mRNA_Ecto-sp13_S_contig17020.5006.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17020.5006.1
Unique NamemRNA_Ecto-sp13_S_contig17020.5006.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 624 bits (1608), Expect = 1.930e-215
Identity = 321/360 (89.17%), Postives = 333/360 (92.50%), Query Frame = 3
Query:  258 GFCPLSYGEKRWVRESLNQIAAKGFPLDRLHKEAVAKMVVEYYAATTAHFKAEIAAEVGGVPRLHLDLDLWVDKFSTLMFIGVRLFYIDRELQLKSRLLAVR*FKLTPEMFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIPRLWKSYVCHMLNCSLVEVHCRPSTRMDSRKPGNPVARQVVLAVKKVAEHIRRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVDIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTQVPTGQAAVLGLAALKLSTFNVDAQLDVLSPARAQGRPEGAGGGERKTTSVPRLNNHL 1337
            GFCPLSYGEKRWVRESLNQIAAKGFPL RLHKEAVAKMVVEYYAATTA F+AEI AEVGGVPRLHLDLDLWVDK STLMF+GVRLFYIDRE +LKSRLLAVR F  T EMFENERLSA+LEKYLTDVL EFGLDVSMLFSATSDAGSDVKHRLC+ LIPRLWKS VCHMLNCSLVE      TR+DSRKPGNP AR+VVLAVKKV EHIRRSKSPGA+AIFQEEQVRH+SQCLHRKLVNVAPQRWSGVSGVLEATIVNRV IDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQT VPTGQAAVLGLA LKLSTFNVDA+LDVL+P RAQG PEG GGGERK TSVPRL+NHL
Sbjct:   11 GFCPLSYGEKRWVRESLNQIAAKGFPLGRLHKEAVAKMVVEYYAATTAQFQAEITAEVGGVPRLHLDLDLWVDKSSTLMFMGVRLFYIDREWRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHTLIPRLWKSCVCHMLNCSLVEAI---GTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVRAQGWPEGTGGGERKATSVPRLHNHL 367          
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 4.910e-126
Identity = 214/357 (59.94%), Postives = 255/357 (71.43%), Query Frame = 3
Query:  258 GFCPLSYGEKRWVRESLNQIAAKGFPLDRLHKEAVAKMVVEYYAATTAHFKAEIAAEVGGVPRLHLDLDLWVDKFSTLMFIGVRLFYIDRELQLKSRLLAVR*FKLTPEMFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIPRLWKSYVCHMLNCSLVEVHCRPSTRMDSRKPGNPVARQVVLAVKKVAEHIRRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVDIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTQVPTGQAAVLGLAALKLSTFNVDAQLDVLSPAR--AQGRPEGAGGGERKTTSVPR 1322
            GFCPLS+GEK WVR SL   A K FP+  +H +AV +M+                   GG+  LH +LDLWVDKFS+L +IG+RLFY DR   L+SRL+AVR F  T E+ E+ RLSALL+KYL  VL E+GLDVS+LFSATSDAGSDVK RLC++L+P LW+  VCHM+NC+LVE      T +D  K GNP AR+V+  VKKV EHIR  KSP A+AIF+EEQV+ ++QC HRKLVN APQRWSGV+ VLEA IVNR  IDGVY  EG  +PL     EIDELYS+IKP A++IV CQQT VPTGQ AVL LAALKL T NVD+ L++L+PAR  AQ    G GGGER  TS PR
Sbjct:  120 GFCPLSHGEKEWVRASLKLTALKNFPITGIHNKAVKQMI-------------------GGMRLLHHNLDLWVDKFSSLKYIGIRLFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVK-RLCDVLLPGLWEWCVCHMINCALVEAF---GTHVDPAKSGNPGARKVITTVKKVVEHIR--KSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDGVYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPR 451          
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 1.130e-118
