|
Homology
BLAST of mRNA_Ecto-sp13_S_contig9934.21582.1 vs. uniprot
Match: D7FRD4_ECTSI (Retinitis pigmentosa 2 (X-linked recessive) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD4_ECTSI) HSP 1 Score: 280 bits (716), Expect = 1.470e-90 Identity = 176/197 (89.34%), Postives = 179/197 (90.86%), Query Frame = 0 Query: 1 HRDFTTRSLPRASRQRVGYTEHTHGAVVPITAGMRGFTEAEETCFIVVMPGHIDAVLGKLLAVGGGGDSPILATKSRLLRTKLFRPQMAQSKTFFLGAPSSMAELASSFPVLGMQWAGPGSAEAAVSLLATAGVSVPPSPATXXXXXXXXXXXXXXXXXXXXXXXXXDVGAGNGTSEYYMVAGRGDGGGDDDGRGGS 197
HRDFTTRSLP ASRQRVGYTE+THGAVVPITAGMRGFTEAEETCFIVVMPGHIDAVLGKLLAVGGGGDSPI AT SRLLRTKLFRPQMAQSKTFF GAPSSMAELASSFPVLGMQWAGPGSAEAAVSLLA AG XXXXXXXXXXXXXXXXXXXXXX D+GAGNGTSEYYMVAGRGDGGG+DDGR GS
Sbjct: 198 HRDFTTRSLPEASRQRVGYTENTHGAVVPITAGMRGFTEAEETCFIVVMPGHIDAVLGKLLAVGGGGDSPISATTSRLLRTKLFRPQMAQSKTFFSGAPSSMAELASSFPVLGMQWAGPGSAEAAVSLLAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSADIGAGNGTSEYYMVAGRGDGGGNDDGRSGS 394
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9934.21582.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match Name | E-value | Identity | Description | |
D7FRD4_ECTSI | 1.470e-90 | 89.34 | Retinitis pigmentosa 2 (X-linked recessive) n=1 Ta... | [more] |
back to top
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig9934.21582.1 ID=prot_Ecto-sp13_S_contig9934.21582.1|Name=mRNA_Ecto-sp13_S_contig9934.21582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=197bp HRDFTTRSLPRASRQRVGYTEHTHGAVVPITAGMRGFTEAEETCFIVVMP GHIDAVLGKLLAVGGGGDSPILATKSRLLRTKLFRPQMAQSKTFFLGAPS SMAELASSFPVLGMQWAGPGSAEAAVSLLATAGVSVPPSPATPPPPPPNE SSARKGKKPKEKANNSADVGAGNGTSEYYMVAGRGDGGGDDDGRGGS back to top
|