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Homology
BLAST of mRNA_Ecto-sp13_S_contig171.5041.1 vs. uniprot
Match: A0A6H5L6Q0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q0_9PHAE) HSP 1 Score: 1314 bits (3400), Expect = 0.000e+0 Identity = 715/889 (80.43%), Postives = 739/889 (83.13%), Query Frame = 1
Query: 124 MSARCNLSQEGKEDDSDEGGHETWSPGKRVSRTRHFSSCILRQALPTTSPIKLRHCQQTSNCSGEADEEQDSRNDNSTHSNTSE-TTCNGTYSSDEEPASRRENIWGGEIGATIMAEKEQHHGG-------AAPVHASSPVLSLPGPPSPRSREQAGKVSGSSAVMIRDHTFSVSPQARDSAPLSLSLQPVAVFRSRNSNYTPTSQRNRHSSTAIHEPRARCGCRGLTVRVDSGPLGLSLEASYRVGETFVLKQAWSDCAADSGMFAHSMLVSNLPGKVDDDQAGVLDVRLDGRSSSSGLIKVRAVGLERDHVTMTVRTRQGSILNGVPSPPNDSRGSVVGVLELDEGDILVRVDNVQVTKKSFTEVASLLDQAKRPIRLTFVRHACGRRFVGRDHGYGGGGTCRGAARQQPPFRIANCGGWDRCCGMMGKSGCGGKQPPNASCVGRLVSSPLPKIETEADGCPVAVILRARRQLRSGGIEQWCEVVASRRRLWQRLLRNLSPDSHSDRAKLRKLVGCSRSVDEHALKGRTGLVKRTLRNNYQRLISSRKGARKGSNTNGCNKAKRALAAKVWKDVNRTMSPRRHGARPGFFSASQLGGGGHVCPAHFAGGSKHAVFRVAFATASTLQFVSGMSYMAALALVQEPVEAMAYATLATLLQDRVMQALFPLGDVDLLDAYHLCGGRVVTFRTLSAARSPTPSEAAPTGKSGDGRHPFRGQGHRRIVEGDACSKVVSAGSLRKDKATTMCDTGGADRACGWEMGELEEEPTRQVVVDEMLPRLVRIFGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNGMEILLQYGNLTANVSFQEVLRCTLATQ 2766
MSAR NLS+EGKED SDEG HETWSPGKRVSRTRH+SSCILRQALPTTSPIKLRHCQQTSNC+GE DEEQDSRNDNSTHSNTSE +TC+GTYSSDEEPASRR+NIWGG+ GATIMAE+ QHHG AAPVHASSP+LSLPGPPSPRSR+QAGKV GSSAVM RDHT SVS QARD APLS S QPVAVFRSRNSNYTPTSQ N HSSTAIHEPRARCGCRGLTVRVDSGPLGLSLEASYRVGET VLKQAWSDCAADSGMFAHSMLVSN+PGKVDDDQA VLD LDGR SSSGLIKVRAVGLERDH TMTVRTRQG+ILNG PSPP++SRG VVGVLELDEGDILVRVDNVQ PPNASCVGRLVSSP PKIETEADGCPVAVILRARRQLRSGG+EQW E VASRRRLWQRLLRNLSPDSHSDRAKLRKLV CSRS D HALKG LVK LRNNYQRLISSRKG RK SNT+GCNKAKRALAAKVWKDVNRTMSPRRHGARPGFFSASQLGGGGHVCPAHFAGGSKHAVFRVAFATASTLQFVSGMSYMAAL LVQEPVEAMAYATL TLLQ ALFPLGDVDLLDAYHLCGGRVVTFR AARSPTPSEAA G+SGDG++PF GQGH R+ EGD SKVVSAGSLRKDKATT+ DT GADRACGWE+GELEEE VVVDEMLPRLVRIFGKALKRRLPALHGHLCKEA+PMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLK LNG+EILLQYGNLTANVSFQEVLRC LATQ
Sbjct: 1 MSARYNLSEEGKEDSSDEGDHETWSPGKRVSRTRHYSSCILRQALPTTSPIKLRHCQQTSNCNGEPDEEQDSRNDNSTHSNTSEQSTCSGTYSSDEEPASRRKNIWGGDTGATIMAERGQHHGDDGDIALVAAPVHASSPLLSLPGPPSPRSRKQAGKVLGSSAVMNRDHTLSVSSQARDPAPLSPSPQPVAVFRSRNSNYTPTSQPNHHSSTAIHEPRARCGCRGLTVRVDSGPLGLSLEASYRVGETLVLKQAWSDCAADSGMFAHSMLVSNVPGKVDDDQARVLDPWLDGRLSSSGLIKVRAVGLERDHATMTVRTRQGNILNGAPSPPSESRGRVVGVLELDEGDILVRVDNVQ--------------------------------------------------------------------------------PPNASCVGRLVSSPSPKIETEADGCPVAVILRARRQLRSGGMEQWYEAVASRRRLWQRLLRNLSPDSHSDRAKLRKLVVCSRSADGHALKG---LVKCKLRNNYQRLISSRKGLRKSSNTDGCNKAKRALAAKVWKDVNRTMSPRRHGARPGFFSASQLGGGGHVCPAHFAGGSKHAVFRVAFATASTLQFVSGMSYMAALVLVQEPVEAMAYATLVTLLQ-----ALFPLGDVDLLDAYHLCGGRVVTFRAFGAARSPTPSEAAARGESGDGQYPFPGQGHLRMAEGDTRSKVVSAGSLRKDKATTIRDTDGADRACGWEIGELEEE----VVVDEMLPRLVRIFGKALKRRLPALHGHLCKEAVPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKTLNGLEILLQYGNLTANVSFQEVLRCALATQ 797
