   K+ L G +   ++T  ++ DFLT   YP IV++
Sbjct:   40 GLVENIDVSLVYTEAWLRGSGCIPLHNKMEDAATAEISRAQVWQWIRHSCKTVEGKTVTKELVLDILKECVNKRSLNAATGN--KWALGGEVMGKVLTGDDMVDFLTLPCYPRIVQL 154          
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: A0A485KK51_9STRA (Malate synthase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK51_9STRA)

HSP 1 Score: 125 bits (314), Expect = 6.300e-31
Identity = 60/116 (51.72%), Postives = 78/116 (67.24%), Query Frame = 0
Query:   26 GLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLNASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVKI 141
            GLEEN++V + Y E+WLRG GCIP++ KMEDAATAEISR+QVWQW HH   T+DG  IT  L+  I + AT K   A+   G KF+LA  + A  +T    +DFLT   YPH++ +
Sbjct:  416 GLEENIDVALVYTEAWLRGIGCIPLHNKMEDAATAEISRSQVWQWRHHNCVTADGKSITKELILAILDTATEKRA-AAAASGHKFQLAKEVIAQSLTGVHFEDFLTLPCYPHVISL 530          
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: A0A5D6XJD5_9STRA (Malate synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJD5_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.250e-30
Identity = 60/118 (50.85%), Postives = 83/118 (70.34%), Query Frame = 0
Query:   24 QHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDI-AERATHKLLNASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVK 140
            + GLEEN++V + Y E+WLRG+GCIP++ KMEDAATAEISRAQVWQW+ HG +T DG  +T  LV++I A+    + +NA  G   K+ L G +   ++T  ++ DFLT   YPHIV+
Sbjct:  416 RRGLEENIDVSLVYTEAWLRGSGCIPLHNKMEDAATAEISRAQVWQWIRHGCTTVDGTRVTKALVREILAKCVATRSVNARAGN--KWALGGAVVGKILTDDDMVDFLTLPCYPHIVQ 531          
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Match: A0A067CE19_SAPPC (Malate synthase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CE19_SAPPC)

HSP 1 Score: 124 bits (311), Expect = 1.700e-30
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = 0
Query:   26 GLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLLNASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVKIS 142
            GLEEN++V + Y E+WLRGNGCIP++ KMEDAATAEISR QVWQW+ HG ST+DG  IT  LV  I    T K +  +  G  K++LA  +  +++T+ + + FLT   YPHIV ++
Sbjct:  414 GLEENIDVSLEYTEAWLRGNGCIPLHNKMEDAATAEISRVQVWQWLRHGKSTTDGKRITKELVLSILAACTQKRVTQAKAGN-KYQLAHDVLVDVLTSDKFEAFLTLPCYPHIVTLA 529          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17212.5107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY7_ECTSI2.750e-7797.58Malate synthase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A485LAT4_9STRA1.330e-3257.39Malate synthase n=2 Tax=Aphanomyces TaxID=100860 R... [more]
A0A024TKX8_9STRA5.010e-3255.65Malate synthase n=5 Tax=Aphanomyces TaxID=100860 R... [more]
A0A1V9ZCF1_9STRA5.320e-3251.28Malate synthase (Fragment) n=1 Tax=Thraustotheca c... [more]
A0A1V9ZVL8_9STRA8.990e-3254.31Malate synthase n=1 Tax=Thraustotheca clavata TaxI... [more]
A0A8K1C2B5_PYTOL9.360e-3252.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225X4Z8_9STRA4.460e-3149.57Malate synthase n=1 Tax=Phytophthora megakarya Tax... [more]
A0A485KK51_9STRA6.300e-3151.72Malate synthase n=1 Tax=Aphanomyces stellatus TaxI... [more]
A0A5D6XJD5_9STRA1.250e-3050.85Malate synthase n=1 Tax=Pythium brassicum TaxID=14... [more]
A0A067CE19_SAPPC1.700e-3051.28Malate synthase n=3 Tax=Saprolegniaceae TaxID=4764... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1220.12coord: 23..139
e-value: 4.1E-38
score: 132.2
NoneNo IPR availablePANTHERPTHR42902:SF1MALATE SYNTHASE 1, GLYOXYSOMAL-RELATEDcoord: 24..142
IPR001465Malate synthasePFAMPF01274Malate_synthasecoord: 23..139
e-value: 3.4E-33
score: 114.7
IPR006252Malate synthase APANTHERPTHR42902FAMILY NOT NAMEDcoord: 24..142
IPR011076Malate synthase-like superfamilySUPERFAMILY51645Malate synthase Gcoord: 20..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17212contigEcto-sp13_S_contig17212:964..1689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17212.5107.1mRNA_Ecto-sp13_S_contig17212.5107.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17212 763..1733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17212.5107.1 ID=prot_Ecto-sp13_S_contig17212.5107.1|Name=mRNA_Ecto-sp13_S_contig17212.5107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
MCSVLSAIDRRRSCPVRLLRDHRQHGLEENVEVCIFYVESWLRGNGCIPV
NFKMEDAATAEISRAQVWQWVHHGASTSDGIEITPRLVQDIAERATHKLL
NASGGGGGKFRLAGRLTANMMTAPELDDFLTSVAYPHIVKISHGRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001465Malate_synthase
IPR006252Malate_synthA
IPR011076Malate_synth-like_sf