Homology
BLAST of mRNA_Ecto-sp13_S_contig9912.21558.1 vs. uniprot
Match:
A0A6H5JTZ0_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ0_9PHAE)
HSP 1 Score: 179 bits (453), Expect = 3.320e-49
Identity = 90/93 (96.77%), Postives = 90/93 (96.77%), Query Frame = 0
Query: 1 LKRSKSQVAQTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKGLRGGPPGHPMHGHGHGPGGRF 93
LKRSKSQVA TIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRD KG RGGPPGHPMHGHGHGPGGRF
Sbjct: 262 LKRSKSQVAGTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDAKGPRGGPPGHPMHGHGHGPGGRF 354
BLAST of mRNA_Ecto-sp13_S_contig9912.21558.1 vs. uniprot
Match:
D8LFK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK7_ECTSI)
HSP 1 Score: 168 bits (426), Expect = 5.670e-47
Identity = 87/94 (92.55%), Postives = 88/94 (93.62%), Query Frame = 0
Query: 1 LKRSKSQVAQTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKGLRGGPPGHPMHGHGHGPGGRFG 94
LKRSKSQVA+TIVADHVQRLL LNGVELP DEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKG RGGPPGHPMHGH PGGRFG
Sbjct: 237 LKRSKSQVARTIVADHVQRLLILNGVELPGDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKGPRGGPPGHPMHGHXXXPGGRFG 330
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9912.21558.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
L K R S K S Q V A Q T I V A D H V Q R L L G L N G V E L P E D E V Q P L L Q A L R V R S R R L V R L G L L G P E F L E D M P D G H Y H R D G K G L R G G P P G H P M H G H G H G P G G R F G G G G G G G G G G S R G G G P L P G R G G G A P P M M P F H S P P P F H Y Q G G G F S G P H G G G G A E G A A H R S P P R R G P P P P H M M G M G M G G P P M E P S H D H H H Q R G G G R H P P P P H M R G 20 40 60 80 100 120 140 160 180 Expect = 3.32e-49 / Id = 96.77 Expect = 5.67e-47 / Id = 92.55 Sequence A0A6H5JTZ0_9PHAE D8LFK7_ECTSI
Match Name E-value Identity Description
A0A6H5JTZ0_9PHAE 3.320e-49 96.77 PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more] D8LFK7_ECTSI 5.670e-47 92.55 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig9912.21558.1 ID=prot_Ecto-sp13_S_contig9912.21558.1|Name=mRNA_Ecto-sp13_S_contig9912.21558.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp back to top