prot_Ecto-sp13_S_contig9660.21290.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9660.21290.1
Unique Nameprot_Ecto-sp13_S_contig9660.21290.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length693
Homology
BLAST of mRNA_Ecto-sp13_S_contig9660.21290.1 vs. uniprot
Match: A0A6H5LRF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRF5_9PHAE)

HSP 1 Score: 1040 bits (2690), Expect = 0.000e+0
Identity = 585/702 (83.33%), Postives = 607/702 (86.47%), Query Frame = 0
Query:    1 MEPSCHLLDRPSDAYPGAVKTIGGTVPDILQDSSWCAGDEHCVVPPATEAGNKEEAVRGXXXXXXXXXXXXXXXXXXXXXXXXXXEAAVCRGELSIPGDAGRVPDDEARALSSREGPPRHDGRFTTIAADSLADFTAAKPKEQQSRLVDGYATIATTAYPQPRPPTTTEHSSLPTAARPNVAAKRPPQQEQRGPLVKGKGANTNTRDRDTGGVEHPGATPVVHGDKRTGASDEGVRAEEPTPGRWNGHANVGHTGGSKKKGRSERELSAGTGRGGSGSEKWGGEGGVLEASTVGSKAWPSWRTFACILLLSALVLGTFLRGDMPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPADDSDLPGLISDSEEGEDSTADQGVVPGDGDGETPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGASAXXXXXXXXXKGCGCSSESSSPRGARAPAAVSSKAIAVGGVARGKQLPPDEWPEWLAARRATVAAAVAEVEAGKE---------AAEAATTEEDAITTAPVAVEGREVNDGREVQRHGDSERTATATEARPAAASGGKAVVGVGQAVDPHHQQQPLGNASRTRPAAIGLQFEDGCVN-GGGGNSSTEGPRPLGRDDGDALSFVGGGXGSAGSCCPSEDNSIDVRAGDFSARRASLSAEQPPAMTAGYRVS 692
            +EPSC+LLDRPSDAYPG VKTIGGTVP ILQDSSWCAGDE CVVPPAT AG        XXXXXXXXXXXXXXXXXXXXXXXXX EAA C GE SI GDAGRVPD EARALS  EGPPR DGRFTT AA SLADFT  +PKEQQSRLVDGYATIAT AYPQ RPPTTTE SSLP AARP VAA+RPPQQEQRGPLVKG+GAN NTRDRDTGGV+HPGAT VVHG++RTGASDEG RAEEPTPGRWN +ANVG TGGSK++GR E ELSAGTG  G  SE  GGEGG LE   VG K+WPSWRTFACILLLSAL L TFLRG MPHWLPFFGG RRQRWA DLDSAIAHARSRAGSFCSGRASVFSGDP DDSDLPGLISDSEEGED    QGVVPGD DGE PLMWDRRPKPDDYL+FHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGA A       X KGCGCSS+SSSPRGARAPAA+SSKA AVGGV +GKQLPPDEWPEWLAARRAT AAAVA+VEAGK+         AAEA  TE DAITTAP AV+GREVNDGREVQR GD+ERTATATEARPAAASGGK VVGVGQ VDPHHQQQ LGNASRTRPAAIGLQFEDGCVN GGGG+SSTEGPRPLG D GDALSFVGGG GSAGS CPSEDN+IDVRAGDFSARR SLSAEQPPAMTAGYRVS
Sbjct:  135 LEPSCNLLDRPSDAYPGVVKTIGGTVPGILQDSSWCAGDEDCVVPPATGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAAACLGEPSISGDAGRVPDVEARALSGGEGPPRRDGRFTTTAAASLADFTTTEPKEQQSRLVDGYATIATAAYPQSRPPTTTEQSSLP-AARPTVAAERPPQQEQRGPLVKGQGANINTRDRDTGGVKHPGATAVVHGERRTGASDEGARAEEPTPGRWNRNANVGPTGGSKEQGRREIELSAGTGGRGRRSENRGGEGGGLETGIVGGKSWPSWRTFACILLLSALGLSTFLRGSMPHWLPFFGGGRRQRWAKDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPGLISDSEEGEDGNDTQGVVPGDDDGEAPLMWDRRPKPDDYLIFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGARAGGTNGGTXGKGCGCSSKSSSPRGARAPAAMSSKATAVGGVVKGKQLPPDEWPEWLAARRATAAAAVADVEAGKKGVGAATIRPAAEAVPTEADAITTAPAAVQGREVNDGREVQRRGDNERTATATEARPAAASGGKTVVGVGQTVDPHHQQQALGNASRTRPAAIGLQFEDGCVNDGGGGDSSTEGPRPLGSDGGDALSFVGGGGGSAGSYCPSEDNNIDVRAGDFSARRVSLSAEQPPAMTAGYRVS 835          
BLAST of mRNA_Ecto-sp13_S_contig9660.21290.1 vs. uniprot
Match: D8LDJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ6_ECTSI)

HSP 1 Score: 763 bits (1971), Expect = 1.570e-268
Identity = 409/510 (80.20%), Postives = 421/510 (82.55%), Query Frame = 0
