prot_Ecto-sp13_S_contig965.21279.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig965.21279.1
Unique Nameprot_Ecto-sp13_S_contig965.21279.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
BLAST of mRNA_Ecto-sp13_S_contig965.21279.1 vs. uniprot
Match: D8LHD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD0_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 4.290e-30
Identity = 120/195 (61.54%), Postives = 124/195 (63.59%), Query Frame = 0
Query:   15 SFPALHITSAALRHQLHRKLGGMGG-APEDLASTAAGSSGV--GHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDGPDLQYTSPLGLTCGVLRPTPQERFVVGGNXXXXXXXXXXXXXXXGATRIRERRSPSNSMTGTTLFSQQGEDGNRGGSGWGPFSSTAPDSFLQQGSGGGCGDVDGSMSFTGNDSGGE 206
            S PALH  S   RHQLHRK GGMGG APEDL+STAAG +GV  G QGXXXXXXXXXXXXXXXXXXXXXXXXXX  L D P LQY SP   T GVLRPTPQE FVV G                GATRIR  RS S++M G T  SQQGEDGN GG   G      P   LQQGSG     VDG M   GN SG E
Sbjct:   32 SSPALHDASTTQRHQLHRKRGGMGGGAPEDLSSTAAGGTGVSLGRQGXXXXXXXXXXXXXXXXXXXXXXXXXX--LPDDPGLQYRSPAVSTNGVLRPTPQEHFVVDGRGGGNSSSSS------GATRIRGCRSASSAMAGMTSSSQQGEDGNGGGHRLGSVLLDTPGHSLQQGSGXXXXXVDGGMGLMGNSSGDE 218          
BLAST of mRNA_Ecto-sp13_S_contig965.21279.1 vs. uniprot
Match: A0A6H5KJQ4_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ4_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 4.380e-23
Identity = 130/209 (62.20%), Postives = 138/209 (66.03%), Query Frame = 0
Query:    1 MWAFYRNESDRRALSFPALHITSAALRHQLHRKLGGMGGAPEDLASTAAGSSGVGHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDGPDLQYTS-PLGLTCGVLRPTPQERFVVGGNXXXXXXXXXXXXXXX-----------GATRIRERRSPSNSMTGTT---LFSQQGEDGNRGGSGWGPFSSTAPDSFLQQGSGGGCGDVDG 194
            MWAFYRNESD+ A    ALH  SA+LRHQLHRKLGGMGG  ED +S            XXXXXXXXXXXXXXXXXXXXXXXXXXXXLLD PDLQY+S P+  T GVLRPTPQE F+V G+   XXXXXXXXXXXX           GATRIR RRS SN M GT         GED N  GS     SS+AP S    GSG G GDVDG
Sbjct:    1 MWAFYRNESDQCAAKLSALHDASASLRHQLHRKLGGMGGVREDFSSAXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDDPDLQYSSSPVVSTGGVLRPTPQEHFLVAGSGAGXXXXXXXXXXXXXXXXXXXXXXXGATRIRGRRSSSNGMGGTAPXXXXXXXGEDENGWGSXXXXMSSSAP-SGPSVGSGVG-GDVDG 201          
BLAST of mRNA_Ecto-sp13_S_contig965.21279.1 vs. uniprot
Match: D8LHJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ2_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.130e-20
Identity = 67/113 (59.29%), Postives = 74/113 (65.49%), Query Frame = 0
Query:    1 MWAFYRNESDRRALSFPALHITSAALRHQLHRKLGGMGGAPEDLASTAA-GSSGVGHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDGPDLQYTS-PLGLTCGVLRPTPQ 111
            MWAFYRNESD+ A    ALH  SA+LRHQLHRKLGGMGG PED +S AA G SGVG++GXXXXXX                      LLD PDLQY+S P+  T GVLRPTPQ
Sbjct:  159 MWAFYRNESDQCAAKLSALHDASASLRHQLHRKLGGMGGVPEDFSSAAAAGGSGVGYEGXXXXXXAVGDGPGGTAATTAS-------LLDDPDLQYSSSPVVSTGGVLRPTPQ 264          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig965.21279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHD0_ECTSI4.290e-3061.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJQ4_9PHAE4.380e-2362.20EXS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LHJ2_ECTSI1.130e-2059.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig965contigEcto-sp13_S_contig965:14036..15030 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig965.21279.1mRNA_Ecto-sp13_S_contig965.21279.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig965 13982..15700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig965.21279.1 ID=prot_Ecto-sp13_S_contig965.21279.1|Name=mRNA_Ecto-sp13_S_contig965.21279.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
MWAFYRNESDRRALSFPALHITSAALRHQLHRKLGGMGGAPEDLASTAAG
SSGVGHQGGGGGNKTSSSGGGGGDGPGVTTTTTTTTLLDGPDLQYTSPLG
LTCGVLRPTPQERFVVGGNGGGGSSSGGSGSSSSGATRIRERRSPSNSMT
GTTLFSQQGEDGNRGGSGWGPFSSTAPDSFLQQGSGGGCGDVDGSMSFTG
NDSGGEA*
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