mRNA_Ecto-sp13_S_contig17044.5014.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig17044.5014.1
Unique Name	mRNA_Ecto-sp13_S_contig17044.5014.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: TBA2_PELFA (Tubulin alpha-2 chain n=45 Tax=cellular organisms TaxID=131567 RepID=TBA2_PELFA)

HSP 1 Score: 374 bits (960), Expect = 3.110e-127
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV
Sbjct:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: F0YR93_AURAN (Tubulin alpha chain n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YR93_AURAN)

HSP 1 Score: 357 bits (917), Expect = 2.900e-122
Identity = 171/182 (93.96%), Postives = 176/182 (96.70%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRECI IHIGQ GIQ GNACWEL+CLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFL FHATGGGTGSGLGSL+LERLSVDYGRKSKLSF I+PAPQ++ AVV
Sbjct:    1 MRECICIHIGQGGIQGGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLAFHATGGGTGSGLGSLILERLSVDYGRKSKLSFCISPAPQISNAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A7S3ASU3_9EUKA (Tubulin alpha chain (Fragment) n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ASU3_9EUKA)

HSP 1 Score: 347 bits (890), Expect = 2.290e-120
Identity = 167/182 (91.76%), Postives = 176/182 (96.70%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRE ISIH+GQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG+GKHVPR V+VDLEPTV DEVRTGTYRQLYHPEQ+ISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGF+VF+A GGGTGSGLG+LLLERLSVDYGRKSKLSF I P+PQV+TAVV
Sbjct:   10 MREVISIHLGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGSGKHVPRCVFVDLEPTVVDEVRTGTYRQLYHPEQLISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFVVFNAVGGGTGSGLGALLLERLSVDYGRKSKLSFTIYPSPQVSTAVV 191

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: T0QZD2_SAPDV (Tubulin alpha chain n=9 Tax=Eukaryota TaxID=2759 RepID=T0QZD2_SAPDV)

HSP 1 Score: 349 bits (896), Expect = 1.640e-119
Identity = 169/182 (92.86%), Postives = 175/182 (96.15%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRE ISIH+GQ GIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAV VDLEP+VCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVF+A GGGTGSGLG+LLLERLSVDYGRKSKL F I P+PQV+TAVV
Sbjct:    1 MREVISIHLGQGGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVLVDLEPSVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGALLLERLSVDYGRKSKLGFTIYPSPQVSTAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: Q1PGA4_STRAF (Tubulin alpha chain (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=Q1PGA4_STRAF)

HSP 1 Score: 345 bits (885), Expect = 1.820e-119
Identity = 165/182 (90.66%), Postives = 173/182 (95.05%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSD T+GGGDDAFNTFFSETGAGKHVPRAV+VDLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFHA GGGTGSGLGSLLLERLSVDYG+KSKL F I P+P V+TAVV
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPHVSTAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A835U631_VANPL (Tubulin alpha chain n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A835U631_VANPL)

HSP 1 Score: 345 bits (885), Expect = 4.690e-119
Identity = 164/182 (90.11%), Postives = 175/182 (96.15%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPRAV+VDLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF+A GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+T+VV
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A1W0A2F4_9STRA (Tubulin alpha chain (Fragment) n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1W0A2F4_9STRA)

HSP 1 Score: 343 bits (881), Expect = 6.890e-119
Identity = 163/182 (89.56%), Postives = 174/182 (95.60%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRE +SIH+GQ GIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPRAV+VDLEP+VCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVD VLDR+RKLAD+CTGLQGF+VF+A GGGTGSGLGSLLLERLSVDYGRKSKL F I P+PQV+TAVV
Sbjct:    1 MREILSIHLGQGGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPSVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDQVLDRVRKLADSCTGLQGFMVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQVSTAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A8K0H3D6_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0H3D6_9ROSA)

