mRNA_Ecto-sp13_S_contig17060.5022.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: D7G804_ECTSI (Squalene monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G804_ECTSI) HSP 1 Score: 1174 bits (3038), Expect = 0.000e+0 Identity = 604/623 (96.95%), Postives = 608/623 (97.59%), Query Frame = 1
Query: 1 MYRIVRLWDGSLNRMHFFHLAVPFIGVFASMTYLFGFFGISIISGVMDPPFLSSPAPSPKDRSAAPAAGPPKHFSPTEEGSSDYSLDNPEVIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAATKGGEASRRPCSREGEMPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAAKEEGQEEE-RVTREVRAPLTIVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEDPASKGSRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPWEHERWEN 1866
MYRIVRLWDGSLNRMHFF LAVPFIGVFASMTYLFGFFGISIISGVMDPPFLSSPAPSPKDRSAAPAAGP KHFSPTEEG SDY LD PEVIIVGAGTAGASAAAT ARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAE GGAAA GRRDSVMLYYPESDPENRSELFGKGVKPAAAATA KGGEA RRPCSREGE+PRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAAK EGQEEE RVTREVRAPLT+VADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEDPASKG+RVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLP+PTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPWEHERWEN
Sbjct: 1 MYRIVRLWDGSLNRMHFFPLAVPFIGVFASMTYLFGFFGISIISGVMDPPFLSSPAPSPKDRSAAPAAGPAKHFSPTEEGPSDYGLDKPEVIIVGAGTAGASAAATFARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAEAGGAAAAPGGRRDSVMLYYPESDPENRSELFGKGVKPAAAATA--KGGEAGRRPCSREGEVPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAAKGEGQEEEERVTREVRAPLTVVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEDPASKGTRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPVPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPWEHERWEN 621
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: A0A6H5KHT1_9PHAE (Squalene monooxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT1_9PHAE) HSP 1 Score: 1167 bits (3019), Expect = 0.000e+0 Identity = 598/622 (96.14%), Postives = 605/622 (97.27%), Query Frame = 1
Query: 1 MYRIVRLWDGSLNRMHFFHLAVPFIGVFASMTYLFGFFGISIISGVMDPPFLSSPAPSPKDRSAAPAAGPPKHFSPTEEGSSDYSLDNPEVIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAATKGGEASRRPCSREGEMPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAAKEEGQEEERVTREVRAPLTIVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEDPASKGSRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPWEHERWEN 1866
MYRIVRLWDGSLNRMHFF LAVPFIGVFASMTYLFGFFGIS+ISGVMDPPF+SSPAPS KDRSAAPAAG PK FSPTEEGSSDYSLDNPEVIIVGAGTAGASAAAT ARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAE EGR DSVMLYYPESDPENRSELFGKGVKPAAAA AA KGGEA RRPCSREG +PRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREA K EGQEEERVTREVRAPLT+VADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVP RDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPE PASKG+RVDLQAACFDYLSLGGCYSAGPVGLLSGLSP PW LTTHFFMVAFHGCREHLLP+PTPGGVLRVYRLLHVATKIIMPLLE+EGSTFLAWWPFRKAIQLVLPWEHERWEN
