prot_Ecto-sp13_S_contig9830.21478.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9830.21478.1
Unique Nameprot_Ecto-sp13_S_contig9830.21478.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length146
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9830.21478.1 vs. uniprot
Match: A0A6H5KMV8_9PHAE (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMV8_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 3.170e-79
Identity = 132/147 (89.80%), Postives = 136/147 (92.52%), Query Frame = 0 
Query:    1 MRPACLQAAVPLAVLLCSSDRSGAFIAQAPATV-SSGGCSSTSICSGALVQPRQDRQATVLHHLDWRHRPGRSARHVVFLERADRDKAFELLETYIERESDAGEREDYDRIRRLVPHMRKRLWKASSREQEDATEQLGMDDFQFATK 146
            MR ACLQAAVP+AVLLCSSD S AFIAQAPA   SS GCSSTS CSGA+ QP+Q RQATVLHHLDWRHRPGRSA+HVVFLERADRDKAFELLETYIERESDAGEREDYDRIR LVPHMRKRLWKASSREQEDATEQLGMDDFQFATK
Sbjct:    1 MRHACLQAAVPVAVLLCSSDWSSAFIAQAPAAAASSSGCSSTSTCSGAIRQPQQGRQATVLHHLDWRHRPGRSAQHVVFLERADRDKAFELLETYIERESDAGEREDYDRIRGLVPHMRKRLWKASSREQEDATEQLGMDDFQFATK 147
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9830.21478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KMV8_9PHAE3.170e-7989.80Asp_Arg_Hydrox domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..35
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9830contigEcto-sp13_S_contig9830:3463..6140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9830.21478.1mRNA_Ecto-sp13_S_contig9830.21478.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9830 3463..6140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9830.21478.1 ID=prot_Ecto-sp13_S_contig9830.21478.1|Name=mRNA_Ecto-sp13_S_contig9830.21478.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=146bp
MRPACLQAAVPLAVLLCSSDRSGAFIAQAPATVSSGGCSSTSICSGALVQ
PRQDRQATVLHHLDWRHRPGRSARHVVFLERADRDKAFELLETYIERESD
AGEREDYDRIRRLVPHMRKRLWKASSREQEDATEQLGMDDFQFATK
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