Identity = 210/349 (60.17%), Postives = 255/349 (73.07%), Query Frame = 3
Query:  267 PLSYGEKRWVRESLNQIAAKGFPLDRLHKEAVAKMVVEYYAATTAHFKAEIAAEVGGVPRLHLDLDLWVDKFSTLMFIGVRLFYIDRELQLKSRLLAVR*FKLTPEMFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIPRLWKSYVCHMLNCSLVEVHCRPSTRMDSRKPGNPVARQVVLAVKKVAEHIRRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVDIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTQVPTGQAAVLGLAALKLSTFNVDAQLDVLSPAR--AQGRPEGAGGGERKT 1307
            PL+ GE   V+ S+  ++A+ F   R+ K+ V +MVVE YAAT A FK E+A EV GVP LHL L+LWVDK S+L ++GVR FY++   QLKS LLAVR F  TPE  +NERLS LLEKY+  VL EFG+D S+LFSATSDAG DVK RLC++L+P L +  VCHML+ SL E      T +  ++PG   AR VV+AVKK  E +R  KSP ++ IF EEQV  FSQC +RK+VN APQRWSGV+G LEAT+ NR  I+GVYA EG  +PL+PH +EIDELYSLI+PVAE+I TCQQT  PTGQAAVLGLAALKLST N DA LD+L+PA    QG  EGAGG +R T
Sbjct:  126 PLTLGETEGVKTSV-LLSARSFAPSRIRKQEVKRMVVECYAATAAQFKEEMATEVAGVPCLHLSLELWVDKSSSLKYMGVRFFYVNSVWQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVK-RLCSVLLPGLREWCVCHMLSDSLAEA---VGTCVGPQQPGGRAARNVVMAVKKAVERVR--KSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGGEQRTT 467          
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 8.430e-105
Identity = 170/285 (59.65%), Postives = 214/285 (75.09%), Query Frame = 3
Query:  258 GFCPLSYGEKRWVRESLNQIAAKGFPLDRLHKEAVAKMVVEYYAATTAHFKAEIAAEVGGVPRLHLDLDLWVDKFSTLMFIGVRLFYIDRELQLKSRLLAVR*FKLTPEMFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIPRLWKSYVCHMLNCSLVEVHCRPSTRMDSRKPGNPVARQVVLAVKKVAEHIRRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVDIDGVYAREGSVNPLAPHENEIDEL 1112
            GFCP+S+GEK WVR SL   A K FP+  +H EAV +MVVE YAAT + FK E+AA++GG+  LHL LDLWVDKFS+L ++G+ LFY+DR   L+SRL+AVR F  T E+ E+ RLSAL++K+L  VL E+GLDVS++FSATSD+GSDVK RLC++L+P LW+  VCHM+NC+LVE      T +DS K  NP AR+V+   KKV EHI   KSP A+AIF++EQVR ++QC HRKLVN APQRWSGV+ VLEA IVNR  ++ VY  EG  +PL    NEIDEL
Sbjct:  175 GFCPVSHGEKEWVRASLKLTALKNFPITGIHNEAVKQMVVEMYAATASQFKMEMAAQIGGMRLLHLSLDLWVDKFSSLKYVGIPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVK-RLCDVLLPGLWEWCVCHMINCALVEAF---GTHVDSAKSRNPGARKVITMGKKVVEHI--PKSPRAKAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 453          
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 8.650e-98
Identity = 166/286 (58.04%), Postives = 207/286 (72.38%), Query Frame = 3
Query:  258 GFCPLSYGEKRWVRESLNQIAAKGFPLDRLHKEAVAKMVVEYYAATTAHFKAEIAAEVGGVPRLHLDLDLWVDKFSTLMFIGVRLFYIDRELQLKSRLLAVR*FKLTPEMFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIPRLWKSYVCHMLNCSLVEVHCRPSTRMDSRKPGNPVARQVVLAVKK-VAEHIRRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVDIDGVYAREGSVNPLAPHENEIDEL 1112