HSP 1 Score: 345 bits (885), Expect = 8.790e-119
Identity = 163/182 (89.56%), Postives = 174/182 (95.60%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMP DKT+GGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFHA GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+T+VV
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: UPI00200EFFA3 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00200EFFA3)

HSP 1 Score: 343 bits (879), Expect = 1.660e-118
Identity = 162/182 (89.01%), Postives = 175/182 (96.15%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMP DKT+GGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF++ GGGTGSGLGSLLLERLSVDYG+KSKLSF + P+PQV+T+VV
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLSFTVYPSPQVSTSVV 182

[Close]

BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A1Y2C0Z2_9FUNG (Tubulin alpha chain n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0Z2_9FUNG)

HSP 1 Score: 344 bits (882), Expect = 1.780e-118
Identity = 160/182 (87.91%), Postives = 175/182 (96.15%), Query Frame = 1

Query:   10 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 555
            MRECISIH+GQAG+Q GNACWELYCLEHGIQPDGQMPSDKTIGGGDD+FNTFFSETGAGKHVPR V+VDLEPTV DEVRTGTYRQL+HPEQ+I+GKEDAANNYARGHYT+GKEI+DLVLDRIRKLADNCTGLQGFLVFH+ GGGTGSG G+LLLERLSVDYG+KSKL F++ PAPQV+TAVV
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRTVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADNCTGLQGFLVFHSFGGGTGSGFGALLLERLSVDYGKKSKLEFSVYPAPQVSTAVV 182

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
TBA2_PELFA	3.110e-127	100.00	Tubulin alpha-2 chain n=45 Tax=cellular organisms ...	[more]
F0YR93_AURAN	2.900e-122	93.96	Tubulin alpha chain n=1 Tax=Aureococcus anophageff...	[more]
A0A7S3ASU3_9EUKA	2.290e-120	91.76	Tubulin alpha chain (Fragment) n=2 Tax=Haptolina e...	[more]
T0QZD2_SAPDV	1.640e-119	92.86	Tubulin alpha chain n=9 Tax=Eukaryota TaxID=2759 R...	[more]
Q1PGA4_STRAF	1.820e-119	90.66	Tubulin alpha chain (Fragment) n=4 Tax=Eukaryota T...	[more]
A0A835U631_VANPL	4.690e-119	90.11	Tubulin alpha chain n=2 Tax=Mesangiospermae TaxID=...	[more]
A0A1W0A2F4_9STRA	6.890e-119	89.56	Tubulin alpha chain (Fragment) n=2 Tax=Saprolegnia...	[more]
A0A8K0H3D6_9ROSA	8.790e-119	89.56	Uncharacterized protein n=1 Tax=Rhamnella rubriner...	[more]
UPI00200EFFA3	1.660e-118	89.01	hypothetical protein n=1 Tax=Escherichia coli TaxI...	[more]
A0A1Y2C0Z2_9FUNG	1.780e-118	87.91	Tubulin alpha chain n=1 Tax=Rhizoclosmatium globos...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig17044	contig	Ecto-sp13_S_contig17044:189..2330 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	0
Start	1
Seed ortholog score	374.4
Seed ortholog evalue	3e-101
Seed eggNOG ortholog	2880.D7G923
Model size	555
KEGG ko	ko:K07374
KEGG Pathway	ko04145,ko04210,ko04530,ko04540,ko05130,map04145,map04210,map04530,map04540,map05130
Hectar predicted targeting category	other localisation
Exons	3
EggNOG free text desc.	structural constituent of cytoskeleton
EggNOG OGs	COG5023@1,KOG1376@2759
Cds size	546
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03019,ko03036,ko04147,ko04812

