prot_Ecto-sp13_S_contig9743.21386.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9743.21386.1
Unique Nameprot_Ecto-sp13_S_contig9743.21386.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length117
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9743.21386.1 vs. uniprot
Match: D7FS49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS49_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 2.820e-18
Identity = 52/62 (83.87%), Postives = 54/62 (87.10%), Query Frame = 0 
Query:   45 MGVRLLGSPRSRRACPPAGVPPASGRAAAXXXXXXXA-EGVGLREAGWGSGAQPQGPRDRRV 105
            MG RLLGSPR RRACPPAGVPPASGRAAAXXXXXXX  EGVGLRE GWG+ AQP  PRDRR+
Sbjct:    1 MGARLLGSPRFRRACPPAGVPPASGRAAAXXXXXXXXXEGVGLREEGWGAAAQPPEPRDRRL 62
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9743.21386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FS49_ECTSI2.820e-1883.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9743contigEcto-sp13_S_contig9743:590..940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9743.21386.1mRNA_Ecto-sp13_S_contig9743.21386.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9743 543..1413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9743.21386.1 ID=prot_Ecto-sp13_S_contig9743.21386.1|Name=mRNA_Ecto-sp13_S_contig9743.21386.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=117bp
MPVGGAPITPTCTSSTCCCSSSSNNSSRQRRPASTTTPAGGLRTMGVRLL
GSPRSRRACPPAGVPPASGRAAATASAAAAAEGVGLREAGWGSGAQPQGP
RDRRVRWRRMETRCAA*
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