BLAST of mRNA_Ecto-sp13_S_contig171.5041.1 vs. uniprot
Match: D7FQL0_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQL0_ECTSI) HSP 1 Score: 1311 bits (3392), Expect = 0.000e+0 Identity = 704/906 (77.70%), Postives = 745/906 (82.23%), Query Frame = 1
Query: 124 MSARCNLSQEGKEDDSDEGGHETWSPGKRVSRTRHFSSCILRQALPTTSPIKLRHCQQTSNCS-GEADEEQDSRNDN-STHSNTSETTCNGTYSSDEEPASRRENIWGGEIGATIMAEKEQHHGG------AAPVHASSPVLSLPGPPSPRSREQAGKVSGSSAVMIRDHTFSVSPQARDSAPLSLSLQPVAVFRSRNSNYTPTSQRNRHSSTAIHEPRARCGCRGLTVRVDSGPLGLSLEASYRVGETFVLKQAWSDCAADSGMFAHSMLVSNLPGKVDDDQAGVLDVRLDGRSSSSGLIKVRAVGLERDHVTMTVRTRQGSILNGVPSPPNDSRGSVVGVLELDEGDILVRVDNVQVTKKSFTEVASLLDQAKRPIRLTFVRHACGRRFVGRDHGYGGGGTCRGAARQQPPFRIANCGGWDRCCGMMGKSGCGGKQPPNASCVGRLVSSPLPKIETEADGCPVAVILRARRQLRSGGIEQWCEVVASRRRLWQRLLRNLSPDSHSDRAKLRKLVGCSRSVDEHALKGRTGLVKRTLRNNYQRLISSRKGARKGSNTNGCNKAKRALAAKVWKDVNRTMSPRRHGARPGFFSASQLGGGGHVCPAHFAGGSKHAVFRVAFATASTLQFVSGMSYMAALALVQEPVEAMAYATLATLLQDRVMQALFPLGDVDLLDAYHLCGGRVVTFRTLSAARSPTPSEAAPTGKSGDGRHPFRGQGHRRIVEGDACSKVVSAGSLRKDKATTMCDTGGADRACGWEMGELEEEPTRQVVVDEMLPRLVRIFGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNGMEILLQYGNLTANVSFQEVLRCTLATQSTRVSMGQRRSARHFVL 2817
MSARCNLS+EGKEDDSDEG HETW PGKRVSRTR +SSCILRQALPTTSPIKLRHC QTSNC+ GEADEEQ R+DN STHS TSE+T +GT +SDEEP S+RENIWGG+ GATIM E+ QH AAPVHASSP+LSLPGPP PRSREQAGK S SS VMIRDHTFSVSPQARDSAPLSLS QPVAVFRSRNSNYT +SQ ++HSSTAIHEPRARCGCRGLTVR+DSGPLGLSLEASYRVGET VLKQAWSDCAADSGMFAHSMLVSN PGKVDDDQ VLD+ LDGRSSSSGLIKVRAVGLER+H T TV TRQGS+LNG PSPPN+SRGSVVGVLELDEGDILVRVDNVQVTKKSFTEVASLLDQA+RP RLTFVRHACGRRFVGRD+GYGGGGTCRGAAR +PP R+A CGGWD CCGMMGKSGCGGKQPPNASCVGR+VSSP PKIETEADGCPVAVILRARRQLRSGG+EQW E+VASR LWQRLLRNLSPDSHSDR+ GGGGHVCPAHFAGG+KHAVFRVAFATASTLQFVSG+SYMAAL LVQEP+EAMAYATL TLLQ+RVMQALFPLGDVDLLDAYHLCGGRVVTFR AARSPTPSE A GKSGDG++PFRGQGHRR+ EGD SKVVSAGS R+DKATT+ DTGGADRACGW+MGELEEE VVV EMLPRLVRIFGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNG+EILLQYGNLTANVSFQEVLRC LATQSTRVSMG + + +L
Sbjct: 1 MSARCNLSEEGKEDDSDEGDHETWFPGKRVSRTRQYSSCILRQALPTTSPIKLRHCPQTSNCNYGEADEEQGFRDDNNSTHSYTSESTRSGTCNSDEEPESKRENIWGGDTGATIMVERGQHGDDGDIALVAAPVHASSPLLSLPGPPGPRSREQAGKASSSSTVMIRDHTFSVSPQARDSAPLSLSPQPVAVFRSRNSNYTRSSQ-HKHSSTAIHEPRARCGCRGLTVRIDSGPLGLSLEASYRVGETIVLKQAWSDCAADSGMFAHSMLVSNFPGKVDDDQVRVLDLGLDGRSSSSGLIKVRAVGLERNHATTTVHTRQGSMLNGAPSPPNESRGSVVGVLELDEGDILVRVDNVQVTKKSFTEVASLLDQAERPTRLTFVRHACGRRFVGRDNGYGGGGTCRGAARHKPPCRVAYCGGWDGCCGMMGKSGCGGKQPPNASCVGRVVSSPSPKIETEADGCPVAVILRARRQLRSGGMEQWHELVASRGHLWQRLLRNLSPDSHSDRS---------------------------------------------------------------------------------------GGGGHVCPAHFAGGAKHAVFRVAFATASTLQFVSGISYMAALVLVQEPLEAMAYATLVTLLQERVMQALFPLGDVDLLDAYHLCGGRVVTFRAFGAARSPTPSEPAARGKSGDGQYPFRGQGHRRMAEGDTRSKVVSAGSPREDKATTIRDTGGADRACGWQMGELEEE----VVVGEMLPRLVRIFGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNGLEILLQYGNLTANVSFQEVLRCALATQSTRVSMGATKISTTLLL 814
BLAST of mRNA_Ecto-sp13_S_contig171.5041.1 vs. uniprot