            GFCPLS+GEK WVR SL   A K FP+  +H +AV +MVVE YAAT + FK E+AA++GG+  LHL+LDLWVDKFS+L +IG+RLFY+DR   L+SRL+AVR F  T E+ E+ RLSALL+KYL  VL E+GLDVS+LFSATSDAGSDVK RLC++L+P LW+  VCHM+NC+LVE      T ++  K  NP   Q     +K    H + S+S    AIF++EQVR ++QC HRKLVN APQRWSGV+ VLEA IVNR  ++ VY  EG  +PL    NEIDEL
Sbjct:   22 GFCPLSHGEKEWVRASLQLTALKNFPITGIHNKAVKQMVVEMYAATASQFKMEMAAQIGGMRLLHLNLDLWVDKFSSLKYIGIRLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVK-RLCDVLLPGLWEWCVCHMINCALVEAF---GTHVNPAKSINPRCTQSDHDGEKGCGVHPQISQSEVG-AIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 302          
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 6.560e-92
Identity = 153/173 (88.44%), Postives = 163/173 (94.22%), Query Frame = 3
Query:  804 TRMDSRKPGNPVARQVVLAVKKVAEHIRRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVDIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTQVPTGQAAVLGLAALKLSTFNVDAQLDVLSPARAQGRPEGAGGGERKTTSVPR 1322
            TR+DSRKPGN  AR++VLAVKKV EHIR+SKSPGAQAIFQEEQVRH+SQCLHRKLVNVAPQRWSGV GVLEATIVNRVDIDGVYAREGSVNPLAPHE++IDELYS+IKPVAELIVT QQT VPTGQAA LGLAALKLSTFNVDA+LDVL+PARAQGRPEGAGG E K TSVPR
Sbjct:   16 TRVDSRKPGNRAARKMVLAVKKVVEHIRKSKSPGAQAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPARAQGRPEGAGGVEPKATSVPR 188          
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 2.690e-85
Identity = 171/349 (49.00%), Postives = 210/349 (60.17%), Query Frame = 3
Query:  258 GFCPLSYGEKRWVRESLNQIAAKGFPLDRLHKEAVAKMVVEYYAATTAHFKAEIAAEVGGVPRLHLDLDLWVDKFSTLMFIGVRLFYIDRELQLKSRLLAVR*FKLTPEMFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIPRLWKSYVCHMLNCSLVEVHCRPSTRMDSRKPGNPVARQVVLAVKKVAEHIRRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVDIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTQVPTGQAAVLGLAALKLSTFNVDAQLDVLSPAR--AQGRPEGAGGGE 1298
            GFCPLS+G K WVR SL         L  L+ +AV ++VV+ YAAT + +K E+AA++GG+  LHL+ DLWVDKFS+L  IG+RLFYIDR   L+SRL+AVR F  T E+ E+ RL ALL+KYL  VL E+GLDVS+LFSATSDAGSD                                  T +D  K  +PV R+V+  VK V EHIR  KSP A+  F                   A     GV+ VLEA IVNR  IDGVY  EG  +PL    +EIDEL+S+IKP A++IV CQQT VPT Q AVL LAALKL+T NVD+ L++L+PAR  AQ    G GG E
Sbjct:   11 GFCPLSHGGKEWVRASLK--------LTALNNKAVKQVVVDMYAATASQYKMEMAAQIGGMRLLHLNRDLWVDKFSSLKCIGIRLFYIDRTWVLRSRLIAVRQFNPTKELLEDNRLLALLQKYLESVLEEYGLDVSLLFSATSDAGSDAF-------------------------------GTHVDPAKSRSPVVRKVIATVKMVMEHIR--KSPRAKVSF-------------------AVVIGCGVTNVLEAVIVNRAAIDGVYTTEGKDSPLTSLTDEIDELFSIIKPAAQVIVKCQQTSVPTVQLAVLALAALKLTTLNVDSPLEILTPARKLAQAGTSGIGGRE 299          
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: A0A6H5KHW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW5_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 3.410e-85
