prot_Ecto-sp13_S_contig10541.509.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10541.509.1
Unique Nameprot_Ecto-sp13_S_contig10541.509.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length281
Homology
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: A0A6H5JI22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI22_9PHAE)

HSP 1 Score: 422 bits (1085), Expect = 3.870e-144
Identity = 218/255 (85.49%), Postives = 225/255 (88.24%), Query Frame = 0
Query:   24 VCVLAMDEHTMPFTYRSQQRSMLRXXXXXXXXXXXXXASCRCVLFAAVVLLLQLVGKGSAKSAGGAGGAHRHPTNLQRPPLLEAEAQGSLQATKEENKRRECHNTLGRLSQIASFAVPDDATKRHRLHMPRITGLRRPGCSSGGSDCHLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGGQREGEG 278
            +C+L  DE TMPF YRSQQRSMLR             ASCRCV F AVVLLLQLVGKGSAKSAG AGGAHRHPTN QRPPL EAEA GSL+ATKEE KR+ECH+TLGRLSQ ASFAVPDDAT +HRLHMPRITGLRRP C SGG DCHLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKG+RDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGG REGEG
Sbjct:    1 MCILPTDEPTMPFMYRSQQRSMLRRREGRRHESNSSNASCRCVFFVAVVLLLQLVGKGSAKSAGEAGGAHRHPTNPQRPPLPEAEAYGSLEATKEERKRKECHSTLGRLSQTASFAVPDDATTQHRLHMPRITGLRRPDCLSGGLDCHLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGSRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGGPREGEG 255          
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: D7G8X0_ECTSI (Mitochondrial carrier protein-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X0_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 2.060e-75
Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0
Query:  152 MPRITGLRRPGCSSGGSDCHLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGGQREGEG 278
            MPRITGLRR  C SGGSDCHLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGG REGEG
Sbjct:    1 MPRITGLRRSDCLSGGSDCHLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGGPREGEG 127          
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: A0A836CFD2_9STRA (Mitochondrial carrier protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFD2_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.920e-28
Identity = 60/92 (65.22%), Postives = 72/92 (78.26%), Query Frame = 0
Query:  178 MAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAG 269
            MA+AGAMAGAI+T  L PIDTAKTLRQ+NP+AFKGT  AL+H+ +T GP +IY G+  AVVG+MPSSALYFG YE+VK RL R A   +  G
Sbjct:    1 MALAGAMAGAISTVTLHPIDTAKTLRQSNPQAFKGTIQALSHMLKTHGPGSIYAGVGAAVVGSMPSSALYFGAYESVKARLTRAAGRRWGGG 92          
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: A0A7S2STS4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STS4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 7.060e-18
Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 0
Query:  176 VKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAAN 264
            ++ A+AGA+AG +    L P+DT KTLRQ +P+ +K T  AL+   RTRG  A+Y G+  A +GAMPSSALYFG Y+ VK RL R  AN
Sbjct:   30 LRSALAGAIAGGVTNTILHPLDTCKTLRQRHPQQYKSTLAALSSTLRTRGIGALYRGVIPAAIGAMPSSALYFGFYDIVKRRLTRFVAN 118          
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: A0A7S2DQE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQE7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 7.570e-17
Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 0
Query:  175 DVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVA 262
            D++ A+AG +AG+  T  L P+DTAK LRQ NP  + GT  AL    R RG   +Y+G+  + +G++PSSALYFGTYE VK RL  +A
Sbjct:   23 DIRSALAGGLAGSFTTGILHPLDTAKVLRQKNPTQYAGTLQALVVTARERGIRPLYSGLWASALGSLPSSALYFGTYECVKRRLYALA 110          
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: A0A2V3J0Y3_9FLOR (Protein MITOFERRINLIKE 1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Y3_9FLOR)

HSP 1 Score: 87.4 bits (215), Expect = 2.890e-16
Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0
Query:  177 KMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNF 266
            ++A AG MAG +    L P+DT KT+RQA+P  F+G    L  I RTRGP+A+Y GI  A++G+  SSALYFG YE VK  L +++  +F
Sbjct:   21 RLAAAGGMAGMLTNTLLHPLDTVKTVRQADPTHFRGMAPTLLKIIRTRGPFALYAGIVPALIGSAFSSALYFGAYEMVKGALAQMSPYSF 110          
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: A0A7R9WVA4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVA4_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.910e-16
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 0
Query:  177 KMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAI---YTGIPTAVVGAMPSSALYFGTYEAVKTRLMRV 261
            ++A+AG +AGA  T+AL+PID+AKTLRQ+NP  +   R A   + ++   W I   Y GI  A VGA+PSSALYFG YE+VKT L R 
Sbjct:  160 RVALAGGLAGATGTSALYPIDSAKTLRQSNPSMYSSVRHAFLSLIKSGNRWHISKAYKGIIPAAVGAIPSSALYFGAYESVKTALQRA 247          
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: A0A7S3LH63_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LH63_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.100e-15
Identity = 54/127 (42.52%), Postives = 72/127 (56.69%), Query Frame = 0
Query:  133 SQIASFAVPDDATKRHRLHMPRITGLRRP-GCSSGGSDCHLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAI---YTGIPTAVVGAMPSSALYFGTYEAVK 255
            +QI   A   DA   HR  +    G ++  G    GS  + +R   + +AG +AGA  T ALFP+D+AKTLRQ++P  +K  R AL  +    G W I   Y G+  A +GA+PSSALYFG YE VK
Sbjct:  113 NQIKDTAFHTDAAHCHRQFLRTTFGRKKNRGRPQQGSFSYAIR---VGLAGGIAGAAGTLALFPVDSAKTLRQSSPSLYKNVRQALGKLVVEDGKWHIGRAYCGVIPATLGAIPSSALYFGAYECVK 236          
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: A0A7S3LFM8_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFM8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.710e-15
Identity = 54/127 (42.52%), Postives = 72/127 (56.69%), Query Frame = 0
Query:  133 SQIASFAVPDDATKRHRLHMPRITGLRRP-GCSSGGSDCHLVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAI---YTGIPTAVVGAMPSSALYFGTYEAVK 255
            +QI   A   DA   HR  +    G ++  G    GS  + +R   + +AG +AGA  T ALFP+D+AKTLRQ++P  +K  R AL  +    G W I   Y G+  A +GA+PSSALYFG YE VK
Sbjct:  113 NQIKDTAFHTDAAHCHRQFLRTTFGRKKNRGRPQQGSFSYAIR---VGLAGGIAGAAGTLALFPVDSAKTLRQSSPSLYKNVRQALGKLVVEDGKWHIGRAYCGVIPATLGAIPSSALYFGAYECVK 236          
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Match: A0A448Z9E8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9E8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.740e-14
Identity = 43/87 (49.43%), Postives = 62/87 (71.26%), Query Frame = 0
Query:  176 VKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWA-IYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRV 261
            +++A+AG +AGA  +A L+PID+AKTLRQ+NP A+   RDAL  + +++     +Y GI  A +GA+PSSALYFG YE+ K  L R+
Sbjct:  116 LRIALAGGLAGATGSAVLYPIDSAKTLRQSNPTAYSSVRDALWTMLKSKNALRRVYRGILPAALGAIPSSALYFGAYESSKVTLKRL 202          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10541.509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JI22_9PHAE3.870e-14485.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8X0_ECTSI2.060e-7596.85Mitochondrial carrier protein-like n=1 Tax=Ectocar... [more]
A0A836CFD2_9STRA2.920e-2865.22Mitochondrial carrier protein-like protein n=1 Tax... [more]
A0A7S2STS4_9STRA7.060e-1852.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2DQE7_9STRA7.570e-1750.00Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A2V3J0Y3_9FLOR2.890e-1648.89Protein MITOFERRINLIKE 1, chloroplastic n=1 Tax=Gr... [more]
A0A7R9WVA4_9STRA5.910e-1652.27Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S3LH63_9STRA1.100e-1542.52Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3LFM8_9STRA2.710e-1542.52Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A448Z9E8_9STRA2.740e-1449.43Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 164..270
e-value: 1.7E-19
score: 71.5
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 175..265
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 178..260
e-value: 9.9E-17
score: 60.7
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 173..257
score: 20.432
NoneNo IPR availablePANTHERPTHR45667:SF11MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEINcoord: 170..266
NoneNo IPR availablePANTHERPTHR45667FAMILY NOT NAMEDcoord: 170..266
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..281
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 227..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10541contigEcto-sp13_S_contig10541:1404..4686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10541.509.1mRNA_Ecto-sp13_S_contig10541.509.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10541 1404..4686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10541.509.1 ID=prot_Ecto-sp13_S_contig10541.509.1|Name=mRNA_Ecto-sp13_S_contig10541.509.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=281bp
GYRRLSPLPECGQIIVVLCASFSVCVLAMDEHTMPFTYRSQQRSMLRRRE
GRRRGNNSSNASCRCVLFAAVVLLLQLVGKGSAKSAGGAGGAHRHPTNLQ
RPPLLEAEAQGSLQATKEENKRRECHNTLGRLSQIASFAVPDDATKRHRL
HMPRITGLRRPGCSSGGSDCHLVRDVKMAVAGAMAGAIATAALFPIDTAK
TLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGT
YEAVKTRLMRVAANNFPAGPGGQREGEGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf
IPR018108Mitochondrial_sb/sol_carrier