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462892.9398618-CDS-Ecto-sp13_S_contig17044:188..565	1681462892.9398618-CDS-Ecto-sp13_S_contig17044:188..565	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig17044 189..565 -
1681462892.9523087-CDS-Ecto-sp13_S_contig17044:1843..1963	1681462892.9523087-CDS-Ecto-sp13_S_contig17044:1843..1963	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig17044 1844..1963 -
1681462892.9621384-CDS-Ecto-sp13_S_contig17044:2272..2321	1681462892.9621384-CDS-Ecto-sp13_S_contig17044:2272..2321	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig17044 2273..2321 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462892.9724867-UTR-Ecto-sp13_S_contig17044:2321..2330	1681462892.9724867-UTR-Ecto-sp13_S_contig17044:2321..2330	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig17044 2322..2330 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig17044.5014.1	prot_Ecto-sp13_S_contig17044.5014.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig17044 189..2321 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig17044:189..2330-
coding sequence from alignment at Ecto-sp13_S_contig17044:189..2330-

protein sequence of mRNA_Ecto-sp13_S_contig17044.5014.1

>prot_Ecto-sp13_S_contig17044.5014.1 ID=prot_Ecto-sp13_S_contig17044.5014.1|Name=mRNA_Ecto-sp13_S_contig17044.5014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFN
TFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAA
NNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG
SLLLERLSVDYGRKSKLSFAITPAPQVATAVV

mRNA from alignment at Ecto-sp13_S_contig17044:189..2330-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig17044.5014.1 ID=mRNA_Ecto-sp13_S_contig17044.5014.1|Name=mRNA_Ecto-sp13_S_contig17044.5014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2142bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17044:189..2330- (Ectocarpus species13 EcNAP12_S_4_19m)
CCTGTAACCATGCGTGAGTGCATCTCCATCCACATTGGCCAGGCCGGCAT
CCAGACCGGTGAGCGAACGAGGAGACGAGTTTGATTGGAATTCCACCGTG
CAATTTGACTCGATTTGTGAGGAAGGCGTGTTGTGGTTCGACCAACGCCA
ACACGATGCGGTGTGCGTGCGTCCACCGATGATCCTGAAGGATCGATTCC
TGAGGATTGTTTGTCTGTGGTGCCCACCCGCAGTATCCCTCTCTGGTTCT
CTCGTCTGCCCGCTCTTGTCTGTAGCTCATCTCTCTTCGTCGAAGAGCCA
ACCGACATCACCATCTTGTCTAAAATGTCGTCATTTTAAACTCGATCCTT
TTTCCCGCCGCGCGCAGGTAACGCTTGCTGGGAGCTCTACTGCCTGGAGC
ACGGCATCCAGCCCGATGGGCAGATGCCCTCGGACAAGACCATCGGCGGC
GGTGATGACGCCTTCAACACCTTTTTCTCGGAGACTGGTGAGTGCGGCAG
GATACAACACATGTTGTAATTTCTACGAGTGTGTGCATCAACCACCGAGA
AGCAACGCCAAAAGTGCAACGGTTTTTGATTTTTCGACCATGTCGGTCGT
CCCTATCTGCTGAACGCCGAAAAGATACGTATGCCATTCATGATCACGCC
TACGAATATTGATGCACCCTTGCCTCCCCCTCTGATCCCGGGCTGCTTTG
TGCATTGTTAAAGTAGCTCTGTTCCATTGCTGCTATCCAAACCGCAGCGG
TTCTATAGACGTGTGTTGTGTGTTTTGGTCGTGCCAATCGACCTACCTGC
GCAATTTGATTTGCCCGGCAAGCCTGGCAACCGCAATGCCACGAAGCAGC
TGGTATCGATGGCCTTGGCAAGTAAGGCTGTCCATGCCAACCATGGTGCG
TCACATATATGCCTAGGAGAGCAGAGATGTTTGGTGTCAATGCGGGTATC
CAGCAGTAAGCGCGGGCACGAAAAAACACCACAACCATGTCACCCGATTC
CCGAGGGGACACCAATTTCAACTTGTATTGATTGGGCAATGGTGTAGTTG
TCGGGAAATGCCGAGCGGCGCAAGCCACGCCATACATCTGAAACGACATT
TTTGCTTCATCGACAGGTGATACATGTATGGCGGTGTAGTCCCGTTGGAA
GCGGGCAATCTTTTGCTCTCATTTTCCTCTAGTTGACTTTGATCCCGCAT
TATATGGACAGGGACGTGGAGGCAATCGAGTGTGTTCAAAACACACCTCC
GAATGCCGACAAAATCCACGAGAAGCACTGCTATTCCACAGCCACAATAT
GCAACAACAATTAACTACATGGATGATTCTGCTTTGTAAGTCAAGCACAA
CATCCACATGTTTTTTTTGTTTGTAGGTTTTTGTTGGAGCGCTATTCGCG
ATGACGAGTCATGTATCTTGTGTCTGTCGGAGTTTACAAACCGATGACGA
TACACATCATGCTGCCTTCCTGCTGAGCGAATGCCCCGATGAAACACAGG
CGATGTATCACGGTTGATCTCCTTAACCACATGCCTTTGCCATGCGCACG
CATGCACCTCTTGACCTTGACATTTGCGAGCAAGTCCCCCCAAAGATGAA
CCACCAGTGTAGACTGTGTACTCCTACCTGGTATGGACTGTTTCGACAGC
CTGAACGTGAAGGCACTACACTGCACTGCAGAATTGTCCGCCTCACTATC
ATTTCTCTTAATCGCCACCTTGAATTCTGCCAATCCTTGAACGAATGTGT
CACCCAAACGAACAGGTGCGGGCAAGCACGTGCCCCGCGCCGTGTACGTG
GACCTGGAGCCCACCGTGTGCGACGAAGTCCGCACCGGCACCTACCGCCA
GCTGTACCACCCGGAGCAGATCATCTCGGGCAAGGAGGACGCGGCCAACA
ACTACGCTCGCGGCCACTACACGATCGGCAAGGAGATCGTGGACCTGGTG
CTCGACCGCATCCGCAAGCTGGCGGACAACTGTACCGGCCTCCAGGGCTT
CCTGGTGTTCCACGCCACTGGCGGCGGGACGGGGTCCGGGCTCGGCTCGC
TCTTGCTGGAGCGTCTGTCGGTGGACTACGGCCGCAAGTCCAAGCTTTCC
TTCGCCATCACCCCGGCGCCGCAGGTTGCGACGGCGGTGGTG