Match: A0A421EX14_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EX14_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 5.610e-7 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 1
Query: 2449 FGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNGMEILLQYGNLTANVSFQEVLRCTLATQ 2766
F + R LP LH HL + + EWFTT ++ +T LA DLF V L DV +R+GLAIL++L L ++ + L ++ L + +V+ LA Q
Sbjct: 49 FEQMFIRDLPKLHAHLMVQGFAVPMYGIEWFTTLFSLSTKTDLACAIFDLFFVGLQDVFLRVGLAILKLLEAKLMCMSFEDFLREFKPLVRELDPYQVILQALALQ 154
BLAST of mRNA_Ecto-sp13_S_contig171.5041.1 vs. uniprot
Match: A0A3F2S3X1_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3X1_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 3.110e-5 Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 1
Query: 2428 LPRLVRIFGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNGMEILLQY 2706
L ++ F + R LP LH HL + + EWFTT ++ +T LA DLF V L DV +R+GLAIL++L L ++ + L ++
Sbjct: 178 LDEYLQHFEQMFIRDLPKLHAHLMVQGFTVPMYGIEWFTTLFSLSTKTDLACAIFDLFFVGLQDVFLRVGLAILKLLEAKLMCMSFEDFLREF 270
BLAST of mRNA_Ecto-sp13_S_contig171.5041.1 vs. uniprot
Match: K3WQH6_GLOUD (Rab-GAP TBC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQH6_GLOUD) HSP 1 Score: 58.2 bits (139), Expect = 6.420e-5 Identity = 35/129 (27.13%), Postives = 63/129 (48.84%), Query Frame = 1
Query: 2449 FGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNGMEILLQYGNLTANVSFQEVLRCTLATQSTRVSMGQRRSA----RHFVLQS 2823
F +R LP LH H+ + + EWFTT ++ +T LA DLF V + D+ +R+GLAIL++L L + + L ++ L + + + L+ + + G+ +A H++L +
Sbjct: 185 FNLMFQRELPDLHQHILSQGFVIPMYGIEWFTTLFSLSTKADLACAIFDLFFVGVQDIFLRMGLAILKLLESKLMCMTFEDFLREFKPLVRQIDPYQAIFQALSFRPNPLVRGEDTTAYISRAHYLLSA 313
BLAST of mRNA_Ecto-sp13_S_contig171.5041.1 vs. uniprot
Match: A0A662WPF7_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPF7_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 8.040e-5 Identity = 33/106 (31.13%), Postives = 54/106 (50.94%), Query Frame = 1
Query: 2428 LPRLVRIFGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTAYARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNGMEILLQYGNLTANVSFQEVL 2745
L ++ F +R LP LH HL + + EWFTT ++ +T LA DLF V + D+ +R+GLAIL++L L + + L ++ L + +V+
Sbjct: 195 LDEYLQHFEVMFRRDLPKLHAHLLAQGFALPMYGIEWFTTLFSLSTKTDLACAIFDLFFVGVQDIFLRVGLAILKLLEAKLMCMTCEDFLREFKLLVRELDPYQVI 300
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 1 |
| Seed ortholog score | 61.6 |
| Seed ortholog evalue | 2.3e-06 |
| Seed eggNOG ortholog | 272952.HpaP805086 |
| Model size | 2873 |
| KEGG ko | ko:K20242 |
| Hectar predicted targeting category | other localisation |
| Exons | 11 |
| EggNOG free text desc. | Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. |
| EggNOG OGs | 3Q8ZI@4776,KOG4436@1,KOG4436@2759 |
| Ec32 ortholog description | Rab-GTPase-TBC domain |
| Ec32 ortholog | Ec-01_009090.1 |
| Cds size | 2871 |
| COG Functional cat. | S |
