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Homology
BLAST of mRNA_Ecto-sp13_S_contig9915.21561.1 vs. uniprot
Match: D8LCE2_ECTSI (Nuclear pore complex protein Nup85 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCE2_ECTSI) HSP 1 Score: 479 bits (1234), Expect = 2.060e-161 Identity = 273/336 (81.25%), Postives = 277/336 (82.44%), Query Frame = 0 Query: 1 MGTAAAAAEGKTSSDGARVPGACGKAAYWLARSGGWVQLERLCAEVSERLMVEVSSGVGSAADVQ-AQQVVLAEADGVLAAVPPGVNGPELFFLGRYKEIADLLSAEAAAQPPPPHASGTGNSSPAAAGPGARLAGALAVDMLAPRGSCDGDAAVAGGSEALSTPTPPPRTWAHLLRLSVPALKAATDTAAXXXXXXXXXXXXXXXXEASAGVTVAQVHALLAKLQALVASEHRVGSVRGVWNRSRGGPGCGGGTLATAPAPYGFCSGGGSSVEQVSEIRRALAGCLGAAMMAQNTAEAAPEAVGSGRRRGGRGDFTLLGTRRLPAEALIDPRVAV 335
MGTA AAAEG+TSSDGARVPGACGKAAYWLA+ GGWVQLERLCAEVSERLMVEV SGVGSAADVQ AQQVVLAEADGVLAAVPPGVNGPEL FLGRYKEIADLLSAEAA QPPPPHASG G+SSPAA GPGARLAGALAVDMLAPRGSCDGDA VAG A D EASAGVTVAQVHALLAKLQALVASEHRVGSVRGVWNRSRGGPGCGGGTLATAPAPYGFCSGGGS VEQVSEIRRALAGCLGAAMMAQN AEAAPEAVGSGRRRGGRGDFTLLGTRRLPAEAL+DPRVAV
Sbjct: 510 MGTAVAAAEGETSSDGARVPGACGKAAYWLAKGGGWVQLERLCAEVSERLMVEVYSGVGSAADVQQAQQVVLAEADGVLAAVPPGVNGPELSFLGRYKEIADLLSAEAAGQPPPPHASGIGSSSPAAVGPGARLAGALAVDMLAPRGSCDGDAPVAG---------------------------AGADEGE----------------EASAGVTVAQVHALLAKLQALVASEHRVGSVRGVWNRSRGGPGCGGGTLATAPAPYGFCSGGGSGVEQVSEIRRALAGCLGAAMMAQNAAEAAPEAVGSGRRRGGRGDFTLLGTRRLPAEALVDPRVAV 802
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9915.21561.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| D8LCE2_ECTSI | 2.060e-161 | 81.25 | Nuclear pore complex protein Nup85 n=2 Tax=Ectocar... | [more] |
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Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig9915.21561.1 ID=prot_Ecto-sp13_S_contig9915.21561.1|Name=mRNA_Ecto-sp13_S_contig9915.21561.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=336bp
MGTAAAAAEGKTSSDGARVPGACGKAAYWLARSGGWVQLERLCAEVSERL
MVEVSSGVGSAADVQAQQVVLAEADGVLAAVPPGVNGPELFFLGRYKEIA
DLLSAEAAAQPPPPHASGTGNSSPAAAGPGARLAGALAVDMLAPRGSCDG
DAAVAGGSEALSTPTPPPRTWAHLLRLSVPALKAATDTAAAAATAGGSAA
GAGEGEEASAGVTVAQVHALLAKLQALVASEHRVGSVRGVWNRSRGGPGC
GGGTLATAPAPYGFCSGGGSSVEQVSEIRRALAGCLGAAMMAQNTAEAAP
EAVGSGRRRGGRGDFTLLGTRRLPAEALIDPRVAV* back to top
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