Query:    1 MEPSCHLLDRPSDAYPGAVKTIGGTVPDILQDSSWCAGDEHCVVPPATEAGNKEEAVRGXXXXXXXXXXXXXXXXXXXXXXXXXX-EAAVCRGELSIPGDAGRVPDDEARALSSREGPPRHDGRFTTIAADSLADFTAAKPKEQQSRLVDGYATIATTAYPQPRPPTTTEHSSLPTAARPNVAAKRPPQQEQRGPLVKGKGANTNTRDRDTGGVEHPGATPVVHGDKRTGASDEGVRAEEPTPGRWNGHANVGHTGGSKKKGRSERELSAGTGRGGSGSEKWGGEGGVLEASTVGSKAWPSWRTFACILLLSALVLGTFLRGDMPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPADDSDLPGLISDSEEGEDSTADQGVVPGDGDGETPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGASAXXXXXXXXXKGCGCSSESSSPRGARAPAAVSSKAIAVGGVARGKQLPPDEWPEWLA 509
            +EPSCHL DR SDAYPGAVKTIGGTVPDILQDSSWCAG E CV+PPAT AGNK+EAVRG                 XXXXXXXXX EAA CRGE SIPGDAGRVPDDEARA SS EGPPR DGRFTT AA SLADFT A PKEQQSRLVDGYATIAT AYPQ RPP+TTE SSLPT ARP VA +RPPQQEQRGPLVKG+GANTNTRDRDTGGV+HPGAT VVHGD RTGA+DEG RAEEPTPGRWN HA VG TGGSK KGR EREL A                GVLE + VG KAWPSWR FACILLLSALVLGTFLRG +PHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDP DDSDLP LISDSEEGED   DQGVVPGD DGETPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGA           KGCGCSS+SSSPR A APAAVSSKAIAV GV +GKQLPPDEWPEWLA
Sbjct:  136 LEPSCHLSDRSSDAYPGAVKTIGGTVPDILQDSSWCAGGEDCVLPPATGAGNKKEAVRGGGVGGSQEGTGSCIDAAXXXXXXXXXXEAAACRGESSIPGDAGRVPDDEARASSSGEGPPRRDGRFTTTAAASLADFTTAGPKEQQSRLVDGYATIATAAYPQSRPPSTTEQSSLPTEARPTVATERPPQQEQRGPLVKGQGANTNTRDRDTGGVKHPGATAVVHGDGRTGATDEGARAEEPTPGRWNRHAKVGPTGGSKGKGRRERELPAXXXXXXXXXXXXXXXXGVLETAIVGGKAWPSWRAFACILLLSALVLGTFLRGSIPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPDLISDSEEGEDGNGDQGVVPGDDDGETPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGARVGGTNGGTGGKGCGCSSKSSSPRSALAPAAVSSKAIAVAGVVKGKQLPPDEWPEWLA 645          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9660.21290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LRF5_9PHAE0.000e+083.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDJ6_ECTSI1.570e-26880.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..300
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 320..692
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 301..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9660contigEcto-sp13_S_contig9660:114..2656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9660.21290.1mRNA_Ecto-sp13_S_contig9660.21290.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9660 6..2686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9660.21290.1 ID=prot_Ecto-sp13_S_contig9660.21290.1|Name=mRNA_Ecto-sp13_S_contig9660.21290.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=693bp
MEPSCHLLDRPSDAYPGAVKTIGGTVPDILQDSSWCAGDEHCVVPPATEA
GNKEEAVRGGGVGGSREGTSSCIAAAGAAGGGNGGEAAVCRGELSIPGDA
GRVPDDEARALSSREGPPRHDGRFTTIAADSLADFTAAKPKEQQSRLVDG
YATIATTAYPQPRPPTTTEHSSLPTAARPNVAAKRPPQQEQRGPLVKGKG
ANTNTRDRDTGGVEHPGATPVVHGDKRTGASDEGVRAEEPTPGRWNGHAN
VGHTGGSKKKGRSERELSAGTGRGGSGSEKWGGEGGVLEASTVGSKAWPS
WRTFACILLLSALVLGTFLRGDMPHWLPFFGGDRRQRWAIDLDSAIAHAR
SRAGSFCSGRASVFSGDPADDSDLPGLISDSEEGEDSTADQGVVPGDGDG
ETPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAG
ASAGGTNGGTGGKGCGCSSESSSPRGARAPAAVSSKAIAVGGVARGKQLP
PDEWPEWLAARRATVAAAVAEVEAGKEAAEAATTEEDAITTAPVAVEGRE
VNDGREVQRHGDSERTATATEARPAAASGGKAVVGVGQAVDPHHQQQPLG
NASRTRPAAIGLQFEDGCVNGGGGNSSTEGPRPLGRDDGDALSFVGGGGG
SAGSCCPSEDNSIDVRAGDFSARRASLSAEQPPAMTAGYRVS*
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