| Best tax level | Peronosporales |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04131 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462894.6420178-CDS-Ecto-sp13_S_contig171:14504..14609 | 1681462894.6420178-CDS-Ecto-sp13_S_contig171:14504..14609 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 14505..14609 - |
| 1681462894.6525164-CDS-Ecto-sp13_S_contig171:15247..15361 | 1681462894.6525164-CDS-Ecto-sp13_S_contig171:15247..15361 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 15248..15361 - |
| 1681462894.6609764-CDS-Ecto-sp13_S_contig171:15722..15869 | 1681462894.6609764-CDS-Ecto-sp13_S_contig171:15722..15869 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 15723..15869 - |
| 1681462894.6695225-CDS-Ecto-sp13_S_contig171:16677..16785 | 1681462894.6695225-CDS-Ecto-sp13_S_contig171:16677..16785 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 16678..16785 - |
| 1681462894.6803355-CDS-Ecto-sp13_S_contig171:17034..17355 | 1681462894.6803355-CDS-Ecto-sp13_S_contig171:17034..17355 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 17035..17355 - |
| 1681462894.6891334-CDS-Ecto-sp13_S_contig171:17746..17870 | 1681462894.6891334-CDS-Ecto-sp13_S_contig171:17746..17870 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 17747..17870 - |
| 1681462894.699672-CDS-Ecto-sp13_S_contig171:18477..18745 | 1681462894.699672-CDS-Ecto-sp13_S_contig171:18477..18745 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 18478..18745 - |
| 1681462894.7134573-CDS-Ecto-sp13_S_contig171:19236..19294 | 1681462894.7134573-CDS-Ecto-sp13_S_contig171:19236..19294 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 19237..19294 - |
| 1681462894.7277863-CDS-Ecto-sp13_S_contig171:19616..19772 | 1681462894.7277863-CDS-Ecto-sp13_S_contig171:19616..19772 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 19617..19772 - |
| 1681462894.738176-CDS-Ecto-sp13_S_contig171:20108..20405 | 1681462894.738176-CDS-Ecto-sp13_S_contig171:20108..20405 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 20109..20405 - |
| 1681462894.747711-CDS-Ecto-sp13_S_contig171:20648..21821 | 1681462894.747711-CDS-Ecto-sp13_S_contig171:20648..21821 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig171 20649..21821 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig171.5041.1 >prot_Ecto-sp13_S_contig171.5041.1 ID=prot_Ecto-sp13_S_contig171.5041.1|Name=mRNA_Ecto-sp13_S_contig171.5041.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=957bp
MSLREPRRELRVQWANEAEGLPISDPLKSVDHDHHDYHAVVMSARCNLSQ EGKEDDSDEGGHETWSPGKRVSRTRHFSSCILRQALPTTSPIKLRHCQQT SNCSGEADEEQDSRNDNSTHSNTSETTCNGTYSSDEEPASRRENIWGGEI GATIMAEKEQHHGGAAPVHASSPVLSLPGPPSPRSREQAGKVSGSSAVMI RDHTFSVSPQARDSAPLSLSLQPVAVFRSRNSNYTPTSQRNRHSSTAIHE PRARCGCRGLTVRVDSGPLGLSLEASYRVGETFVLKQAWSDCAADSGMFA HSMLVSNLPGKVDDDQAGVLDVRLDGRSSSSGLIKVRAVGLERDHVTMTV RTRQGSILNGVPSPPNDSRGSVVGVLELDEGDILVRVDNVQVTKKSFTEV ASLLDQAKRPIRLTFVRHACGRRFVGRDHGYGGGGTCRGAARQQPPFRIA NCGGWDRCCGMMGKSGCGGKQPPNASCVGRLVSSPLPKIETEADGCPVAV ILRARRQLRSGGIEQWCEVVASRRRLWQRLLRNLSPDSHSDRAKLRKLVG CSRSVDEHALKGRTGLVKRTLRNNYQRLISSRKGARKGSNTNGCNKAKRA LAAKVWKDVNRTMSPRRHGARPGFFSASQLGGGGHVCPAHFAGGSKHAVF RVAFATASTLQFVSGMSYMAALALVQEPVEAMAYATLATLLQDRVMQALF PLGDVDLLDAYHLCGGRVVTFRTLSAARSPTPSEAAPTGKSGDGRHPFRG QGHRRIVEGDACSKVVSAGSLRKDKATTMCDTGGADRACGWEMGELEEEP TRQVVVDEMLPRLVRIFGKALKRRLPALHGHLCKEAIPMSFLCAEWFTTA YARNTPLPLALCALDLFLVRLDDVMIRLGLAILEVLAPSLKMLNGMEILL QYGNLTANVSFQEVLRCTLATQSTRVSMGQRRSARHFVLQSAWPLGVKVV VAFGRST back to topmRNA from alignment at Ecto-sp13_S_contig171:14505..21821- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig171.5041.1 ID=mRNA_Ecto-sp13_S_contig171.5041.1|Name=mRNA_Ecto-sp13_S_contig171.5041.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7317bp|location=Sequence derived from alignment at Ecto-sp13_S_contig171:14505..21821- (Ectocarpus species13 EcNAP12_S_4_19m) ATGTCCTTGCGCGAGCCTCGAAGGGAGCTACGGGTCCAATGGGCAAACGA
GGCAGAGGGTCTTCCAATCTCGGACCCCTTGAAGTCGGTGGATCATGATC
ATCATGACTACCACGCGGTCGTGATGTCAGCTAGATGTAACTTGTCGCAG
GAGGGCAAAGAAGACGACTCCGACGAAGGCGGCCATGAGACGTGGTCCCC
AGGGAAGAGGGTGTCGAGAACGCGGCATTTCTCTTCTTGTATACTGCGGC
AGGCCCTGCCAACAACATCCCCTATCAAGCTAAGGCATTGCCAGCAGACA
TCGAACTGCAGCGGCGAAGCCGACGAAGAACAGGATAGCCGAAACGACAA
CAGCACTCATTCGAATACGTCGGAAACCACTTGCAACGGGACGTACAGTA
GTGACGAAGAGCCAGCAAGCAGGAGGGAGAACATCTGGGGCGGAGAAATT
GGGGCCACAATCATGGCGGAAAAAGAACAACATCATGGTGGCGCTGCTCC
CGTGCACGCTTCGTCGCCTGTGCTATCATTGCCGGGACCACCTAGTCCGA
GGTCTCGTGAGCAAGCGGGGAAAGTATCAGGATCATCAGCGGTGATGATT
AGGGACCACACCTTTTCCGTGTCTCCACAGGCGCGGGATTCTGCCCCGTT
GAGTCTCTCTCTTCAGCCTGTTGCCGTATTCCGTTCAAGAAACAGCAACT
ACACCCCAACCTCCCAACGCAATCGTCACTCGTCCACTGCGATTCATGAA
CCGCGCGCCCGATGCGGTTGCCGTGGCCTCACTGTGCGTGTCGATTCTGG
TCCTCTTGGCCTCTCCCTGGAGGCCAGTTACCGAGTGGGGGAGACGTTTG
TGTTGAAACAGGCGTGGAGTGACTGTGCCGCAGACAGTGGGATGTTCGCG
CACTCCATGCTTGTATCAAACTTACCGGGGAAGGTGGACGATGACCAAGC
CGGGGTCTTGGATGTAAGGCTCGACGGTAGATCGTCATCGTCGGGCCTCA
TCAAGGTTCGGGCGGTAGGCCTCGAACGTGACCACGTGACGATGACCGTC
CGCACTCGCCAAGGCAGCATCCTCAACGGAGTGCCTTCTCCTCCAAATGA
CTCACGCGGGAGCGTCGTAGGAGTCCTCGAGCTGGATGAAGGAGACATAC
TTGTTCGGGTGGATAACGTGCAGGTGTGCACAGCTTGCATTAGTAATTGT
TGTAACAGGAGCCAGAGATTATCACGTTGCTGTTCGAAAGACCCGGATTA
AAATGCTCGTATTTTCACAACCTCCAAGTGCGTACGGCTGGGGGATAATT
TTTTTCAACTGGTGTTTCTTTGTCGGCCGCCTGCAACACATCCACAATGG
CCATGCAGCCTCCTGACGGACCCACATTCTTTCATCTCAACCTTCCTTTT
CGTTCCCATTAAAAAGGTGACGAAGAAAAGCTTTACAGAGGTTGCCAGCC
TTTTGGATCAAGCGAAACGCCCGATCCGCCTAACTTTCGTTCGACACGCG
TGTGGGCGAAGATTTGTCGGCCGTGATCACGGCTACGGCGGTGGTGGAAC
ATGCCGCGGTGCAGCTCGACAGCAGCCCCCCTTTCGGATCGCTAACTGTG
GTGGTTGGGATAGGTGCTGCGGGATGATGGGCAAGTCGGGATGTGGGGGC
AAGCAGCCGCCGAACGCTTCGTGCGTTGGTCGGCTGGTTTCGAGTCCTTT
GCCAAAGATCGAGGTACGTGCACGAACGCTCATGCAGAAATAGAGAGGCA
GAAGTGATCCGCGCCACAAGCAACAAGATTGGGCCATCAGAGATCATCCG
CATGGAATTATTACAGAATGACATTGTTTGCCACCGAAATGGGGTCACGT
CACTTGAAACGAAGCCAGAGAAGACAGCAGTTCCTTCCACATATCGTGCA
TTTTCTGAAGAAAAACGGCATTCAACGAAGTACCGCGAAACGTTCGCCTG
TCGACTACATGCAGAGGAACTCAAACACACACAGTATACGTGCTGATTTC
TGGTAATCCATCCCGGCTTCCCTTTCGGCCACCCGTTACCACACTGTAGA
