prot_Ecto-sp13_S_contig9684.21317.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9684.21317.1
Unique Nameprot_Ecto-sp13_S_contig9684.21317.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length109
Homology
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Match: D8LNH9_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNH9_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 8.840e-63
Identity = 96/108 (88.89%), Postives = 98/108 (90.74%), Query Frame = 0
Query:    1 LSPQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEASLSLHTMLFVDMRNGALRVLEEKGIDMEPVL 108
            +SPQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE          VDMRNGAL+VLEEKGIDMEPVL
Sbjct:    1 MSPQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE----------VDMRNGALKVLEEKGIDMEPVL 98          
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Match: A0A6H5K175_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K175_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.770e-55
Identity = 96/106 (90.57%), Postives = 98/106 (92.45%), Query Frame = 0
Query:    3 PQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEASLSLHTMLFVDMRNGALRVLEEKGIDMEPVL 108
            P+RSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEA       + VDMRNGALRVLEEKGIDMEPVL
Sbjct:  856 PERSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEA-------IEVDMRNGALRVLEEKGIDMEPVL 954          
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Match: A0A6H5LC05_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC05_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 4.030e-46
Identity = 80/104 (76.92%), Postives = 86/104 (82.69%), Query Frame = 0
Query:    3 PQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEASLSLHTMLFVDMRNGALRVLEEKGIDMEP 106
            P+RS HL+LLSWPRWFDWI+RFIRPL+SESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE          V MRN  + VLEE  + MEP
Sbjct:  523 PERSAHLMLLSWPRWFDWIYRFIRPLISESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE----------VAMRNSVVTVLEENDVAMEP 616          
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Match: D7G352_ECTSI (Phosphatidylinositol transfer protein SEC14 and related proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G352_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 8.370e-43
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 0
Query:    4 QRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEA 77
            QRS HLLLLSWPRWFDWI+RFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE+
Sbjct:  298 QRSAHLLLLSWPRWFDWIYRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYES 371          
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Match: D8LL64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL64_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.150e-20
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:   37 MTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE 76
            MTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE
Sbjct:    1 MTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYE 40          
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Match: A0A7S1UMG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UMG2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.630e-8
Identity = 36/78 (46.15%), Postives = 44/78 (56.41%), Query Frame = 0
Query:    3 PQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSK-IDNDQIPKEYGGASEYALGEHPYEASL 79
            P       L++ P W    F   R +L ES K  + S    S   T L K ID++QIPKEYGG+S+YALGEHPYE  L
Sbjct:  528 PMAMKRAFLVNSPWWLAGAFSGFRSILPESVKVDILS---ESQSVTALRKFIDDNQIPKEYGGSSQYALGEHPYEVGL 602          
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Match: A0A7S1ZXQ5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZXQ5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.760e-6
Identity = 27/65 (41.54%), Postives = 35/65 (53.85%), Query Frame = 0
Query:   15 PRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLLSKIDNDQIPKEYGGASEYALGEHPYEASL 79
            P W    + +    L ES    M S + ++    L   +D+DQIPKEYGG+S Y LGEHP E  L
Sbjct:  297 PFWLAGSYSYANRFLPESVAVSMMSSSKSAAEGGLRDFVDDDQIPKEYGGSSPYKLGEHPLEIEL 361          
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Match: A0A7S1DB15_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DB15_CYCTE)

HSP 1 Score: 51.2 bits (121), Expect = 3.720e-5
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0
Query:   53 IDNDQIPKEYGGASEYALGEHPYEASL 79
            ID+DQIPK+YGG+S YALGEHPYE  L
Sbjct:   17 IDDDQIPKQYGGSSPYALGEHPYEKDL 43          
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Match: B8CAC2_THAPS (Phosphatidylinositol/phosphatidylcholine transfer protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAC2_THAPS)

HSP 1 Score: 50.4 bits (119), Expect = 6.640e-5
Identity = 28/81 (34.57%), Postives = 45/81 (55.56%), Query Frame = 0
Query:    3 PQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTAN----SVYETLLSKIDNDQIPKEYGGASEYALGEHPYEASL 79
            P+R+  + +L+ P +F  I+R I+PL+   T  K+     N    ++ + L+ +I    IP+EYGG S+Y LG  P E  L
Sbjct:  239 PERAGTIYILNSPPFFQVIWRMIKPLVDPVTLDKVRVVQNNQGHFAIRDALMERIPIQNIPREYGGESQYMLGGAPEEQLL 319          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9684.21317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LNH9_ECTSI8.840e-6388.89CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K175_9PHAE1.770e-5590.57CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LC05_9PHAE4.030e-4676.92CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
D7G352_ECTSI8.370e-4395.95Phosphatidylinositol transfer protein SEC14 and re... [more]
D8LL64_ECTSI1.150e-20100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1UMG2_9STRA1.630e-846.15Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S1ZXQ5_9STRA1.760e-641.54Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1DB15_CYCTE3.720e-577.78Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B8CAC2_THAPS6.640e-534.57Phosphatidylinositol/phosphatidylcholine transfer ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 2..89
e-value: 2.1E-14
score: 55.2
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 3..75
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 3..64
e-value: 4.1E-12
score: 46.1
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 1..70
score: 11.304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9684contigEcto-sp13_S_contig9684:1401..3300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9684.21317.1mRNA_Ecto-sp13_S_contig9684.21317.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9684 1401..3300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9684.21317.1 ID=prot_Ecto-sp13_S_contig9684.21317.1|Name=mRNA_Ecto-sp13_S_contig9684.21317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bp
LSPQRSTHLLLLSWPRWFDWIFRFIRPLLSESTKSKMTSCTANSVYETLL
SKIDNDQIPKEYGGASEYALGEHPYEASLSLHTMLFVDMRNGALRVLEEK
GIDMEPVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036865CRAL-TRIO_dom_sf
IPR001251CRAL-TRIO_dom