prot_Ecto-sp13_S_contig996.21607.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig996.21607.1
Unique Name	prot_Ecto-sp13_S_contig996.21607.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	297

Homology

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BLAST of mRNA_Ecto-sp13_S_contig996.21607.1 vs. uniprot
Match: A0A6H5K7M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M0_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 2.430e-35
Identity = 74/82 (90.24%), Postives = 75/82 (91.46%), Query Frame = 0

Query:    4 GRAAAAPEQQDQASSSSRDRPGDSVAGAARSLLRRRQGCRADRGRDGAEVELSLLPFPPEVMSLALLYAGGKTLSQAACVSK 85
            GRAAAAPEQQ QASSSSRDR GDS+AGAARSLLRRRQGCR   GRDGAE ELSLLPFPPEVMSLALLYA GKTLSQAACVSK
Sbjct:    3 GRAAAAPEQQHQASSSSRDRRGDSIAGAARSLLRRRQGCRVVGGRDGAEAELSLLPFPPEVMSLALLYAEGKTLSQAACVSK 84

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig996.21607.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig996.21607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1

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POSITION

0


Match Name	E-value	Identity	Description
A0A6H5K7M0_9PHAE	2.430e-35	90.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

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POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037293	Galactose oxidase, central domain superfamily	GENE3D	2.130.10.80		coord: 76..224 e-value: 4.8E-9 score: 37.9
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 136..216

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig996	contig	Ecto-sp13_S_contig996:7995..13817 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig996.21607.1	mRNA_Ecto-sp13_S_contig996.21607.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig996 7810..13817 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig996.21607.1 ID=prot_Ecto-sp13_S_contig996.21607.1|Name=mRNA_Ecto-sp13_S_contig996.21607.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp
MASGRAAAAPEQQDQASSSSRDRPGDSVAGAARSLLRRRQGCRADRGRDG
AEVELSLLPFPPEVMSLALLYAGGKTLSQAACVSKAVHRVVTAKHWETAA
AESRWLQRPTPDPSSFASPGEATRYWRRWSKLSSGAAGSPPGRVVVVGGN
EISSVEGSDKTEAFVDAPYGKTITWEALPRMSMSRSAAGATVDRFGGVYV
LGGWNSGGALSSCERLTHPLVSARQQRQRGGGLGMNGDTPACAARTPAPA
PAAAAAAAAAVSPAPLQRTTGGENGEFSVSAAAVGAAAAAAAGESDW

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037293	Gal_Oxidase_central_sf
IPR015915	Kelch-typ_b-propeller