prot_Ecto-sp13_S_contig9733.21370.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9733.21370.1
Unique Nameprot_Ecto-sp13_S_contig9733.21370.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9733.21370.1 vs. uniprot
Match: A0A6H5KLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB3_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 4.980e-39
Identity = 85/92 (92.39%), Postives = 86/92 (93.48%), Query Frame = 0 
Query:    1 GEGLPYGPVGTTWAVINAQWWRQWRDYVRIGFDATMPRGSLSRVSSNSSIASXXXXXXXXXRQGPPATVAGAGVRSGTVPNGRTSGGAVGGD 92
            GEGLPYGPVGTTWAVINA+W   WRDYVRIGFDATMPRGSLSRVSSNSSIASXXXXXXXXXRQGPPATVAGAGVRSGTV NGR SGG VGGD
Sbjct:  620 GEGLPYGPVGTTWAVINARWLAGWRDYVRIGFDATMPRGSLSRVSSNSSIASXXXXXXXXXRQGPPATVAGAGVRSGTVANGRASGGGVGGD 711
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BLAST of mRNA_Ecto-sp13_S_contig9733.21370.1 vs. uniprot
Match: D8LR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR49_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.420e-26
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0 
Query:    1 GEGLPYGPVGTTWAVINAQWWRQWRDYVRIGFDATMPRGSLSRVSSNSSIA 51
            GEGLPYGPVGTTWAVINAQWW QWRDYVRIGFDATMPRGSLSRVSSNSSIA
Sbjct:  558 GEGLPYGPVGTTWAVINAQWWAQWRDYVRIGFDATMPRGSLSRVSSNSSIA 608
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9733.21370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLB3_9PHAE4.980e-3992.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR49_ECTSI2.420e-2698.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9733contigEcto-sp13_S_contig9733:1737..2518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9733.21370.1mRNA_Ecto-sp13_S_contig9733.21370.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9733 1737..2518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9733.21370.1 ID=prot_Ecto-sp13_S_contig9733.21370.1|Name=mRNA_Ecto-sp13_S_contig9733.21370.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
GEGLPYGPVGTTWAVINAQWWRQWRDYVRIGFDATMPRGSLSRVSSNSSI
ASNGGGSSSGGRQGPPATVAGAGVRSGTVPNGRTSGGAVGGD
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