prot_Ecto-sp13_S_contig17112.5052.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17112.5052.1
Unique Nameprot_Ecto-sp13_S_contig17112.5052.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length163
Homology
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: A0A6H5KWT8_9PHAE (Ribosomal_S7 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWT8_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 1.090e-102
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            +FDDIEIRDISLEDYIAVKGKYAT+LPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII
Sbjct:   53 SFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 207          
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: B8CC69_THAPS (RS5, ribosomal protein 5 n=10 Tax=Ochrophyta TaxID=2696291 RepID=B8CC69_THAPS)

HSP 1 Score: 270 bits (691), Expect = 4.030e-90
Identity = 131/155 (84.52%), Postives = 146/155 (94.19%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            +FDDIEIRDISL DYIA KG +AT+LPHTAGRYQKKRFRKA+CPIVERL C LMRKGRNSGKKLMA RIV+HTLEIIHLLTDQNPVQV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYL+ TGARE+SFRN+KT+AECLA+E++
Sbjct:   38 SFDDIEIRDISLVDYIACKGDHATYLPHTAGRYQKKRFRKASCPIVERLACCLMRKGRNSGKKLMAVRIVQHTLEIIHLLTDQNPVQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTVAECLAEELV 192          
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: A0A6V2ER46_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ER46_9STRA)

HSP 1 Score: 266 bits (681), Expect = 2.220e-88
Identity = 128/155 (82.58%), Postives = 146/155 (94.19%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            +FD+IE+RDISL DYIA KG +AT+LPHTAGRYQKKRFRKA+CPIVERL C LMRKGRN+GKKLMA RIV+HTLEIIHLLTDQNP+QV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYL+ TGARE+SFRN+KT+AECLA+E+I
Sbjct:   53 SFDEIEVRDISLVDYIACKGDHATYLPHTAGRYQKKRFRKASCPIVERLACCLMRKGRNAGKKLMAVRIVQHTLEIIHLLTDQNPIQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTMAECLAEELI 207          
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: A0A7S3V821_9STRA (Hypothetical protein n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3V821_9STRA)

HSP 1 Score: 266 bits (680), Expect = 2.250e-88
Identity = 127/155 (81.94%), Postives = 146/155 (94.19%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            +FD+IE+RDISLEDYIA KG +AT+LPHTAGRYQ KRFRKA+CPIVERL C LM+KGRNSGKK+MA RIV+HTLEIIH+LTDQNP+Q++VDAVINSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYLI TGARE+SFRN+KT+AECLA+E+I
Sbjct:   43 SFDEIEVRDISLEDYIACKGDHATYLPHTAGRYQMKRFRKASCPIVERLACCLMKKGRNSGKKIMATRIVQHTLEIIHILTDQNPIQIVVDAVINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLIATGAREASFRNLKTMAECLAEELI 197          
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: A0A7S4N0H9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N0H9_9STRA)

HSP 1 Score: 265 bits (678), Expect = 5.930e-88
Identity = 128/155 (82.58%), Postives = 144/155 (92.90%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            +FDD+E+RDISL DYIA  G +A FLPHTAGRYQKKRFRKA+CPIVERL C LM+KGRNSGKKLMA RIV+HTLEIIHLLTDQNP+QV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYLI TGARE+SFRN+KT+AECLA+E+I
Sbjct:   51 SFDDVEVRDISLVDYIACTGDHAVFLPHTAGRYQKKRFRKASCPIVERLACCLMKKGRNSGKKLMACRIVQHTLEIIHLLTDQNPIQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLIATGAREASFRNLKTMAECLAEELI 205          
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: A0A835ZGP4_9STRA (Ribosomal protein S7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP4_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.350e-87
Identity = 129/155 (83.23%), Postives = 146/155 (94.19%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            ++DDIEI DISL DY+AV  K+ATFLPHTAGRYQKKRFRKA CP++ERL  +LMRKGRNSGKKL+AAR+V+ T+EIIHLLTD+NP+Q LV+AVIN+GPREDSTRVGSAGVVRRQAVDLSPFRRVNQA+YL+TTGARESSFRNIKTIAECLADEII
Sbjct:   13 SYDDIEIEDISLSDYLAVGTKHATFLPHTAGRYQKKRFRKAACPLIERLTVSLMRKGRNSGKKLLAARVVRSTMEIIHLLTDENPLQTLVNAVINAGPREDSTRVGSAGVVRRQAVDLSPFRRVNQAIYLLTTGARESSFRNIKTIAECLADEII 167          
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: D8TJL0_VOLCA (Component of cytosolic 80S ribosome and 40S small subunit n=2 Tax=Viridiplantae TaxID=33090 RepID=D8TJL0_VOLCA)

HSP 1 Score: 263 bits (671), Expect = 1.920e-87
Identity = 125/155 (80.65%), Postives = 145/155 (93.55%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            +F+DIE++DISLEDYIAVK KYA ++PHTAGRYQKKRFRKA CPIVERLC +LM  GRN+GKKLMA RIVKH  +IIHLLTDQNP+QVLVDA+INSGPRED+TR+GSAGVVRRQAVD+SP RRVNQA+YL+TTGARE++FRNIKTIAECLADE++
Sbjct:   13 SFEDIEVQDISLEDYIAVKTKYAVYVPHTAGRYQKKRFRKALCPIVERLCNSLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVLVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELV 167          
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: F0XZC6_AURAN (Ribosomal_S7 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XZC6_AURAN)