Identity = 143/161 (88.82%), Postives = 148/161 (91.93%), Query Frame = 3
Query:  258 GFCPLSYGEKRWVRESLNQIAAKGFPLDRLHKEAVAKMVVEYYAATTAHFKAEIAAEVGGVPRLHLDLDLWVDKFSTLMFIGVRLFYIDRELQLKSRLLAVR*FKLTPEMFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIPRL 740
            G CPLSYGEKR VRESLNQIAAKGFPLDRLHKE VAKMVVEYYAATTA FKAEIAAEVGGVPRLHLDL+LWVDK STLMF+GVRLFYIDRE +L+SRLLAVR F  TPEMFENERLS LLEK+LTDVL EFGLDV MLFSATSDAGSDVKHRLC ILIPRL
Sbjct:   24 GCCPLSYGEKRRVRESLNQIAAKGFPLDRLHKETVAKMVVEYYAATTAQFKAEIAAEVGGVPRLHLDLELWVDKSSTLMFMGVRLFYIDREWRLRSRLLAVRQFNPTPEMFENERLSKLLEKHLTDVL-EFGLDVYMLFSATSDAGSDVKHRLCYILIPRL 183          
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 6.620e-72
Identity = 134/236 (56.78%), Postives = 173/236 (73.31%), Query Frame = 3
Query:  501 GVRLFYIDRELQLKSRLLAVR*FKLTPEMFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIPRLWKSYVCHMLNCSLVEVHCRPSTRMDSRKPGNPVARQVVLAVKKVAEHIRRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVDIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQ--TQVPTGQAAVLGLA 1202
            G+RL+Y+DR   L+SRL+AVR F  T E+ E+ RLS LL+KYL  VL E+GLDVS+LFSATSDAGSDVK RLC++L+P LW+  VCHM+NC++V+        +D  K  NP AR+V+  VK + EHIR  KSP A+AIF+EEQVR ++QC HRKLVN APQRWSGV+ VLEA IVNR  IDGVYA EG  +PL    +EIDEL+ +IKP A++IV+ ++  T  P   + + G+A
Sbjct:    3 GIRLYYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVK-RLCDVLLPGLWEWCVCHMMNCAVVKAF---GMHVDPAKSRNPGARKVITTVKTIVEHIR--KSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRPAIDGVYAAEGKHSPLTSLTDEIDELHYIIKPAAQVIVSGERPATSTPREHSLLTGVA 232          
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 4.140e-26
Identity = 97/308 (31.49%), Postives = 155/308 (50.32%), Query Frame = 3
Query:  360 VAKMVVEYYAATTAHFKAEIAAEV--GGVPRLHLDLDLWVDKFSTLMFIGVRLFYIDRELQLKSRLLAVR*FKLTPEMFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIPR---LWKSYVCHMLNCSLVEVHCRPSTRMDSRKPGNPVARQVVLAVKKVAEHIRRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVDIDGVYAREGSVNPLAPHENE--IDELYSLIKPVAELIVTCQQTQVPTGQAAVLGLAALKLSTFNVDAQLDVLSPAR 1262
            V  ++ E Y AT       +  EV    +P LH ++D+W DK S   F+G+ +FY+D   +LK  LL+++ +        ++R S +L + +  VL EFGL  S L S T+D+GSDVK    N L P    LW    CH++  +  + +      +D  K  NP AR ++  V KV E++  +KSP  +A F++ QV    +    K+V  APQRW  ++  +E TI     +  +Y+ EG   PL   + +  I +LYSL++P++ +    Q      G A ++    +K    N D    VL P++