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17044:189..2330-

>mRNA_Ecto-sp13_S_contig17044.5014.1 ID=mRNA_Ecto-sp13_S_contig17044.5014.1|Name=mRNA_Ecto-sp13_S_contig17044.5014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17044:189..2330- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGTGAGTGCATCTCCATCCACATTGGCCAGGCCGGCATCCAGACCGG
TAACGCTTGCTGGGAGCTCTACTGCCTGGAGCACGGCATCCAGCCCGATG
GGCAGATGCCCTCGGACAAGACCATCGGCGGCGGTGATGACGCCTTCAAC
ACCTTTTTCTCGGAGACTGGTGCGGGCAAGCACGTGCCCCGCGCCGTGTA
CGTGGACCTGGAGCCCACCGTGTGCGACGAAGTCCGCACCGGCACCTACC
GCCAGCTGTACCACCCGGAGCAGATCATCTCGGGCAAGGAGGACGCGGCC
AACAACTACGCTCGCGGCCACTACACGATCGGCAAGGAGATCGTGGACCT
GGTGCTCGACCGCATCCGCAAGCTGGCGGACAACTGTACCGGCCTCCAGG
GCTTCCTGGTGTTCCACGCCACTGGCGGCGGGACGGGGTCCGGGCTCGGC
TCGCTCTTGCTGGAGCGTCTGTCGGTGGACTACGGCCGCAAGTCCAAGCT
TTCCTTCGCCATCACCCCGGCGCCGCAGGTTGCGACGGCGGTGGTG