prot_Ecto-sp13_S_contig1715.5072.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1715.5072.1
Unique Nameprot_Ecto-sp13_S_contig1715.5072.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length254
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1715.5072.1 vs. uniprot
Match: D8LN06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN06_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 1.460e-93
Identity = 224/253 (88.54%), Postives = 233/253 (92.09%), Query Frame = 0 
Query:    1 MRLAALAVLEESSEDNQEPANNANGVVGANESGEETESDGPEATAARRGDDAXXXXXXXGTEEEEEEDICLVCCEVRDPDRILRCSSCSGGGSGMGIYHNECLPKPLDSMPAGGEWVCPRCVTKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPRRAWSASMEALLATAVEKIGAGKWKEMEEDPDFDFEGMPANALKQKWRTLSQKRRN 253
            MRLAALAVLEESSEDN+EPANNANGVV ANESGEETESDGPEATA       XXXXXXX TEEEEEEDICLVCCEVRDPDRILRCS+CSGGGSGMGIYHNECLPKPL+SMPA GEWVCPRCVTKKR        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PRRAWS+SMEALLATAV+K+GAGKWKEMEEDP+FDFEGMPANAL+QKWRTLSQKRR+
Sbjct:    1 MRLAALAVLEESSEDNEEPANNANGVVDANESGEETESDGPEATAXXXXXXXXXXXXXXXTEEEEEEDICLVCCEVRDPDRILRCSNCSGGGSGMGIYHNECLPKPLESMPAEGEWVCPRCVTKKRKHGGPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PRRAWSSSMEALLATAVKKMGAGKWKEMEEDPEFDFEGMPANALRQKWRTLSQKRRS 252
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BLAST of mRNA_Ecto-sp13_S_contig1715.5072.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 4.770e-66
Identity = 210/261 (80.46%), Postives = 213/261 (81.61%), Query Frame = 0 
Query:    1 MRLAALAVLEESSEDNQEPANNANGVVGANESGEETESDGPEATAARRGDDAXXXXXXXGTEEEEEEDICLVCCEVRDPDRILRCSSCSGGGSGMGIYHNECLPKPLDSMPAGGEWVCPRCVTKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------KKPRRAWSASMEALLATAVEKIGAGKWKEMEEDPDFDFEGMPANALKQKWRTLSQKRRN 253
            MRLAAL             ANNANGVVGAN                      XXXXXXX TEEEEEEDICLVCCEVRDPDRILRCSSCSGGGSGMGIYHNECLPKPLDSMPA GEWVCPRCVTKKR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        KKPRRAWSASMEALLATAV+K+GAGKWKEMEEDP+FDFEGMPANALKQKWRTLSQKRRN
Sbjct: 1267 MRLAALXXXXXXXXXXXXLANNANGVVGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEEEEEEDICLVCCEVRDPDRILRCSSCSGGGSGMGIYHNECLPKPLDSMPAEGEWVCPRCVTKKRKHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPRRAWSASMEALLATAVKKVGAGKWKEMEEDPEFDFEGMPANALKQKWRTLSQKRRN 1527
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1715.5072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN06_ECTSI1.460e-9388.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWU5_9PHAE4.770e-6680.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 193..252
e-value: 2.3E-8
score: 35.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 53..145
e-value: 4.4E-15
score: 57.0
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 67..124
score: 8.6
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 193..248
score: 6.005
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 196..247
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 62..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1715contigEcto-sp13_S_contig1715:9415..12370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1715.5072.1mRNA_Ecto-sp13_S_contig1715.5072.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1715 9415..12370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1715.5072.1 ID=prot_Ecto-sp13_S_contig1715.5072.1|Name=mRNA_Ecto-sp13_S_contig1715.5072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
MRLAALAVLEESSEDNQEPANNANGVVGANESGEETESDGPEATAARRGD
DAGSDAEADGTEEEEEEDICLVCCEVRDPDRILRCSSCSGGGSGMGIYHN
ECLPKPLDSMPAGGEWVCPRCVTKKRKQGGSGAGGSKSTAGKNKGGGKDG
GSTKAAAAAAASKKRKVPSREDAGGGGGGGGGGADGGREEGGGTKKPRRA
WSASMEALLATAVEKIGAGKWKEMEEDPDFDFEGMPANALKQKWRTLSQK
RRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf
IPR011011Znf_FYVE_PHD