CCGAAGCGGACGGGTGTCCAGTGGCGGTGATACTGCGTGCACGACGGCAG
CTCCGATCGGGCGGTATAGAGCAGTGGTGCGAGGTAGTAGCATCAAGAAG
GCGCCTTTGGCAGAGGCTGCTGAGAAATCTCTCGCCAGACTCTCACTCGG
ATCGGGTGAGCACACGCTAAATTTGTACAGGATTGGCGCTGCTTAGCCGC
ACACGCTCTTGTGTGTCGGTGTGGTGGTGATGGTTCAACTAGAAGCCACC
GTGCCTCGTGGGCAGGCTTCTTTGAGTGCTCCCGTTGAAGTATGCCATGC
GTATTGTTGGTGCTGCGCCCGATACGAAGCATAGCGAAGCAAGGCTACCA
ATTTCATTATGACGCAATCTATGAGAACGTGTCTCCTACGAGCACGACGT
TCAAGTTATTGACGAAAAAGATCCATTGAAACTGCACACATATGAAACCA
TCATTCTACATTGTCGTCTGTTCGCAGGCAAAACTCCGGAAACTGGTTGG
TTGTTCACGCTCGGTGGATGAGCATGCCTTAAAAGGTATGCAGCTCCGAC
ATCGAAGTATATGGTAGTACCGCTTGTCTTAGGATGCTTGAATTATTCTG
TTGGTCAGTATAACGTCCTGCCCAAACCCGTCGCGTCCACCGCAAGATAG
GACCGGGAATTTCGTAGACAAGCGCCGATTGCTCAAAGCTGAGCATTCGA
GAAGGAAAGTCGCTCATAAAACTTTCAAGGACCTTAGAAAGACCTACGCA
GGGCGGGGAGTACTACAGTAATAGCGCACACACGTCGAATGTACGGGAAC
AAGGTGATTTTGACATATCTCGGTCGAGGCCCATCATTCTCCGACACCCT
GGTCTACCTGGTTCTGTGGTTGCGGTGGCACCTTCTTTCTCATGATACCT
GGCTGTTGGCAAGCAAGGAGGGCTGTAGAAGAGTAAGCAGGCCAGACGCC
GTGTCTGCCTGCCTCGGCGCATTTGTCGCGTTGTAATCGTTCCTTCCCCG
TTCCTCGACCTATCTCAATTTCTCAGGTAGAACAGGGCTTGTCAAGCGTA
CACTCAGGAACAACTATCAGCGCTTGATCAGCAGCCGGAAAGGCGCGCGC
AAAGGCAGCAATACTAATGGCTGCAACAAGGCCAAGAGAGCATTGGCTGC
GAAAGTGTGGAAGGACGTCAATCGTACCATGTCGCCGAGACGCCACGGGG
CGCGCCCTGGATTTTTTTCGGCCTCTCAGTTGGGCGGCGGAGGACACGTA
TGTCCTGCGCACTTCGCGGGAGGGTCCAAACACGCCGTGTTCAGGTGCGT
TCTTGGTAGGGTCACAAAGGAATCCAGGAGATGATGGACTTCTCGATTTC
GCCGATTTCGTGGTGTAGCGCATTGCCAGCGATGAGGGAAAAACGACAGA
AAAGAACGAACTGCAGACCACCTACGTGCAACCTCTCGTTGTGTGTGTTG
TTGCACGGACATGGCATAGCCTAAGAACTTACTGTCGTATATCTTGTTTG
TCTTTTACTACGTTGCGGTTGTGTGGCCTATTCGATGGAATCTAAGCCGG
TCACAAGAAAATATCTACAAGCTCCTCCGAACAATCTATGGGCGCGCGAC
CAGAGTACATGGCGCCGCCCGTTCGGGGTGTTCCTTGAATATTCACTTTG
CCATTGGCGGAGAATTGCCGGCATCGTAGACAAAAAAAGTCAAGCTTGGG
TGTGACCACGATCCGCGAAAATACTTGATTCGGCGACTACCGACGGACGG
TGTGGCAATATACAGCGGGGGAACAAAAAGCGCGTTCAGATTCCGGACGC
CAGTCGCCGGGGTACCACTCATGGGGAACAATTTCCGGCTAAACTGTTCT
AAATCCTCCGTCCCTGTTAATCATCTGCCAATCTTTGGCACCTATTTTCA
GAGTCGCCTTCGCCACGGCATCCACGCTGCAGTTCGTGTCCGGCATGAGC
TACATGGCAGCGCTGGCACTCGTTCAAGAGCCCGTGGAAGCCATGGCTTA
CGCGACGTTGGCCACCTTGCTTCAGGTGCCGTGTACATTCGAATCGTTTG
ATGTGTGACAGTACCTTTTGGGCACGTCACATATGTACCTCGTCAACAAG
AACATGCTCTGTTCGTTGTTGCAGTAACGAGCACCTCGCTTAACATTTTT
TCCTGTTGGTCTACATGCACCCAAGTCAAAGCTACATAAGAAAGACAGAA
TTCTCACCACCCCGGTGTGTCCGGCGTGGAGCGCGACTCGCCCGACCAAA
ATGGTTCCGCCATCAAGTATAACCGAGCCATAAACGCGAGTGATGCTATG
TACATCTACGTACACGAACAAATGGTCCTCCAATGGGACTCTCTCCAAAA
AATCAACGTGCCTCCATCTTTGATACGGCCTCCTCGCCTCTGAAACCCAA
CGGGGACCATTCCCAGGATCGAGTGATGCAGGCTCTGTTTCCGCTAGGCG
ACGTCGATCTACTCGACGCGTACCACCTGTGCGGCGGTCGTGTGGTGACT
TTTCGCACGCTCAGTGCTGCTCGGAGCCCAACGCCCTCCGAAGCTGCCCC
TACGGGGAAGAGTGGTGATGGCCGACATCCGTTTCGTGGCCAGGGGCACC
GACGCATTGTGGAAGGAGATGCTTGTTCCAAAGTGGTCAGCGCTGGTTCT
CTCCGGAAGGATAAAGCCACCACGATGTGCGACACCGGTGGTGCGGACAG
GGCCTGTGGATGGGAAATGGGCGAACTGGAGGAAGAGGTGACAAAATCCA
GCATTTACTTGTCGGAGCATGAGGAGGGGGGGGGGCAATTCTGTTGTTGT
TGTACTCACACACGACCCATCAAGCGAAGCCAGCTAAGAACCTCTACCTC