Sbjct: 163 MYRIVRLWDGSLNRMHFFPLAVPFIGVFASMTYLFGFFGISVISGVMDPPFVSSPAPSSKDRSAAPAAGLPKRFSPTEEGSSDYSLDNPEVIIVGAGTAGASAAATFARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAEAEGRLDSVMLYYPESDPENRSELFGKGVKPAAAAAAA-KGGEAGRRPCSREGGVPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAVKGEGQEEERVTREVRAPLTVVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPLRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEGPASKGTRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPAPWALTTHFFMVAFHGCREHLLPVPTPGGVLRVYRLLHVATKIIMPLLEQEGSTFLAWWPFRKAIQLVLPWEHERWEN 783
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: A0A836CDI9_9STRA (Squalene monooxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDI9_9STRA) HSP 1 Score: 643 bits (1658), Expect = 9.370e-219 Identity = 376/644 (58.39%), Postives = 450/644 (69.88%), Query Frame = 1
Query: 1 MYRIVRLWDGSLNRMHFFHLAVPFIGVFASMTYLFGFFGISIISGVM------DPPFLSSPAPSPKDRS------AAPAAGPPKHFSPTEEGSSDYSLDNPEVIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAATKGGEASRRPCSREGEMPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAAKEEGQEE--ERVTREVRAPLTIVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARG-DVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTP---EDPASKG---SRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIP--TPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPWEHERWE 1863
MY ++ W+G+LNRM+ F LA+P +GVFASMTY FGFFGIS ++ V+ +P L S P+ S AA A+GP +P S+ Y+L+ PEV+++GAGTAGAS A A QGR+V L+E+ QDRIVGEL+QPGG+RALE LGL ACA E DSV VDGY +I G +AA +G +L+YP+SDP++ + FG GV AA A G PRGRSFHNC FV RLRE A+AEPNVR+VEGTV+ L+E +GG VVGVRY+ + EG R E+RAPLTIVADGIWSGLR CAN ++P +S+FVGV+V H A+PVPH+HCGHVVLA PSPILIYQIS TETRVLVDVAG MPSAA G LSA L E+ A LP +FR A+LEAVA G +KSMPNRA+ +S+ +PGA+L+GDALNMRHPLTGGGMTVALKDV LL+ LL G D AAVA A+A FH RR HAATIN+LANALY VF+TP +D + G +R LQ ACFDYLSLGG Y+AGP+GLLSGL+P P VL HFFMVA HGCR HLLP+ P VYRLL VA IIMPLLE E ST L+W P RKA+QL+ PWEH RW+
Sbjct: 1 MYSFLKEWEGALNRMNVFKLALPGLGVFASMTYFFGFFGISFVNSVLGTDNQAEPCELDSDKPNNSSGSNVDEATAAVASGPYARSAPAS--SAKYTLEQPEVVVIGAGTAGASLAIAFAWQGRRVTLIEKSFVLQDRIVGELMQPGGMRALETLGLAACATERCDSVRVDGYTVILP--PGVSAARPDGAE--AVLHYPDSDPDSLLQQFGAGVTLEQAAAAGGAG-------------APRGRSFHNCNFVARLREVARAEPNVRMVEGTVTQLVE-EGGAVVGVRYKVRSGGEGGGYVCARPVHELRAPLTIVADGIWSGLRACANPHKPLLISSFVGVIVTHPPMASPVPHRHCGHVVLAQPSPILIYQISPTETRVLVDVAGKMPSAATGALSAFLVEQ-ARWLPPVFRAAYLEAVAAGGSIKSMPNRALASSAKLKPGAILIGDALNMRHPLTGGGMTVALKDVALLATLLGGADLADRAAVARASAAFHRRRRGHAATINVLANALYAVFTTPVCSDDDGNGGDVTARSHLQDACFDYLSLGGAYAAGPIGLLSGLTPRPGVLAAHFFMVAAHGCRAHLLPLGFLNPRRWRHVYRLLSVACGIIMPLLEVERSTPLSWLPVRKAVQLLFPWEHLRWD 623
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: A0A4D9D9N2_9STRA (Squalene monooxygenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9N2_9STRA) HSP 1 Score: 488 bits (1256), Expect = 1.030e-157 Identity = 297/592 (50.17%), Postives = 366/592 (61.82%), Query Frame = 1
Query: 271 VIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAA-----------------------------------TKGGEASRRPCSREGEM--------------------PRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALL----EGDGGEVVGVRY-----REAAKEEGQE-EERVTREVRAPLTIVADGIWSGLRKCAN-TNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLR-GVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEDPASKGSRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPW 1845
+II+GAGTAGA+AA LA +G KVLL ER MS QDRIVGELLQPGG+RALERLGLD CAKEG DSV VDGY + + E + S++L YP DP ELFG + P+ ++ AA TK A P S G + P+GRSFHN RFVQRLR A AEPNV VV G VS LL + V+GV Y R +G+E EE+ R APLT+VADG+WS LR + +P +LS+FVG+++ H A+P+PH HCGHVVLA PSP+L+YQISSTETRVLVD+ G MPSA+ G L+ +L PQLP + + F AVARG+ KSMPNR+MPA++V R G L++GDALNMRHPLTGGGMTVAL+DVE L LL D AA+ RF R+A AATIN+LANAL+ VFSTP A +R DL+ ACFDYLS+GG + GP+ LLSGL+P P +L HFF+VAFHG R++L P+P+ GG+ R Y +L VA +IIMPLL E ST LA WP R + L+ P+
Sbjct: 94 IIIIGAGTAGAAAAVGLAERGFKVLLFERDMSLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVHVDGYVVFTPPQHKKEGGE---KVQSILLKYPAYDPATLKELFGV-IDPSPSSPAADRPTLSLSPPRFSEKEGGKLVHGAGRAVTPPFPEGTKVTHAPNPPSSPSGHLSMPPSPSFPSAAHQGPTSLHPQGRSFHNGRFVQRLRARALAEPNVTVVNGIVSRLLYAEPDSPTSRVIGVEYKIGTGRRLRTADGEEVEEKEVRRAMAPLTLVADGLWSSLRTHVDKAAKPTQLSSFVGLILSHPPMASPLPHPHCGHVVLADPSPVLLYQISSTETRVLVDIFGRMPSASTGDLAHYLSTHIQPQLPPVLQAPFAAAVARGEFKSMPNRSMPAANVDRDGVLMVGDALNMRHPLTGGGMTVALRDVEALCYLLETSTDLGDPAAMRVLKGRFARERKAWAATINVLANALHAVFSTP---AGNPTRKDLRDACFDYLSVGGYCAGGPINLLSGLTPRPSILALHFFLVAFHGVRKYLWPVPSWGGLGRTYEMLQVACEIIMPLLSVEKSTVLAAWPVRALVGLIFPY 678
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: A0A6G0XPP6_9STRA (Squalene monooxygenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPP6_9STRA) HSP 1 Score: 434 bits (1115), Expect = 1.780e-137 Identity = 255/536 (47.57%), Postives = 327/536 (61.01%), Query Frame = 1
Query: 256 LDNP--EVIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAATKGGEASRRPCSREGEMPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEV---VGVRYREAAKEEGQEEERVTREVRAPLTIVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEDPAS-KGSRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPW 1845
++NP +VIIVGAGT G S A LA+QG+KV +VE+ M QDR VGEL+QPGGL+AL +LGL CA+ TD V+ GY +I +D++ML YP+ P+N E G R + G+ GR FHN FVQRLRE EPNV +VEGTV+ LL D + G++YR A E + E APL IV+DG+WSGLR+ + + P+++S+FV VL+ H A VP + GHV+LA PSPIL+YQIS TETRVLVDV G +PS++ G L+ HL APQ+P R AF+EAV G VK+MPNR + ++LGD NMRHPLTGGGMTVALKDV LLSELLR V +A +A+ F R H++T+NILANALYHVFS P D + +RV L+ +C++YL +GG + AGP+GLL L+P P +L HFFMVA + L P PTP +L YR+ H A IIMPLLE E T LAW P + L+ P+
Sbjct: 125 IENPAADVIIVGAGTTGCSMAIALAKQGKKVFIVEKTMEYQDRFVGELMQPGGLQALRKLGLIECAETETD-VLTKGYTVILD------------EKDNIMLPYPDRVPQNFWEFLGVF------------------RNDNGTGKQY-GRCFHNGGFVQRLRERLMKEPNVTIVEGTVTKLLMADDAKANVCTGIQYRRRAPTE--DVEMPVESATAPLVIVSDGLWSGLRRDLSKDSPKQISSFVAVLMTHPKMEATVPCRQFGHVILAQPSPILMYQISPTETRVLVDVPGKVPSSSSGALTEHLISYVAPQIPKESRAAFIEAVKTGPVKTMPNREFMTTQPSIGRVIMLGDTFNMRHPLTGGGMTVALKDVVLLSELLRDVDVTKSADIAAVRRTFERERVHHSSTVNILANALYHVFSVPLDGSDVAAARVTLRESCYEYLKMGGMFMAGPLGLLCALTPKPMILALHFFMVAGYAASRCLRPFPTPARLLHCYRVFHQACIIIMPLLERENVTVLAWAPLCALVNLIFPY 626
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: A0A1V9ZRK4_9STRA (Squalene monooxygenase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRK4_9STRA) HSP 1 Score: 430 bits (1105), Expect = 4.620e-136 Identity = 248/534 (46.44%), Postives = 331/534 (61.99%), Query Frame = 1
