prot_Ecto-sp13_S_contig9689.21321.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9689.21321.1
Unique Nameprot_Ecto-sp13_S_contig9689.21321.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length195
Homology
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: D7G069_ECTSI (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G069_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 6.840e-120
Identity = 183/194 (94.33%), Postives = 185/194 (95.36%), Query Frame = 0
Query:    1 MVYLATPEGGGFMMGPLDKPAKERKAAQRREKHIDDAEEITPMMEMKGSKKAKQNKDQTQMRIAKMRAHERQKEDAGSKKDMFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNFDHRSEGPKSDYYDPLTHGNRESNRQ 194
            MVYLATPEGGGFMMGPLDKP KERK AQRREKHIDDAEEITPMMEMKG KKAKQNKDQTQMRIAKMR HE  KEDAGSKKDMFETL+NPKSFTQTVENLFDFSFFVK GEGHITIDPETKLPQVKFD ST SGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNF+HRSEGPKSDYYDPLTHGNRESNRQ
Sbjct:  255 MVYLATPEGGGFMMGPLDKPVKERKTAQRREKHIDDAEEITPMMEMKG-KKAKQNKDQTQMRIAKMREHE--KEDAGSKKDMFETLVNPKSFTQTVENLFDFSFFVKRGEGHITIDPETKLPQVKFDPSTQSGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNFEHRSEGPKSDYYDPLTHGNRESNRQ 445          
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: A0A6H5JPS6_9PHAE (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS6_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 2.340e-74
Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = 0
Query:   82 MFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNFDHRSEGPKSDYYDPLTHGNRESNRQ 194
            MFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQST SGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNF+HRSEGPKSDYYDPLTHGNRESNRQ
Sbjct:    1 MFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTPSGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNFEHRSEGPKSDYYDPLTHGNRESNRQ 113          
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: A0A6H5JT36_9PHAE (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT36_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 8.030e-33
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 MVYLATPEGGGFMMGPLDKPAKERKAAQRREKHIDDAEEITPMMEMKGSKKAKQNKDQTQMRIAKMR 67
            MV+LA PEGGGFMMGPLDKPAKERKAAQRREKHIDDAEEITPMMEMKGSKKAKQNKDQTQMRIAKMR
Sbjct:  156 MVFLAAPEGGGFMMGPLDKPAKERKAAQRREKHIDDAEEITPMMEMKGSKKAKQNKDQTQMRIAKMR 222          
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: A0A835YSI9_9STRA (Non-structural maintenance of chromosomes element 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI9_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.420e-17
Identity = 68/186 (36.56%), Postives = 99/186 (53.23%), Query Frame = 0
Query:   12 FMMGPLDKPAKER---------KAAQR--REKHIDDAEEITPMMEMKGSKKAKQNKDQTQMRIAKMRAHERQKEDAGSKKDMFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSFTPADFRELKELYGME--ESNFDHRSEGPKSDYYDPL 184
             M+GPLDKP             +A QR  ++K  D+ E + P+   +G K+A+Q KD  Q+R   M+    +    G   +  + ++NP SFTQTVEN+FDF+F++K+G   + +D E      +F +     DA  A+    KQ ++SFT  DF+ L EL G+E  E     R  G  SDYYDPL
Sbjct:  187 LMLGPLDKPKYXXXXXXXXXVVRAVQRERKQKPKDNFERVVPITVKEGGKEAEQ-KDPQQIRQTAMKDRFLE---PGRSAEFAKFIMNPNSFTQTVENMFDFTFYIKNGLTGLAVDKEAGKLNTQFTRILSQDDA--ASRSSNKQSVLSFTRQDFKNLIELCGLEGQEPMIPARPMGAGSDYYDPL 366          