ACACAACGAGATTGACAGCAGGGGAAACTGTGAAAGCATTCCATGCGCAT
GCTGCCGCAGAGAGGCCGAGTCTTGGAAGCCTGTAACCTGGACGCGCACG
TATTTGTCTTGTTGGTGGTGGTCTGCCACTCGCCAGCCGACCCGGCAGGT
GGTCGTGGACGAGATGCTGCCGCGGCTCGTGCGCATCTTCGGAAAGGCTT
TGAAGCGACGGTTGCCGGCACTTCATGGCCACCTGTGCAAGGAGGTACGG
AAGCTTACCCGCCCTCAGCGAACCGCAAGCACCACAACCTGTAGTCACAC
GAGAGTACGCGCACACGAAAACGGAAATGTTGACGTCAGCGCAAGAAAGC
TCGTGCACATGTTACAAATAACAGCAACCATCACTGCGTCGGTCGCGACA
GAAATCGGATCCTGAACGCCTGCGCCAGTGCTAAAAGGCAAACCCCACGG
TGGATTTTCCGCTCTCGCATTCAACCGTTGCGTATGTAGTCCAGCTCGAG
GATTAGACGAATCAGGGTTTAGGTACTTGGCACATTTCGCGCTTGCCACC
ACGGCCAAAACAACAACGTCTGACATTAGGTTTCCTACTTTTGCCCAGGT
TCCCGTGGATTGGTACCCCACACCGTAACTTCTAGCGGACCAGCGCACAT
GTGTCGCATGTTGCTCGTCGGAGATGTGCAGCCAGGCAGCCATTTCCCTG
CTGATAATCACCACACAACACCCGTCGGCGGATGGAGTGCCGGTCCCCAA
AAAGGAAACATTCTCACAAGAAACAGAGTGTCAGGTTCTTGAAAAAACGA
ACAAACAAGAAACATGACCTAAGAAACTGGGCTCAGCCGCTGGCCATCAT
ATGAAAACATGGTATATGGTAGCTTTCCAAAGCCTGTGTTCAATCTTTGA
GACATCAAGGTCTTGGGCATTTGCTCAGAATGGGCCAACTAGCTTGCCGG
CGTTCTAAGTGGGTTGACACGCCGCACCATATACATCGACCCACAATTTC
CCCTCCGCGATATTCCAATCGAATTATCCGACCTCATTTCTCGTCCGTCC
AGGCGATTCCGATGTCGTTCCTGTGCGCGGAGTGGTTCACCACGGCGTAC
GCGCGCAATACCCCCCTGCCCCTGGCGCTGTGCGCCCTTGACTTGTTCCT
CGTGCGTTTGGACGACGTCATGATCCGTTTGGGCCTCGCTATCCTCGAGG
TTTGACACAGCACAAGATGGGGGAACGCCATCTTTTTCTGATGGTCGTGG
TAGGTGCACGTCCTAGTGATGATCGTCCGTCAGGAACAAGAGGAGACATT
CCCTAGACTTGTGCCGGCGGCCGAACAGACTTCGCTCGTGTCTTCCAAAC
GCGTTGGAGACATGGAGAAAATTTCCGAACGGAGTGCATCTAGGATTGGT
GAATGCTTCGCTCGAGGGTCCTCAAACCTGTGGCTCATTTGGAGGCAAAC
CTCCCAAGCGAAGAGCGCCAAGGAACTGTAAGTGCCGTCGTGCAAAATGG
ACCGACCGCAAACCCCAACCTTGTGAGGTGAAAGAAAACGTAACCTTTTT
ATCTCGACAGGTGTTAGCACCGTCCTTGAAAATGCTGAACGGGATGGAGA
TCTTGCTACAGTACGGAAACCTCACGGCGAACGTTTCCTTCCAAGAGGTG
CTGCGGTGTACGCTGGCCACGCAGGTGAGTGCCGAACATGTGTTCGATAC
GCAATATGGCATGTTCTTCGCCGTGCGAAGTCTGAAATTTGTTTTTATGT
CTTCAAATGTACGCTTTGAAACGGTGGCTACAGCTGCCCAGTCGCCAATG
CCTGGTAGAGTGGTACACCAAGCATTTGACAAAACTACCTCCTATTGTGC
AGGTGTGGATTTGGGTTGTCCGCATAACCAAAGGGGGGGCTCTCAATCAC
CGTTCCACTTTTGAGACGCCTGTAACTTTGCCAGTCGAAACAAGGGCTTT
GAAAAATGTCTTCCTGAAACAGAGAGAATGCAACAATGGATAAGCTTGAA
AAATGTTTTCCCCTCACTTTCATGAAGAAGCAGCTCCAGAATTGACTTGA
GAAAAACGGTGGTAACCAGAAATGCTTGCCTCCTTCTCTATGGCTCTGTT
CCCGCCTCTCCCGTCTGTCTGTCCAATACGAACAGCCGCGGCAGCCTCCC
TTGTTGCAGAAACCCGGCCTTGACATTCCTTTAAGCTCGTCGGAACATCG
GTCCATGGCACCATGCGCACTCAGCTAGCACACCAAGCCAGACGACGGAT
TGGCAATACGGGGCCGTGTTGCTTGGTCAAAACCACCGCATGTTACTCGT
GCGGTTGTACAGAGCACGAGGGTCTCGATGGGGCAACGAAGATCAGCACG
ACACTTCGTCCTCCAGAGCGCATGGCCACTCGGAGTCAAAGTCGTCGTCG
CTTTTGGGCGAAGTACG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig171:14505..21821- >mRNA_Ecto-sp13_S_contig171.5041.1 ID=mRNA_Ecto-sp13_S_contig171.5041.1|Name=mRNA_Ecto-sp13_S_contig171.5041.