Homology
BLAST of mRNA_Ecto-sp13_S_contig9911.21556.1 vs. uniprot
Match:
D7FXY1_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY1_ECTSI)
HSP 1 Score: 500 bits (1287), Expect = 3.800e-176
Identity = 312/335 (93.13%), Postives = 322/335 (96.12%), Query Frame = 0
Query: 1 MMPTSSRFSHPDGNLPPPERRRRLDEYGAVEEIYSFSSTSGSSTSAGGRGAAGLLVHPQRSHGDIFQELMSRRAHDMISGAQDVVAGAGMIREETQRQNRALRGENDTLRACVDMLLAEAGXXXXXXXXXXXXXXXSSGVSPFQASPMQLLSAARGVRDRNHQRELALSAAAATAESALRAERTRREGAEVEARLSRKAASS-REARGRRQNQQQ-VVGRGHLGGAFSMALRAIKREKAYFMNAVEDRKRAERALAEERADRRQAETAARTXXXXXXXXXXXXXXXXXCVICSTRRRSRALLPCGHLVMCDRCPVVSTCPICDQQVRRTMPGTLS 333
MMPTS RFSHPDGNLPPPERRRRLDEYG+VEE+YS+SSTS STSAGGRGAAGL VH QRSHGDIFQEL+SRRAHDMISGAQDVVAGAGMIREETQRQNRALRGENDTLRACVDMLLAEAGXXXXXXXXXXXXXXXSSGVSPFQ+SPMQLLSAARGVRDRNHQRELALSAAAATAESALRAER RREGAEVEARLSR+AASS R+ARGRRQNQQQ VVGRG+LG FSMALRA+KREKAYFM+AVEDRKRAERALAEERADRRQAETAARTXXXXXXXXXXXXXXXXX CSTRRRSRALLPCGHLVMCDRCPVVSTCPICDQQVRRTMPGTLS
Sbjct: 1 MMPTSGRFSHPDGNLPPPERRRRLDEYGSVEELYSYSSTS--STSAGGRGAAGLPVHAQRSHGDIFQELISRRAHDMISGAQDVVAGAGMIREETQRQNRALRGENDTLRACVDMLLAEAGXXXXXXXXXXXXXXXSSGVSPFQSSPMQLLSAARGVRDRNHQRELALSAAAATAESALRAERNRREGAEVEARLSREAASSSRQARGRRQNQQQQVVGRGYLGETFSMALRALKREKAYFMDAVEDRKRAERALAEERADRRQAETAARTXXXXXXXXXXXXXXXXXXXXCSTRRRSRALLPCGHLVMCDRCPVVSTCPICDQQVRRTMPGTLS 333
BLAST of mRNA_Ecto-sp13_S_contig9911.21556.1 vs. uniprot
Match:
A0A6J1D544_MOMCH (RING-type E3 ubiquitin transferase n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D544_MOMCH)
HSP 1 Score: 55.8 bits (133), Expect = 4.660e-5
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query: 287 CVICSTRRRSRALLPCGHLVMCDRCPV------VSTCPICDQQVRRTM 328
CVIC TRRR A +PCGHLV C+RC + CP+C QQ+R ++
Sbjct: 344 CVICLTRRRRSAFIPCGHLVCCERCAISVERESAPKCPVCRQQIRSSV 391
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9911.21556.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M M P T S S R F S H P D G N L P P P E R R R R L D E Y G A V E E I Y S F S S T S G S S T S A G G R G A A G L L V H P Q R S H G D I F Q E L M S R R A H D M I S G A Q D V V A G A G M I R E E T Q R Q N R A L R G E N D T L R A C V D M L L A E A G G G G S T S G G G G G S S G G S S G V S P F Q A S P M Q L L S A A R G V R D R N H Q R E L A L S A A A A T A E S A L R A E R T R R E G A E V E A R L S R K A A S S R E A R G R R Q N Q Q Q V V G R G H L G G A F S M A L R A I K R E K A Y F M N A V E D R K R A E R A L A E E R A D R R Q A E T A A R T A L Q E E R T K R E Q A E S L A K C V I C S T R R R S R A L L P C G H L V M C D R C P V V S T C P I C D Q Q V R R T M P G T L S * 50 100 150 200 250 300 Expect = 3.80e-176 / Id = 93.13 Expect = 4.66e-5 / Id = 50.00 Sequence D7FXY1_ECTSI A0A6J1D544_MOMCH
Match Name E-value Identity Description
D7FXY1_ECTSI 3.800e-176 93.13 RING-type domain-containing protein n=2 Tax=Ectoca... [more] A0A6J1D544_MOMCH 4.660e-5 50.00 RING-type E3 ubiquitin transferase n=1 Tax=Momordi... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M M P T S S R F S H P D G N L P P P E R R R R L D E Y G A V E E I Y S F S S T S G S S T S A G G R G A A G L L V H P Q R S H G D I F Q E L M S R R A H D M I S G A Q D V V A G A G M I R E E T Q R Q N R A L R G E N D T L R A C V D M L L A E A G G G G S T S G G G G G S S G G S S G V S P F Q A S P M Q L L S A A R G V R D R N H Q R E L A L S A A A A T A E S A L R A E R T R R E G A E V E A R L S R K A A S S R E A R G R R Q N Q Q Q V V G R G H L G G A F S M A L R A I K R E K A Y F M N A V E D R K R A E R A L A E E R A D R R Q A E T A A R T A L Q E E R T K R E Q A E S L A K C V I C S T R R R S R A L L P C G H L V M C D R C P V V S T C P I C D Q Q V R R T M P G T L S * 50 100 150 200 250 300 Score = Expect = 1.6E-8 / Score = 34.3 Score = Score = Expect = 1.0E-11 / Score = 46.0 Score = 8.698 Sequence Coil PF13920 PTHR22696 SSF57850 G3DSA:3.30.40.10 PS50089
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 239..273 None No IPR available PFAM PF13920 zf-C3HC4_3 coord: 286..326 None No IPR available PANTHER PTHR22696 RING FINGER PROTEIN 26 RNF26 coord: 160..328 None No IPR available SUPERFAMILY 57850 RING/U-box coord: 286..326 IPR013083 Zinc finger, RING/FYVE/PHD-type GENE3D 3.30.40.10 coord: 260..329 IPR001841 Zinc finger, RING-type PROSITE PS50089 ZF_RING_2 coord: 287..321
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig9911.21556.1 ID=prot_Ecto-sp13_S_contig9911.21556.1|Name=mRNA_Ecto-sp13_S_contig9911.21556.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=334bp back to top
Annotated Terms
The following terms have been associated with this polypeptide: