prot_Ecto-sp13_S_contig1706.5021.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1706.5021.1
Unique Nameprot_Ecto-sp13_S_contig1706.5021.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length142
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1706.5021.1 vs. uniprot
Match: A0A6H5KCU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU2_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.470e-8
Identity = 65/78 (83.33%), Postives = 65/78 (83.33%), Query Frame = 0 
Query:    1 MPRQSHQVSSPATIASSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAGSPEQVPPDRELQYLCPRTGCNTNLLLK 78
            MPRQS Q SSPAT     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SPEQVP DRELQYLCPRTGCNTNL LK
Sbjct:    1 MPRQSRQASSPATKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPEQVPADRELQYLCPRTGCNTNLFLK 78
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BLAST of mRNA_Ecto-sp13_S_contig1706.5021.1 vs. uniprot
Match: D8LET1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET1_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 2.600e-6
Identity = 24/28 (85.71%), Postives = 25/28 (89.29%), Query Frame = 0 
Query:   51 GSPEQVPPDRELQYLCPRTGCNTNLLLK 78
            GSPEQVP DRELQ+LCP TGCNTNL LK
Sbjct:   53 GSPEQVPADRELQHLCPGTGCNTNLFLK 80
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BLAST of mRNA_Ecto-sp13_S_contig1706.5021.1 vs. uniprot
Match: D7FWQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ2_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 1.500e-5
Identity = 23/28 (82.14%), Postives = 23/28 (82.14%), Query Frame = 0 
Query:   51 GSPEQVPPDRELQYLCPRTGCNTNLLLK 78
            GS EQVP DRE QYLCP TGCNTNL LK
Sbjct:   83 GSAEQVPADRESQYLCPGTGCNTNLFLK 110
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1706.5021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KCU2_9PHAE2.470e-883.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LET1_ECTSI2.600e-685.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWQ2_ECTSI1.500e-582.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1706contigEcto-sp13_S_contig1706:9517..10471 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1706.5021.1mRNA_Ecto-sp13_S_contig1706.5021.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1706 9419..10571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1706.5021.1 ID=prot_Ecto-sp13_S_contig1706.5021.1|Name=mRNA_Ecto-sp13_S_contig1706.5021.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=142bp
MPRQSHQVSSPATIASSSTAGSSPPAASMAASTPPPARGAGSSASAGSSA
GSPEQVPPDRELQYLCPRTGCNTNLLLKGKYPRRQGLLPRLQELERRHLR
VNRPVDQVPLKGLLALRLRVRGRRSGVGIHHPRRGTLGVLY*
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