Query: 250 YSLDNPE--VIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAATKGGEASRRPCSREGEMPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVV-GVRYREAAKEEGQEEERVTREVRAPLTIVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEDPASKGSRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLP 1842
Y+ NP+ VII+G GT G + A LA+QG+KVL+ E+ + QDR VGEL+QPGGL AL L L CA+ TD + DGY I+++ + G D V+L YPE P+ E G SR P + GR FHN +FV RLR A NV +EGTV+ L+ ++ GV+YR A E + + + +APL IV DG+WSGLR+ +T++P+++S+F+ +L+KH A A VP + GHV+LA PSPI++YQIS TETRVLVDV G +PS ++G L+ HL E APQ+P AF++AV G VKSMPNR + +++GD+ NMRHPLTGGGM+VAL+D LLS+LL V F DA A+A A F R H++TINILANALYHVF+ P+ ++ +R DL+ +C+ YL LGG +S+GP+GLL L+P P+VL THFFMVA + L P+PTPG +L YR+ H A IIMPLLE E T LAW P I ++ P
Sbjct: 118 YAEPNPDADVIIIGGGTTGCAMAMGLAKQGKKVLVFEKTLEYQDRFVGELMQPGGLDALRSLDLLDCAETETD-IKADGYYILKTKK---------GSEDHVVLPYPERIPKTFLEYLGY-----------------SRAPNGTAKQY--GRGFHNGKFVDRLRAKVFAHENVTCIEGTVTKLISDTKTDICRGVQYRRKAPAE--DVDMPVEQAKAPLVIVCDGLWSGLRRELSTDQPKQISSFIAILMKHPAMEASVPFRGYGHVILAEPSPIVVYQISPTETRVLVDVPGKVPSQSNGDLTKHLLEVVAPQMPEASHAAFIQAVNEGPVKSMPNREFMTTQPSLGRCIMIGDSWNMRHPLTGGGMSVALRDAVLLSDLLGKVDFVDADAIAQARHTFEETRVNHSSTINILANALYHVFAIPDGYSNVAAREDLRESCYQYLKLGGMFSSGPLGLLCALTPKPFVLATHFFMVAGYAASRVLGPVPTPGRLLHCYRVFHEACMIIMPLLERENVTILAWTPLACLINVIFP 620
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: W4HAJ6_9STRA (Squalene monooxygenase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAJ6_9STRA) HSP 1 Score: 423 bits (1088), Expect = 1.920e-133 Identity = 254/545 (46.61%), Postives = 325/545 (59.63%), Query Frame = 1
Query: 247 DYSLDNP--EVIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAATKGGEASRRPCSREGEMPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALL-----EGDGGEVVGVRYREAAKEEGQEEERVTREVRAPLTIVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRA-MPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTP----EDPASKGSRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPW 1845
D +DNP +VIIVGAGTAG S A LA+QGRKVL++E+ + QDR VGEL+QPGGL AL L L CA+ TD V GY+I+ D +ML YP+ P E G R + G+ GR FHN FVQRLR AEPNV VVEGTVS LL + G+++R A + E T APL I +DG+WSGLR+ +T+ P+++S+FV +L+ H A A VP ++ GHV+LAHPSPIL+YQIS TETRVLVDV G +PS+++G L+ HL APQ+P R AF+ AV G VKSMPNR M H ++LGD NMRHPLTGGGM+VALKDV LL+ LL+ V VA+ F R H++T+NILANALYH+FS P +D +R L+ +C++YL +GG + AGP+GLLS L+P P+VL THFFMVA + L P PTP + +++ H A IIMPLLE E T LAW P R I ++ P+
Sbjct: 119 DVKIDNPSADVIIVGAGTAGCSMAVGLAKQGRKVLVIEKSLEYQDRFVGELMQPGGLEALRSLDLIECAETSTD-VKTLGYSILLP------------HSDHIMLPYPDRAPHTFLEYMGLS------------------RADNGTGKQ-HGRGFHNGAFVQRLRARMLAEPNVTVVEGTVSKLLLEQPAKSSTSVCTGIQFRRKALSDDVEMPVET--ASAPLVIASDGLWSGLRRDLSTDVPKQISSFVAILMTHPAMEATVPFRNFGHVILAHPSPILMYQISPTETRVLVDVPGKVPSSSNGDLTKHLLTHVAPQIPDASRAAFVRAVETGPVKSMPNREFMTTQPAHIGRVVMLGDTFNMRHPLTGGGMSVALKDVVLLNNLLKNVDLSSGKDVAAVRRAFEQDRVHHSSTVNILANALYHIFSVPSADDDDKHVLAARATLRESCYEYLKMGGVFMAGPLGLLSALTPKPFVLATHFFMVAGYAAIRCLAPFPTPYRLYHCFQVFHQACVIIMPLLERENVTILAWAPLRALINVIFPY 629
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: A0A397E4M2_9STRA (Squalene monooxygenase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E4M2_9STRA) HSP 1 Score: 423 bits (1087), Expect = 5.970e-131 Identity = 254/545 (46.61%), Postives = 325/545 (59.63%), Query Frame = 1
Query: 247 DYSLDNP--EVIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAATKGGEASRRPCSREGEMPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALL-----EGDGGEVVGVRYREAAKEEGQEEERVTREVRAPLTIVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRA-MPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTP----EDPASKGSRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPW 1845
D +DNP +VIIVGAGTAG S A LA+QGRKVL++E+ + QDR VGEL+QPGGL AL L L CA+ TD V GY+I+ D +ML YP+ P E G R + G+ GR FHN FVQRLR AEPNV VVEGTVS LL + G+++R A + E T APL I +DG+WSGLR+ +T+ P+++S+FV +L+ H A A VP ++ GHV+LAHPSPIL+YQIS TETRVLVDV G +PS+++G L+ HL APQ+P R AF+ AV G VKSMPNR M H ++LGD NMRHPLTGGGM+VALKDV LL+ LL+ V VA+ F R H++T+NILANALYH+FS P +D +R L+ +C++YL +GG + AGP+GLLS L+P P+VL THFFMVA + L P PTP + +++ H A IIMPLLE E T LAW P R I ++ P+
Sbjct: 310 DVKIDNPSADVIIVGAGTAGCSMAVGLAKQGRKVLVIEKSLEYQDRFVGELMQPGGLEALRSLDLIECAETSTD-VKTLGYSILLP------------HSDHIMLPYPDRAPHTFLEYMGLS------------------RADNGTGKQ-HGRGFHNGAFVQRLRARMLAEPNVTVVEGTVSKLLLEQPAKSSTSVCTGIQFRRKALSDDVEMPVET--ASAPLVIASDGLWSGLRRDLSTDVPKQISSFVAILMTHPAMEATVPFRNFGHVILAHPSPILMYQISPTETRVLVDVPGKVPSSSNGDLTKHLLTHVAPQIPDASRAAFVRAVETGPVKSMPNREFMTTQPAHIGRVVMLGDTFNMRHPLTGGGMSVALKDVVLLNNLLKNVDLSSGKDVAAVRRAFEQDRVHHSSTVNILANALYHIFSVPSADDDDQHVLAARATLRESCYEYLKMGGVFMAGPLGLLSALTPKPFVLATHFFMVAGYAAIRCLAPFPTPYRLYHCFQVFHQACVIIMPLLERENVTVLAWAPLRALINVIFPY 820
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: A0A485KQF9_9STRA (Squalene monooxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQF9_9STRA) HSP 1 Score: 416 bits (1068), Expect = 1.580e-130 Identity = 247/532 (46.43%), Postives = 319/532 (59.96%), Query Frame = 1
Query: 268 EVIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAATKGGEASRRPCSREGEMPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVV-GVRYREAAKEEGQEEERVTREVRAPLTIVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTP-----EDPASKGSRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPW 1845
+VII+G GTAGAS A LA+QGRKVL+ E+ + QDR VGEL+QPGGL+AL LGL CA+ D ++ GY ++ + D + L YP+ P+ E G R + G+ GR FHN FVQRLR AEPNV V+EGTVS LL+ D V GV YR A + + + T + APL IV+DG+WSGLR + ++P+ +S+FV VL+ H A VP + GHV+LA PSPIL+YQIS TETRVLVDV G +PS + G L AHL APQ+P R AF+EAV G VKSMPNR + ++LGD+ NMRHPLTGGGMTVALKDV LL++LL+ AA VA+ F R H++T+NILANALY +FS P DP R L+ +CF+YL +GG +SAGP+GLL L+P P++L HFFMVA + L P P+P ++ +++ H A +IIMPLLE E T LAW P I L+ P+
Sbjct: 130 DVIIIGGGTAGASMAVGLAKQGRKVLVFEKTLEYQDRFVGELMQPGGLQALRTLGLLDCAETEND-IMTHGYYVLT-------------KDDHIHLPYPDRVPQTFLEYLGVS------------------RADNGTGKQY-GRGFHNGAFVQRLRARLLAEPNVTVIEGTVSKLLQADKANVCQGVVYRRKAPSD--DVDMPTEQATAPLVIVSDGLWSGLRGALSNDKPKLISSFVAVLMTHPKMEATVPFRQHGHVILAEPSPILMYQISQTETRVLVDVPGKVPSQSSGALEAHLLTHVAPQIPDASRAAFIEAVKTGPVKSMPNREFMTTQPTMGRVIMLGDSFNMRHPLTGGGMTVALKDVVLLNDLLKDADLTRAADVAAVRRAFELERIHHSSTVNILANALYFIFSVPADDDGSDPRRALVRETLRESCFEYLKMGGMFSAGPLGLLCALTPKPFILALHFFMVAGYAGWRCLKPFPSPSRLVLCFQVFHEACRIIMPLLERENVTILAWPPLCALINLIFPY 626
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Match: A0A024UQZ3_9STRA (Squalene monooxygenase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQZ3_9STRA) HSP 1 Score: 414 bits (1064), Expect = 7.810e-130 Identity = 252/550 (45.82%), Postives = 321/550 (58.36%), Query Frame = 1
Query: 247 DYSLDNP--EVIIVGAGTAGASAAATLARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAETEGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAATKGGEASRRPCSREGEMPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALL-----EGDGGEVV-GVRYREAAKEEGQEEERVTREVRAPLTIVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPG-ALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPE------DPASKGSRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPIPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPWEH 1851
D +DNP +VI+VGAGTAG S A LA+QGRKVL+VE+ + QDR VGEL+QPGGL AL L L CA+ D V GY+I+R D +ML YP P+ E G R + G+ GR FHN FVQRLR AEPN+ VVEGTVS L+ +G V G+++R K + E APL I +DG+WSGLR+ + ++P+++S+FV +L+ H A A VP + GHV+LA PSPIL+YQIS TETRVLVDV G +PS+ +G L+ HL APQ+P R AF+ AV G VKSMPNR + G ++LGD NMRHPLTGGGM+VALKDV LL+ELL+ V VA+ F R H++T+NILANALYH+FS P D A +R L+ +C++YL +GG + AGP+GLLS L+P P VL THFFMVA L P PTP V ++ H A IIMPLLE E T AW P R I ++ P+ +
Sbjct: 121 DVKIDNPSADVIVVGAGTAGCSIAMGLAKQGRKVLVVEKSLEYQDRFVGELMQPGGLEALRSLDLIDCAETSMD-VKTLGYSILRP------------HHDHIMLPYPNCAPKTLIEYMG------------------FTRNDNGTGKQ-HGRGFHNGAFVQRLRARILAEPNITVVEGTVSKLVLEPTTKGSQSNVCKGIQFRR--KSPSDDVEMPVETALAPLVIASDGLWSGLRRDLSKDQPKQISSFVALLMTHPAMEATVPFRQFGHVILAQPSPILMYQISPTETRVLVDVPGKVPSSTNGDLTKHLLSHVAPQIPEASRAAFIRAVETGPVKSMPNREFMTTQPANIGRVVMLGDTFNMRHPLTGGGMSVALKDVVLLNELLKNVDLSSGKEVAAVRRAFEQDRVHHSSTVNILANALYHIFSVPSTDDDVVDKAVLAARATLRESCYEYLKMGGFFMAGPLGLLSALTPKPVVLATHFFMVAGFAASRCLAPFPTPSRVYHCCQVFHQACIIIMPLLERENVTIFAWAPLRAMINVIFPYRN 636 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17060.5022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17060.5022.1 >prot_Ecto-sp13_S_contig17060.5022.1 ID=prot_Ecto-sp13_S_contig17060.5022.1|Name=mRNA_Ecto-sp13_S_contig17060.5022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=623bp MYRIVRLWDGSLNRMHFFHLAVPFIGVFASMTYLFGFFGISIISGVMDPPback to top mRNA from alignment at Ecto-sp13_S_contig17060:200..3380- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17060.5022.1 ID=mRNA_Ecto-sp13_S_contig17060.5022.1|Name=mRNA_Ecto-sp13_S_contig17060.5022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3181bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17060:200..3380- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17060:200..3380- >mRNA_Ecto-sp13_S_contig17060.5022.1 ID=mRNA_Ecto-sp13_S_contig17060.5022.1|Name=mRNA_Ecto-sp13_S_contig17060.5022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1869bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17060:200..3380- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |