prot_Ecto-sp13_S_contig17175.5083.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17175.5083.1
Unique Nameprot_Ecto-sp13_S_contig17175.5083.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length117
Homology
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: D7FJG1_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG1_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 5.230e-74
Identity = 108/112 (96.43%), Postives = 109/112 (97.32%), Query Frame = 0
Query:    4 LRVLTVTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRDVCCPLCHLDISKALTGSSGVAFVSVIEGNPRPVIERTRR 115
            L V  VTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNR+VCCPLCHLDISKALTGSSGVAFVSVIEGNPRPVIERTRR
Sbjct:   87 LPVTVVTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRNVCCPLCHLDISKALTGSSGVAFVSVIEGNPRPVIERTRR 198          
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: A0A7S2Y0A3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.290e-19
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    8 TVTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRDVCCPLCHLDISKALTGSSG 95
            TVT     K    A +A GE        DDD ++CR+CLS+YQ G+ +R+LPCFH+FH   ID+WL R VCCPLC+  + KAL    G
Sbjct:  114 TVTHRGDCKAAATAQEAFGE--------DDDKVSCRVCLSEYQDGECLRVLPCFHKFHKGCIDEWLERSVCCPLCNTSVDKALQQHGG 193          
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: A0A835ZD21_9STRA (FAD dependent oxidoreductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD21_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.700e-14
Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 0
Query:   14 CAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWL-NRDVCCPLCHLDISKALTGSSGV 96
            C  +     +  G      E +D+D ++CR+CL +Y+ GD++RILPC HR+HV  +D+WL  R   CPLC+  ++  L G  G+
Sbjct:  242 CGARSGSLGECGGGGQGAREEVDEDKISCRVCLCEYEAGDELRILPCLHRYHVHCVDEWLVKRSPACPLCNTSVAVVLHGHPGL 325          
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: A0A6H5KTI9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI9_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.210e-13
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 0
Query:   32 AEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRDVCCPLCHLDISKA 89
            AE  ++D ++CR+CLSDY+ GD +RILPC H+FH   ID+WL R V CPLC+  +  A
Sbjct:  916 AEHGEEDKVSCRVCLSDYEAGDTLRILPCLHKFHRVCIDEWLGRSVLCPLCNTSVEVA 973          
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: A0A4D9D6F5_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6F5_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.310e-13
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   30 PKAEPID--DDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRDVCCPLC 82
            P  + +D  DD ++CRICL DY  GD++R+LPCFHRFH     DWL R   CPLC
Sbjct:  116 PPLKKVDSHDDDVSCRICLEDYAEGDRLRVLPCFHRFHAECSSDWLKRKKTCPLC 170          
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: A0A5B8N0M7_9CHLO (RING-type domain-containing protein n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8N0M7_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 2.380e-12
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 0
Query:   27 EQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNR-DVCCPLCHLDISKALTGSSGVAF 98
            E +  ++ +D  + TC IC+ +Y+ GD++R LPC HRFH+S ID+WL + +  CPLC  DI K +  SS  A 
Sbjct:  288 EDSACSDALDSSTETCAICIEEYEDGDRLRELPCGHRFHISCIDEWLTKVNSVCPLCKFDIGKHVKNSSADAI 360          
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: W7U3U3_9STRA (Ring u-box domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3U3_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.540e-12
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   30 PKAEPID--DDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRDVCCPLC 82
            P  + +D  DD ++CRICL DY  GD++R+LPCFHRFH     DWL R   CPLC
Sbjct:  268 PPLKKVDSHDDDVSCRICLEDYAEGDRLRVLPCFHRFHAECSSDWLKRRKTCPLC 322          
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: A0A0D7BJU2_9AGAR (RING-type domain-containing protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BJU2_9AGAR)

HSP 1 Score: 70.9 bits (172), Expect = 5.810e-12
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   34 PIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWL-NRDVCCPLCHLDISKALTGSSGVAFVSVIEGNPRPVIERT 113
            P  +D + C ICLS++  GDKVR+LPC H FH++E+D+WL  R   CP+C  D++    GS+ V  +        P++ RT
Sbjct:  314 PWFEDQLECAICLSEFAKGDKVRVLPCHHIFHLAEVDEWLIQRKKLCPICKADVTHP--GSTAVPTLQENATEETPLLSRT 392          
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: A0A8H5G9Z8_9AGAR (RING-type domain-containing protein n=1 Tax=Leucoagaricus leucothites TaxID=201217 RepID=A0A8H5G9Z8_9AGAR)

HSP 1 Score: 70.9 bits (172), Expect = 6.150e-12
Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   10 TEEMCAKKKHQAVD--ANGEQAPKAEPIDDD-----SMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWL-NRDVCCPLCHLDISK 88
            TEE  + K   A +  AN   +P AE  +D       + C ICLS++  GDKVR+LPC H FH+SEID+WL +R   CP+C  D+++
Sbjct:  306 TEETQSAKALDATEDPANSSTSPLAEDPNDQPWFESQLECAICLSEFTKGDKVRVLPCQHIFHLSEIDEWLIHRKKLCPVCKADVTQ 392          
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Match: A0A6J5U009_PRUAR (RING-type domain-containing protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5U009_PRUAR)

HSP 1 Score: 66.2 bits (160), Expect = 1.020e-11
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:   38 DSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLN-RDVCCPLCHLDISKALTGSS 94
            D+  C ICLS+Y  GDK+R+LPC H FH+  +D WL  +   CPLC  D+ K +  SS
Sbjct:   53 DAQECYICLSEYNEGDKIRVLPCCHEFHMECVDRWLKEKQSVCPLCRGDVCKGIAESS 110          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17175.5083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJG1_ECTSI5.230e-7496.43RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2Y0A3_9STRA2.290e-1947.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZD21_9STRA4.700e-1438.10FAD dependent oxidoreductase-domain-containing pro... [more]
A0A6H5KTI9_9PHAE1.210e-1353.45RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A4D9D6F5_9STRA3.310e-1354.55RING-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A5B8N0M7_9CHLO2.380e-1243.84RING-type domain-containing protein n=3 Tax=Chloro... [more]
W7U3U3_9STRA2.540e-1254.55Ring u-box domain-containing protein n=1 Tax=Nanno... [more]
A0A0D7BJU2_9AGAR5.810e-1240.74RING-type domain-containing protein n=1 Tax=Cylind... [more]
A0A8H5G9Z8_9AGAR6.150e-1243.68RING-type domain-containing protein n=1 Tax=Leucoa... [more]
A0A6J5U009_PRUAR1.020e-1148.28RING-type domain-containing protein n=1 Tax=Prunus... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 12..91
e-value: 8.7E-16
score: 58.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 41..82
e-value: 2.6E-9
score: 37.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 42..83
score: 9.967
NoneNo IPR availablePANTHERPTHR45977:SF4TARGET OF ERK KINASE MPK-1coord: 20..88
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 20..88
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 35..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17175contigEcto-sp13_S_contig17175:2484..3701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17175.5083.1mRNA_Ecto-sp13_S_contig17175.5083.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17175 227..3710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17175.5083.1 ID=prot_Ecto-sp13_S_contig17175.5083.1|Name=mRNA_Ecto-sp13_S_contig17175.5083.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=117bp
MLLLRVLTVTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQ
PGDKVRILPCFHRFHVSEIDDWLNRDVCCPLCHLDISKALTGSSGVAFVS
VIEGNPRPVIERTRRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING