Homology
BLAST of mRNA_Ecto-sp13_S_contig9826.21473.1 vs. uniprot
Match:
A0A6H5KLJ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLJ1_9PHAE)
HSP 1 Score: 546 bits (1406), Expect = 3.970e-192
Identity = 290/311 (93.25%), Postives = 294/311 (94.53%), Query Frame = 0
Query: 1 MPRRLLAAVCAGAAALFLLHCGHCFTFVTTTSPVLSPRSTAYPRSRFAPSSSRGGITMSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKARLWILFSSPPCQPPWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENNEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEI 311
MPRRLLAAV AG AALFLL CG FTFVTTTSPVLSPRST YP SRFAP S+RGGI+MSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKAR + PP PWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVEN+EIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEI
Sbjct: 1 MPRRLLAAVFAGVAALFLLQCGDGFTFVTTTSPVLSPRSTVYPPSRFAPLSTRGGISMSGSSNGRESYSWDEDVLDRAVKDMLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKARN---NARPPTLSPWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENDEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEI 308
BLAST of mRNA_Ecto-sp13_S_contig9826.21473.1 vs. uniprot
Match:
A0A2V3J0R6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0R6_9FLOR)
HSP 1 Score: 55.5 bits (132), Expect = 4.370e-5
Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 0
Query: 214 VQPAELAKKLMDIREQLALEWREDLKNIEVENNEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLT 309
V+P LAK+++DIR+QLA EW DL+ IE+EN EI R+ A E DE + S+R+L +D F D +PLR NY L +T
Sbjct: 136 VEPFRLAKRILDIRKQLAAEWVGDLRCIEMENLEIQRM-------AIERALCSDEAQ----LESKRKLIFDS-DPFASDQTPLRYKNYHALKTLIT 219
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9826.21473.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M P R R L L A A V C A G A A A L F L L H C G H C F T F V T T T S P V L S P R S T A Y P R S R F A P S S S R G G I T M S G S S N G R E S Y S W D E D V L D R A V K D M L V D R A V E T V R H L W N E T G G D I Y G Q W L D R F T A R Q N L G D D V I S T M G W A R F L I K M M R E E P V E A V V I R T A K K D S P Q V I E A Q R K A R L W I L F S S P P C Q P P W R H S V N Q L S A D W D A E E E E E M K V A L D Y P P Q L K A V K R S V V V Q P A E L A K K L M D I R E Q L A L E W R E D L K N I E V E N N E I V R L D N D R R R R A R E A G P G Y D E V E Q G G G G G S R R R L T Y D H G Q A F G G D S S P L R S D N Y E T L V G Y L T E I 50 100 150 200 250 300 Expect = 3.97e-192 / Id = 93.25 Expect = 4.37e-5 / Id = 40.63 Sequence A0A6H5KLJ1_9PHAE A0A2V3J0R6_9FLOR back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M P R R L L A A V C A G A A A L F L L H C G H C F T F V T T T S P V L S P R S T A Y P R S R F A P S S S R G G I T M S G S S N G R E S Y S W D E D V L D R A V K D M L V D R A V E T V R H L W N E T G G D I Y G Q W L D R F T A R Q N L G D D V I S T M G W A R F L I K M M R E E P V E A V V I R T A K K D S P Q V I E A Q R K A R L W I L F S S P P C Q P P W R H S V N Q L S A D W D A E E E E E M K V A L D Y P P Q L K A V K R S V V V Q P A E L A K K L M D I R E Q L A L E W R E D L K N I E V E N N E I V R L D N D R R R R A R E A G P G Y D E V E Q G G G G G S R R R L T Y D H G Q A F G G D S S P L R S D N Y E T L V G Y L T E I 50 100 150 200 250 300 Score = Score = Score = Score = Score = Score = 0.774 Score = Sequence SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_N_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_H_REGION SignalP-noTM TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..24 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 20..24 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..4 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 25..311 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 5..19 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..24 None No IPR available TMHMM TMhelix coord: 5..27
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig9826.21473.1 ID=prot_Ecto-sp13_S_contig9826.21473.1|Name=mRNA_Ecto-sp13_S_contig9826.21473.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp back to top