Sbjct:  226 VKHLITELYVATKKVVVGNMVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAY---GIHLDPAKSKNPQARDILKKVVKVVENL--NKSPNFKAKFEDLQVDMLGEIF--KMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQY-----GDAPMMADIFMKFGMLNTD----VLDPSK 517          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17020.5006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LBK4_ECTSI1.930e-21589.17Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE4.910e-12659.94Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LFP4_ECTSI1.130e-11860.17Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KWS6_9PHAE8.430e-10559.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEC8_9PHAE8.650e-9858.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEK6_9PHAE6.560e-9288.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM59_9PHAE2.690e-8549.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHW5_9PHAE3.410e-8588.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNY1_9PHAE6.620e-7256.78Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JJJ9_9PHAE4.140e-2631.49Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17020contigEcto-sp13_S_contig17020:485..3779 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score66.2
Seed ortholog evalue2.5e-08
Seed eggNOG ortholog2880.D7G4Z8
Model size1795
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs2CZK4@1,2SARG@2759
Ec32 ortholog descriptionRibonuclease H-like domain
Ec32 orthologEc-27_003620.1
Cds size786
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17020.5006.1prot_Ecto-sp13_S_contig17020.5006.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17020 1283..3354 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462892.3102374-UTR-Ecto-sp13_S_contig17020:484..9851681462892.3102374-UTR-Ecto-sp13_S_contig17020:484..985Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17020 485..985 +
1681462892.3197656-UTR-Ecto-sp13_S_contig17020:1199..12821681462892.3197656-UTR-Ecto-sp13_S_contig17020:1199..1282Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17020 1200..1282 +
1681462892.3540485-UTR-Ecto-sp13_S_contig17020:3354..37791681462892.3540485-UTR-Ecto-sp13_S_contig17020:3354..3779Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig17020 3355..3779 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462892.3277845-CDS-Ecto-sp13_S_contig17020:1282..14871681462892.3277845-CDS-Ecto-sp13_S_contig17020:1282..1487Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17020 1283..1487 +
1681462892.337962-CDS-Ecto-sp13_S_contig17020:2532..26541681462892.337962-CDS-Ecto-sp13_S_contig17020:2532..2654Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17020 2533..2654 +
1681462892.3460035-CDS-Ecto-sp13_S_contig17020:2895..33541681462892.3460035-CDS-Ecto-sp13_S_contig17020:2895..3354Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17020 2896..3354 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17020.5006.1

>prot_Ecto-sp13_S_contig17020.5006.1 ID=prot_Ecto-sp13_S_contig17020.5006.1|Name=mRNA_Ecto-sp13_S_contig17020.5006.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=262bp
MFENERLSALLEKYLTDVLGEFGLDVSMLFSATSDAGSDVKHRLCNILIP
RLWKSYVCHMLNCSLVEVHCRPSTRMDSRKPGNPVARQVVLAVKKVAEHI
RRSKSPGAQAIFQEEQVRHFSQCLHRKLVNVAPQRWSGVSGVLEATIVNR
VDIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTQVPTGQA
AVLGLAALKLSTFNVDAQLDVLSPARAQGRPEGAGGGERKTTSVPRLNNH
LLRKVATLANT*
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mRNA from alignment at Ecto-sp13_S_contig17020:485..3779+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17020.5006.1 ID=mRNA_Ecto-sp13_S_contig17020.5006.1|Name=mRNA_Ecto-sp13_S_contig17020.5006.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3295bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17020:485..3779+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAAGACATACATGCGGACGGTGTAGATTTAGTTGCTTGTTTTACTCAAGC GTCATTGATAGTGTCGGTTTATGTCTCGACAGGCAACAAAAAACAAAAAC AATAACACCAAGTGTTGCGAAAATATTTCTGCTGGTTTCAGAATCCAATT CAATGCCTAAAAAGAAGGACGGTTCACAGAAGCCTCTACGAAACTGTAGC CGCACAGGCGAAGGCAGACGCTCTGGAAGACAGTGCGGCGATGAACTGGG TCAGATCGGTTTCTGTCCTCTGTCGTACGGCGAGAAGCGCTGGGTGCGAG AGAGCTTGAACCAGATTGCTGCGAAGGGTTTCCCGCTGGACCGCCTCCAC AAGGAGGCTGTAGCGAAGATGGTCGTCGAGTACTACGCCGCGACCACTGC GCACTTCAAGGCGGAGATAGCCGCCGAGGTTGGAGGCGTGCCGCGTCTGC ATCTCGACCTGGACCTGTGGGTTGACAAGTTCTCGACCTTGATGTTCATC GGTAAGCAGAAGTGGGCGACAATAACCTGCTGCAGGTTAGCGTGCGCTCC GACAGCTTAGATGGCGACGCCCCCCCCCCACCCTCTTGCTGTTTCAAAGT GTTACAAAGTGCGACGTACGTGTAAATTTGGAATAAACAATGATTTACGT CTCCGATCAACACCATTCATCCGTTGCTTTCTTCACGCATCGCCTCCCGA CATCCTTGAGTTCAGGTGTTCGGTTGTTCTACATCGACCGGGAGTTGCAG CTGAAGTCCCGCCTCCTAGCTGTTCGATAGTTCAAGCTGACACCGGAGAT GTTCGAGAACGAGCGCCTCTCTGCGCTCCTTGAGAAGTACCTTACCGATG TGCTTGGGGAGTTCGGCCTCGACGTATCCATGCTCTTCTCAGCAACAAGC GACGCCGGCAGCGATGTGAAACACCGCCTTTGTAACATATTGATCCCGAG GCTATGGAAGTCATATGTGTGCCATATGCTCAACTGCTCTCTGGTCGAGG TGCGTTTTCAGGTTTGAGGGAGGCAACAGCTCTCTGCATAGTGTAGGAAA TCTTCATTCCTCAGACCGCTGTATATGAGCGATGTTAGTTGCATGCTTTC CAGTGCAACCAACATCCCATGCATGGCAAAACTGCTGCGTGTCACGGGAA GATTACTTGTACCTTGTTGTTTTTCCCCTTTGGTTGTACACCCCCCCCCT TCCACCACAAAGAATGGCCGAGGATGTGGGAATACCTTTCATTTGACCCC AGGGCAAACTTATCTTGAGAAAGAAAGAACTTTCCCCTCCTGGTGGAGCG AAGCCCCGCGAGTCTTCCGATTTTTTCTACGCGCTGCATGCTTACACGCT ACATGATATATCTTCGCTGTTTATACTGGTGGGTGCAGCTTGTCGGTGTA AACAGAGCAGTGTTTTCGCCCCCCCCCAAGAGGGCCATAATGGTGGTCGA GTAGGTTATATTGTGCGGGGTTGAGAACGCTCACTCCCCGCAAAGGGGAT GATCGCACCACGTTGTGTTAAAATAGCCAAGCACAAAAGGCAGTTACACA GCAGTCCTTGTAACCGTCTCAGAAAGTAGACGCACCAGAAAAAGATTCAA GTCTTTTGCAGCTCATCCGTGGTAAGGAAGGAGCACAAGATGCCGAACAC CCTTAACAGGATGCAGCACACCCTTCATGCGACTCGCCGAATACCTCACG GCGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGT GCGCCGTCCCGACTTTGTAGGGATGCGCGGTCAATGGTCTAACGACCACG GCATGCGCGACTATGATTACCCCCGCCCCCCCTCCGCCCCCCTTCCAAGA GGACTTTTCCCGTCACGGCACCTAATTTCATCACGACGTACCTCCCCCCC CCCCGTGCTAGAGGCAGGGCCTTGGGCGTGCTAAGACATCGCGTTATGTT GACGAACCGCTCCCCCTGCTATCTCAAGAAGCAGATTATGGCACGACCTG CGCTTGATATTTCTTGCTCTCGTCAACGGTTCGCGTTTACACCGTCAGAC TGCAGGCCATCGACTCGCATGGACTCGCGAAAGCCAGGGAATCCCGTCGC GCGCCAAGTGGTGTTGGCGGTGAAGAAAGTCGCCGAGCACATTCGCAGGT CCAAGTCTCCAGGAGCACAGGTGAGTGTAACTGTTTGGGTTGTTTTCCTG TCTGTGCGCTGTGCGCCTTCTGTGTGTCTTGGCGTCATAAAGCAACAACG TACACCAGAGCGCCTACCATCTCCAATGAGCCCCCTTTCCTCCACATCTT TTGGCTACGCATTTGCCATGGGTTTTATTCTTCATGTGCGTTATACACCC TTCTGCATTCTTATATTTCTGGTAGACTAACCTCCCGCAGCCCCCCCCCA ACCCGAAACAGGCAATCTTTCAGGAAGAACAAGTTCGGCACTTTTCGCAA TGCTTGCACCGTAAGCTGGTCAACGTGGCACCGCAGCGGTGGTCTGGTGT GAGCGGCGTCCTCGAGGCGACCATCGTCAACCGTGTCGACATCGACGGGG TGTACGCCAGGGAAGGGAGCGTCAACCCTCTGGCGCCGCACGAGAACGAG ATCGACGAGCTGTACTCCCTCATCAAGCCTGTGGCGGAACTCATCGTCAC GTGCCAGCAAACCCAAGTCCCCACAGGACAAGCTGCGGTGCTTGGCCTAG CGGCACTCAAGCTCAGCACCTTCAACGTCGACGCCCAGCTCGACGTCTTG TCGCCGGCGCGGGCACAGGGTAGGCCGGAGGGCGCCGGTGGCGGGGAACG GAAGACCACCAGCGTCCCCAGGTTGAACAACCACCTACTCAGGAAGGTCG CGACGCTCGCGAACACCTAGCGTCCGCCCTTGACCGTAGGTACTTCGACA GGTGCTGCAAGCCCGCCGATTGCGAGAAGACGACGGACTTCGTGTTCGAC ATGTAGATGGGCCTACACCCGACTACGGCTGACCTCCAATACATGGATAT GCTCGCCTCAACGAAAGTGCACGCTGCGTTTGTCGAGAAGAGAATCACCG ACAAGATCATCGCCTTGGCTGTGGAGCTGGCGGAGAAGGAGATAGAGCGC AAGCAGGCGGGCTCGGAGCAAGACGAGTCACTCGCAAAGCGGGCGCGCCC AGCGGCCACTCGCGGAAGCTTGGACCCGGCAGTCGCCAAGGCAAGAAACA AGAACGAGGACGCGACTACGGCGAAGTTCGCCAGCCTCGGACTTTTCAAG AAACGCGGGGTGGGGGCGAACGCGCCGCAGCAGCCAACGTTCGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17020:485..3779+

>mRNA_Ecto-sp13_S_contig17020.5006.1 ID=mRNA_Ecto-sp13_S_contig17020.5006.1|Name=mRNA_Ecto-sp13_S_contig17020.5006.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=786bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17020:485..3779+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTCGAGAACGAGCGCCTCTCTGCGCTCCTTGAGAAGTACCTTACCGA
TGTGCTTGGGGAGTTCGGCCTCGACGTATCCATGCTCTTCTCAGCAACAA
GCGACGCCGGCAGCGATGTGAAACACCGCCTTTGTAACATATTGATCCCG
AGGCTATGGAAGTCATATGTGTGCCATATGCTCAACTGCTCTCTGGTCGA
GGTGCACTGCAGGCCATCGACTCGCATGGACTCGCGAAAGCCAGGGAATC
CCGTCGCGCGCCAAGTGGTGTTGGCGGTGAAGAAAGTCGCCGAGCACATT
CGCAGGTCCAAGTCTCCAGGAGCACAGGCAATCTTTCAGGAAGAACAAGT
TCGGCACTTTTCGCAATGCTTGCACCGTAAGCTGGTCAACGTGGCACCGC
AGCGGTGGTCTGGTGTGAGCGGCGTCCTCGAGGCGACCATCGTCAACCGT
GTCGACATCGACGGGGTGTACGCCAGGGAAGGGAGCGTCAACCCTCTGGC
GCCGCACGAGAACGAGATCGACGAGCTGTACTCCCTCATCAAGCCTGTGG
CGGAACTCATCGTCACGTGCCAGCAAACCCAAGTCCCCACAGGACAAGCT
GCGGTGCTTGGCCTAGCGGCACTCAAGCTCAGCACCTTCAACGTCGACGC
CCAGCTCGACGTCTTGTCGCCGGCGCGGGCACAGGGTAGGCCGGAGGGCG
CCGGTGGCGGGGAACGGAAGACCACCAGCGTCCCCAGGTTGAACAACCAC
CTACTCAGGAAGGTCGCGACGCTCGCGAACACCTAG
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