prot_Ecto-sp13_S_contig17044.5014.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig17044.5014.1
Unique Name	prot_Ecto-sp13_S_contig17044.5014.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	182

Homology

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: TBA2_PELFA (Tubulin alpha-2 chain n=45 Tax=cellular organisms TaxID=131567 RepID=TBA2_PELFA)

HSP 1 Score: 374 bits (961), Expect = 1.940e-127
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV
Sbjct:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: F0YR93_AURAN (Tubulin alpha chain n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YR93_AURAN)

HSP 1 Score: 358 bits (918), Expect = 1.810e-122
Identity = 171/182 (93.96%), Postives = 176/182 (96.70%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRECI IHIGQ GIQ GNACWEL+CLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFL FHATGGGTGSGLGSL+LERLSVDYGRKSKLSF I+PAPQ++ AVV
Sbjct:    1 MRECICIHIGQGGIQGGNACWELFCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLAFHATGGGTGSGLGSLILERLSVDYGRKSKLSFCISPAPQISNAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A7S3ASU3_9EUKA (Tubulin alpha chain (Fragment) n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ASU3_9EUKA)

HSP 1 Score: 347 bits (891), Expect = 1.420e-120
Identity = 167/182 (91.76%), Postives = 176/182 (96.70%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRE ISIH+GQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETG+GKHVPR V+VDLEPTV DEVRTGTYRQLYHPEQ+ISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGF+VF+A GGGTGSGLG+LLLERLSVDYGRKSKLSF I P+PQV+TAVV
Sbjct:   10 MREVISIHLGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGSGKHVPRCVFVDLEPTVVDEVRTGTYRQLYHPEQLISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFVVFNAVGGGTGSGLGALLLERLSVDYGRKSKLSFTIYPSPQVSTAVV 191

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: T0QZD2_SAPDV (Tubulin alpha chain n=9 Tax=Eukaryota TaxID=2759 RepID=T0QZD2_SAPDV)

HSP 1 Score: 350 bits (897), Expect = 1.020e-119
Identity = 169/182 (92.86%), Postives = 175/182 (96.15%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRE ISIH+GQ GIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAV VDLEP+VCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVF+A GGGTGSGLG+LLLERLSVDYGRKSKL F I P+PQV+TAVV
Sbjct:    1 MREVISIHLGQGGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVLVDLEPSVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGALLLERLSVDYGRKSKLGFTIYPSPQVSTAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: Q1PGA4_STRAF (Tubulin alpha chain (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=Q1PGA4_STRAF)

HSP 1 Score: 345 bits (886), Expect = 1.130e-119
Identity = 165/182 (90.66%), Postives = 173/182 (95.05%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSD T+GGGDDAFNTFFSETGAGKHVPRAV+VDLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFHA GGGTGSGLGSLLLERLSVDYG+KSKL F I P+P V+TAVV
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDTTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPHVSTAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A835U631_VANPL (Tubulin alpha chain n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A835U631_VANPL)

HSP 1 Score: 345 bits (886), Expect = 2.920e-119
Identity = 164/182 (90.11%), Postives = 175/182 (96.15%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPRAV+VDLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF+A GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+T+VV
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A1W0A2F4_9STRA (Tubulin alpha chain (Fragment) n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1W0A2F4_9STRA)

HSP 1 Score: 344 bits (882), Expect = 4.290e-119
Identity = 163/182 (89.56%), Postives = 174/182 (95.60%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRE +SIH+GQ GIQ GNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTFFSETGAGKHVPRAV+VDLEP+VCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVD VLDR+RKLAD+CTGLQGF+VF+A GGGTGSGLGSLLLERLSVDYGRKSKL F I P+PQV+TAVV
Sbjct:    1 MREILSIHLGQGGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPSVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDQVLDRVRKLADSCTGLQGFMVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQVSTAVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A8K0H3D6_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0H3D6_9ROSA)

HSP 1 Score: 345 bits (886), Expect = 5.480e-119
Identity = 163/182 (89.56%), Postives = 174/182 (95.60%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMP DKT+GGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVFHA GGGTGSGLGSLLLERLSVDYG+KSKL F + P+PQV+T+VV
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: UPI00200EFFA3 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00200EFFA3)

HSP 1 Score: 343 bits (880), Expect = 1.030e-118
Identity = 162/182 (89.01%), Postives = 175/182 (96.15%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRECISIHIGQAGIQ GNACWELYCLEHGIQPDGQMP DKT+GGGDDAFNTFFSETGAGKHVPRAV++DLEPTV DEVRTGTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEIVDL LDRIRKLADNCTGLQGFLVF++ GGGTGSGLGSLLLERLSVDYG+KSKLSF + P+PQV+T+VV
Sbjct:    1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLSFTVYPSPQVSTSVV 182

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BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Match: A0A1Y2C0Z2_9FUNG (Tubulin alpha chain n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0Z2_9FUNG)

HSP 1 Score: 344 bits (883), Expect = 1.110e-118
Identity = 160/182 (87.91%), Postives = 175/182 (96.15%), Query Frame = 0

Query:    1 MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVV 182
            MRECISIH+GQAG+Q GNACWELYCLEHGIQPDGQMPSDKTIGGGDD+FNTFFSETGAGKHVPR V+VDLEPTV DEVRTGTYRQL+HPEQ+I+GKEDAANNYARGHYT+GKEI+DLVLDRIRKLADNCTGLQGFLVFH+ GGGTGSG G+LLLERLSVDYG+KSKL F++ PAPQV+TAVV
Sbjct:    1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRTVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADNCTGLQGFLVFHSFGGGTGSGFGALLLERLSVDYGKKSKLEFSVYPAPQVSTAVV 182

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig17044.5014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
TBA2_PELFA	1.940e-127	100.00	Tubulin alpha-2 chain n=45 Tax=cellular organisms ...	[more]
F0YR93_AURAN	1.810e-122	93.96	Tubulin alpha chain n=1 Tax=Aureococcus anophageff...	[more]
A0A7S3ASU3_9EUKA	1.420e-120	91.76	Tubulin alpha chain (Fragment) n=2 Tax=Haptolina e...	[more]
T0QZD2_SAPDV	1.020e-119	92.86	Tubulin alpha chain n=9 Tax=Eukaryota TaxID=2759 R...	[more]
Q1PGA4_STRAF	1.130e-119	90.66	Tubulin alpha chain (Fragment) n=4 Tax=Eukaryota T...	[more]
A0A835U631_VANPL	2.920e-119	90.11	Tubulin alpha chain n=2 Tax=Mesangiospermae TaxID=...	[more]
A0A1W0A2F4_9STRA	4.290e-119	89.56	Tubulin alpha chain (Fragment) n=2 Tax=Saprolegnia...	[more]
A0A8K0H3D6_9ROSA	5.480e-119	89.56	Uncharacterized protein n=1 Tax=Rhamnella rubriner...	[more]
UPI00200EFFA3	1.030e-118	89.01	hypothetical protein n=1 Tax=Escherichia coli TaxI...	[more]
A0A1Y2C0Z2_9FUNG	1.110e-118	87.91	Tubulin alpha chain n=1 Tax=Rhizoclosmatium globos...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 53..72 score: 67.01 coord: 95..106 score: 65.77 coord: 108..132 score: 62.39 coord: 134..152 score: 69.8 coord: 153..174 score: 40.31 coord: 10..30 score: 65.6
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..182
IPR002452	Alpha tubulin	PRINTS	PR01162	ALPHATUBULIN	coord: 18..33 score: 95.27 coord: 88..101 score: 88.06 coord: 148..160 score: 86.23 coord: 45..58 score: 85.23 coord: 120..128 score: 86.55 coord: 161..172 score: 63.1
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 49..181 e-value: 5.2E-19 score: 79.2
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..176 e-value: 7.1E-52 score: 176.5
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440		coord: 1..182 e-value: 3.4E-83 score: 281.1
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 1..182
None	No IPR available	PANTHER	PTHR11588:SF324		coord: 1..182
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 142..148

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig17044	contig	Ecto-sp13_S_contig17044:189..2321 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig17044.5014.1	mRNA_Ecto-sp13_S_contig17044.5014.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig17044 189..2330 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig17044.5014.1 ID=prot_Ecto-sp13_S_contig17044.5014.1|Name=mRNA_Ecto-sp13_S_contig17044.5014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
MRECISIHIGQAGIQTGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFN
TFFSETGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAA
NNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG
SLLLERLSVDYGRKSKLSFAITPAPQVATAVV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000217	Tubulin
IPR002452	Alpha_tubulin
IPR003008	Tubulin_FtsZ_GTPase
IPR036525	Tubulin/FtsZ_GTPase_sf
IPR017975	Tubulin_CS