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: A0A835Z541_9STRA (Non-structural maintenance of chromosomes element 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z541_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 9.200e-17
Identity = 65/176 (36.93%), Postives = 94/176 (53.41%), Query Frame = 0
Query:   12 FMMGPLDKPAKERKAA-QRREKHIDDAEEITPMMEMKGSKKAKQNKDQTQMRIAKMRAHERQKEDAGSKKDMFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSFTPADFRELKELYGME--ESNFDHRSEGPKSDYYDPL 184
            FM+GPLD+    R    QR++K  DD E + P+   KG K   + KD   +R A M+    +    G  ++  + ++N  SFT+TVEN+FDF+ F+K G   +++D E      +F +     DA  A S + KQ ++SFT  DF +L EL G+E  E     R     SDYYDPL
Sbjct:  125 FMLGPLDRHEVVRAVRRQRKQKPNDDFESVAPLRVKKGGK---EQKDPEHIRKAAMKDRFLE---PGCSQEFAKFIMNSSSFTETVENMFDFTDFIKHGLTGLSVDTEAGTLNAQFTRILTQDDAAAARSKN-KQAVLSFTKQDFVDLIELCGLEGQEPTIPDRRTVDGSDYYDPL 293          
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: D0NM46_PHYIT (Non-structural maintenance of chromosomes element 4 n=9 Tax=Phytophthora TaxID=4783 RepID=D0NM46_PHYIT)

HSP 1 Score: 75.9 bits (185), Expect = 7.160e-13
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 0
Query:    3 YLATPEGGGFMMGPLDKPA--KERKAAQRREKHIDDAEEITPMMEMKGSKKAKQNKDQTQMRIAKMRAHERQKEDAGSKKDMFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNFDHRS 173
            + + PE   F+ G +D     KERK A+R ++ ++ A+E  P      +KK +++    ++ I + +  E ++      K +F+ +INPKSFTQTVENLFD SF V++    I ID  + LP +K  +     + PP+      Q ++S TPA + +L  + G EE    HRS
Sbjct:  179 FRSVPESS-FLFGLMDTEVVRKERKKARRAQEDVN-AQEAQPTEYT--NKKDRKDAQARRLEILQSKLSEGERV-----KPLFDMVINPKSFTQTVENLFDTSFLVRNNSAEIGIDDGSGLPYLKNQEGLNEANLPPST-----QSIISITPAQWEQLASVTGREEPLLGHRS 337          
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: A0A225VE20_9STRA (Non-structural maintenance of chromosomes element 4 (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VE20_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.570e-12
Identity = 49/152 (32.24%), Postives = 84/152 (55.26%), Query Frame = 0
Query:   22 KERKAAQRREKHIDDAEEITPMMEMKGSKKAKQNKDQTQMRIAKMRAHERQKEDAGSKKDMFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNFDHRS 173
            KERK A+R  + ++ A+E  P      +KK +++    ++ I + +  ER       +  +F+ +INPKSFTQTVENLFD SF V++    + ID +T LP +   +     + PP++     Q ++S TPA ++++  + G +E    HR+
Sbjct:    2 KERKKARRVHEDVN-AQEAQPTEYT--NKKDRKDAQARRLEILQNKMQER-----NDRHSLFDMVINPKSFTQTVENLFDTSFLVRNSSAEVGIDEDTGLPYLYNHEGREEDNLPPSS-----QSIISITPAQWQQIARMTGRDEPLLGHRT 140          
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: A0A662XMQ2_9STRA (Non-structural maintenance of chromosomes element 4 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMQ2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.520e-12
Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 0
Query:   79 KKDMFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNFDHRS 173
            KK +F+ ++NPKSFTQTVENLFD SF V++G   I +D +T LP ++  +     D P  A     Q ++S TPA +++L  L   EE    HRS
Sbjct:  247 KKPLFDVVVNPKSFTQTVENLFDTSFLVRNGSMEIGVDQDTGLPYLENHEGQNDKDVPAQA-----QSIISITPAQWQQLAHLTQHEEPVLGHRS 336          
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: H3HE45_PHYRM (Non-structural maintenance of chromosomes element 4 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HE45_PHYRM)

HSP 1 Score: 73.6 bits (179), Expect = 8.090e-12