HSP 1 Score: 263 bits (671), Expect = 2.050e-87
Identity = 126/155 (81.29%), Postives = 143/155 (92.26%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            T+DD+E+ DISLEDYIAVKGK++ +LPHTAGRYQKKRFRKA CPI ERL CALMRKGRN+GKKL A RIV+ TLEI+HLLTDQNPVQVLV A++ SGPREDSTRVGSAGVVRRQAVD+SPFRRVN ALYL+ TGARE++FRN+KTIAECLADE+I
Sbjct:   15 TYDDVEVNDISLEDYIAVKGKHSVYLPHTAGRYQKKRFRKALCPITERLVCALMRKGRNNGKKLKAVRIVQSTLEIVHLLTDQNPVQVLVQAILQSGPREDSTRVGSAGVVRRQAVDMSPFRRVNMALYLLCTGAREAAFRNVKTIAECLADEVI 169          
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: W7TXQ4_9STRA (Ribosomal protein S7, conserved site n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXQ4_9STRA)

HSP 1 Score: 263 bits (672), Expect = 2.840e-87
Identity = 131/155 (84.52%), Postives = 144/155 (92.90%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            +  D+EI+D+SLEDYI V GK AT+LPHTAGRYQKKRFRKA CP+VERL  +LMRKGRNSGKKL A RIVKHTLEIIHLLTDQNPVQV+VD++IN+GPREDSTRVGSAGVVRRQAVD+SPFRRVNQA+YLITTGARESSFRNIKTIAE LADEII
Sbjct:   35 SLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLTANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEII 189          
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Match: A0A812XN14_SYMMI (RPS5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XN14_SYMMI)

HSP 1 Score: 261 bits (667), Expect = 5.190e-87
Identity = 127/155 (81.94%), Postives = 144/155 (92.90%), Query Frame = 0
Query:    9 TFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEII 163
            + D++EI DISL D+IAVKGK+A +  HTAGRYQ+K FRKA CPIVERL C+LMR GRN+GKK+MA RIVKHT+EIIH+LTDQNPVQVLVDA+INSGPREDSTR+GSAGVVRRQAVD+SPFRRVNQA+YL+TTGARESSFRNIKTIAECLADEII
Sbjct:    1 SLDEVEISDISLVDFIAVKGKHANYTNHTAGRYQRKSFRKAQCPIVERLACSLMRHGRNTGKKIMACRIVKHTMEIIHILTDQNPVQVLVDAIINSGPREDSTRIGSAGVVRRQAVDVSPFRRVNQAIYLMTTGARESSFRNIKTIAECLADEII 155          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17112.5052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWT8_9PHAE1.090e-10298.71Ribosomal_S7 domain-containing protein n=2 Tax=Ect... [more]
B8CC69_THAPS4.030e-9084.52RS5, ribosomal protein 5 n=10 Tax=Ochrophyta TaxID... [more]
A0A6V2ER46_9STRA2.220e-8882.58Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3V821_9STRA2.250e-8881.94Hypothetical protein n=3 Tax=Bacillariophyta TaxID... [more]
A0A7S4N0H9_9STRA5.930e-8882.58Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A835ZGP4_9STRA1.350e-8783.23Ribosomal protein S7 domain-containing protein n=1... [more]
D8TJL0_VOLCA1.920e-8780.65Component of cytosolic 80S ribosome and 40S small ... [more]
F0XZC6_AURAN2.050e-8781.29Ribosomal_S7 domain-containing protein n=2 Tax=Pel... [more]
W7TXQ4_9STRA2.840e-8784.52Ribosomal protein S7, conserved site n=2 Tax=Monod... [more]
A0A812XN14_SYMMI5.190e-8781.94RPS5 protein n=1 Tax=Symbiodinium microadriaticum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMTIGR01028TIGR01028coord: 10..163
e-value: 7.7E-69
score: 229.1
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10coord: 7..163
e-value: 8.4E-76
score: 255.8
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 10..163
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 7..163
e-value: 4.8E-32
score: 109.4
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 8..163
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 47..163
e-value: 4.2E-25
score: 88.1
NoneNo IPR availablePANTHERPTHR11205:SF36coord: 8..163
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 55..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17112contigEcto-sp13_S_contig17112:2..2916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17112.5052.1mRNA_Ecto-sp13_S_contig17112.5052.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17112 2..2916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17112.5052.1 ID=prot_Ecto-sp13_S_contig17112.5052.1|Name=mRNA_Ecto-sp13_S_contig17112.5052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
MRVFCFVRTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKAT
CPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDA
VINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRN
IKTIAECLADEII
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005716Ribosomal_S5/S7_euk/arc
IPR036823Ribosomal_S7_dom_sf
IPR000235Ribosomal_S5/S7
IPR023798Ribosomal_S7_dom
IPR020606Ribosomal_S7_CS