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2871bp|location=Sequence derived from alignment at Ecto-sp13_S_contig171:14505..21821- (Ectocarpus species13 EcNAP12_S_4_19m) ATGTCCTTGCGCGAGCCTCGAAGGGAGCTACGGGTCCAATGGGCAAACGA GGCAGAGGGTCTTCCAATCTCGGACCCCTTGAAGTCGGTGGATCATGATC ATCATGACTACCACGCGGTCGTGATGTCAGCTAGATGTAACTTGTCGCAG GAGGGCAAAGAAGACGACTCCGACGAAGGCGGCCATGAGACGTGGTCCCC AGGGAAGAGGGTGTCGAGAACGCGGCATTTCTCTTCTTGTATACTGCGGC AGGCCCTGCCAACAACATCCCCTATCAAGCTAAGGCATTGCCAGCAGACA TCGAACTGCAGCGGCGAAGCCGACGAAGAACAGGATAGCCGAAACGACAA CAGCACTCATTCGAATACGTCGGAAACCACTTGCAACGGGACGTACAGTA GTGACGAAGAGCCAGCAAGCAGGAGGGAGAACATCTGGGGCGGAGAAATT GGGGCCACAATCATGGCGGAAAAAGAACAACATCATGGTGGCGCTGCTCC CGTGCACGCTTCGTCGCCTGTGCTATCATTGCCGGGACCACCTAGTCCGA GGTCTCGTGAGCAAGCGGGGAAAGTATCAGGATCATCAGCGGTGATGATT AGGGACCACACCTTTTCCGTGTCTCCACAGGCGCGGGATTCTGCCCCGTT GAGTCTCTCTCTTCAGCCTGTTGCCGTATTCCGTTCAAGAAACAGCAACT ACACCCCAACCTCCCAACGCAATCGTCACTCGTCCACTGCGATTCATGAA CCGCGCGCCCGATGCGGTTGCCGTGGCCTCACTGTGCGTGTCGATTCTGG TCCTCTTGGCCTCTCCCTGGAGGCCAGTTACCGAGTGGGGGAGACGTTTG TGTTGAAACAGGCGTGGAGTGACTGTGCCGCAGACAGTGGGATGTTCGCG CACTCCATGCTTGTATCAAACTTACCGGGGAAGGTGGACGATGACCAAGC CGGGGTCTTGGATGTAAGGCTCGACGGTAGATCGTCATCGTCGGGCCTCA TCAAGGTTCGGGCGGTAGGCCTCGAACGTGACCACGTGACGATGACCGTC CGCACTCGCCAAGGCAGCATCCTCAACGGAGTGCCTTCTCCTCCAAATGA CTCACGCGGGAGCGTCGTAGGAGTCCTCGAGCTGGATGAAGGAGACATAC TTGTTCGGGTGGATAACGTGCAGGTGACGAAGAAAAGCTTTACAGAGGTT GCCAGCCTTTTGGATCAAGCGAAACGCCCGATCCGCCTAACTTTCGTTCG ACACGCGTGTGGGCGAAGATTTGTCGGCCGTGATCACGGCTACGGCGGTG GTGGAACATGCCGCGGTGCAGCTCGACAGCAGCCCCCCTTTCGGATCGCT AACTGTGGTGGTTGGGATAGGTGCTGCGGGATGATGGGCAAGTCGGGATG TGGGGGCAAGCAGCCGCCGAACGCTTCGTGCGTTGGTCGGCTGGTTTCGA GTCCTTTGCCAAAGATCGAGACCGAAGCGGACGGGTGTCCAGTGGCGGTG ATACTGCGTGCACGACGGCAGCTCCGATCGGGCGGTATAGAGCAGTGGTG CGAGGTAGTAGCATCAAGAAGGCGCCTTTGGCAGAGGCTGCTGAGAAATC TCTCGCCAGACTCTCACTCGGATCGGGCAAAACTCCGGAAACTGGTTGGT TGTTCACGCTCGGTGGATGAGCATGCCTTAAAAGGTAGAACAGGGCTTGT CAAGCGTACACTCAGGAACAACTATCAGCGCTTGATCAGCAGCCGGAAAG GCGCGCGCAAAGGCAGCAATACTAATGGCTGCAACAAGGCCAAGAGAGCA TTGGCTGCGAAAGTGTGGAAGGACGTCAATCGTACCATGTCGCCGAGACG CCACGGGGCGCGCCCTGGATTTTTTTCGGCCTCTCAGTTGGGCGGCGGAG GACACGTATGTCCTGCGCACTTCGCGGGAGGGTCCAAACACGCCGTGTTC AGAGTCGCCTTCGCCACGGCATCCACGCTGCAGTTCGTGTCCGGCATGAG CTACATGGCAGCGCTGGCACTCGTTCAAGAGCCCGTGGAAGCCATGGCTT ACGCGACGTTGGCCACCTTGCTTCAGGATCGAGTGATGCAGGCTCTGTTT CCGCTAGGCGACGTCGATCTACTCGACGCGTACCACCTGTGCGGCGGTCG TGTGGTGACTTTTCGCACGCTCAGTGCTGCTCGGAGCCCAACGCCCTCCG AAGCTGCCCCTACGGGGAAGAGTGGTGATGGCCGACATCCGTTTCGTGGC CAGGGGCACCGACGCATTGTGGAAGGAGATGCTTGTTCCAAAGTGGTCAG CGCTGGTTCTCTCCGGAAGGATAAAGCCACCACGATGTGCGACACCGGTG GTGCGGACAGGGCCTGTGGATGGGAAATGGGCGAACTGGAGGAAGAGCCG ACCCGGCAGGTGGTCGTGGACGAGATGCTGCCGCGGCTCGTGCGCATCTT CGGAAAGGCTTTGAAGCGACGGTTGCCGGCACTTCATGGCCACCTGTGCA AGGAGGCGATTCCGATGTCGTTCCTGTGCGCGGAGTGGTTCACCACGGCG TACGCGCGCAATACCCCCCTGCCCCTGGCGCTGTGCGCCCTTGACTTGTT CCTCGTGCGTTTGGACGACGTCATGATCCGTTTGGGCCTCGCTATCCTCG AGGTGTTAGCACCGTCCTTGAAAATGCTGAACGGGATGGAGATCTTGCTA CAGTACGGAAACCTCACGGCGAACGTTTCCTTCCAAGAGGTGCTGCGGTG TACGCTGGCCACGCAGAGCACGAGGGTCTCGATGGGGCAACGAAGATCAG CACGACACTTCGTCCTCCAGAGCGCATGGCCACTCGGAGTCAAAGTCGTC GTCGCTTTTGGGCGAAGTACG back to top
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