Identity = 51/164 (31.10%), Postives = 85/164 (51.83%), Query Frame = 0
Query:   12 FMMGPLDKPA--KERKAAQRREKHIDDAEEITPMMEMKGSKKAKQNKDQTQMRIAKMRAHERQKEDAGSKKDMFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNFDHRS 173
            F+ G LD     KERK A+R ++ ++ A+E  P        +    KD+   +  ++   +    +   ++ +F+ ++NPKSFTQTVENLFD SF V++    + ID  T LP ++  +  +  D P +      Q ++S TPA + +L  + G +E    HRS
Sbjct:  499 FLFGLLDTEVVRKERKKAKRVQEDVN-AQEAQPT-------EYTNKKDRKDAQARRLEVLQTMLNEGKRRESLFDVVVNPKSFTQTVENLFDTSFLVRNSSAEVGIDEATGLPYLENHEGMVDADMPAST-----QSIISITPAQWEQLARVTGRDEPLLGHRS 649          
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Match: A0A3R7KJ98_9STRA (Non-structural maintenance of chromosomes element 4 n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KJ98_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.200e-11
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0
Query:   82 MFETLINPKSFTQTVENLFDFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSFTPADFRELKELYGMEESNFDHRS 173
            MFE L+NPKSF QTVENLFD SF V++    I +D  T LP ++  +   + D PP++     Q ++S TP  + ++ +L G EE    HRS
Sbjct:  205 MFEVLVNPKSFAQTVENLFDTSFLVRNSSVEIGVDENTGLPYLQNHEGEGNTDLPPSS-----QSIISITPDQWEQIAQLTGREEPVLGHRS 291          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9689.21321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G069_ECTSI6.840e-12094.33Non-structural maintenance of chromosomes element ... [more]
A0A6H5JPS6_9PHAE2.340e-7498.23Non-structural maintenance of chromosomes element ... [more]
A0A6H5JT36_9PHAE8.030e-3397.01Non-structural maintenance of chromosomes element ... [more]
A0A835YSI9_9STRA1.420e-1736.56Non-structural maintenance of chromosomes element ... [more]
A0A835Z541_9STRA9.200e-1736.93Non-structural maintenance of chromosomes element ... [more]
D0NM46_PHYIT7.160e-1333.53Non-structural maintenance of chromosomes element ... [more]
A0A225VE20_9STRA5.570e-1232.24Non-structural maintenance of chromosomes element ... [more]
A0A662XMQ2_9STRA6.520e-1243.16Non-structural maintenance of chromosomes element ... [more]
H3HE45_PHYRM8.090e-1231.10Non-structural maintenance of chromosomes element ... [more]
A0A3R7KJ98_9STRA1.200e-1142.39Non-structural maintenance of chromosomes element ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014854Non-structural maintenance of chromosome element 4, C-terminalPFAMPF08743Nse4_Ccoord: 81..171
e-value: 2.2E-18
score: 66.3
IPR027786Nse4/EID familyPANTHERPTHR16140UNCHARACTERIZEDcoord: 11..173
NoneNo IPR availablePANTHERPTHR16140:SF0NSE4 HOMOLOG A, SMC5-SMC6 COMPLEX COMPONENTcoord: 11..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9689contigEcto-sp13_S_contig9689:1453..5537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9689.21321.1mRNA_Ecto-sp13_S_contig9689.21321.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9689 729..5871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9689.21321.1 ID=prot_Ecto-sp13_S_contig9689.21321.1|Name=mRNA_Ecto-sp13_S_contig9689.21321.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp
MVYLATPEGGGFMMGPLDKPAKERKAAQRREKHIDDAEEITPMMEMKGSK
KAKQNKDQTQMRIAKMRAHERQKEDAGSKKDMFETLINPKSFTQTVENLF
DFSFFVKSGEGHITIDPETKLPQVKFDQSTLSGDAPPAASGDAKQWLMSF
TPADFRELKELYGMEESNFDHRSEGPKSDYYDPLTHGNRESNRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014854Nse4_C
IPR027786Nse4/EID