prot_Ecto-sp13_S_contig964.21267.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig964.21267.1
Unique Nameprot_Ecto-sp13_S_contig964.21267.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length145
Homology
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: D7FXM0_ECTSI (Histone domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM0_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 1.020e-87
Identity = 142/144 (98.61%), Postives = 142/144 (98.61%), Query Frame = 0
Query:    1 MARLKHTKNKAVGGSKPTKSPRKTLASRQGGGGSGDGGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
            MARLKHTKNKAVGGSK TKSPRKTLASRQGGGGS DGGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE
Sbjct:    1 MARLKHTKNKAVGGSKSTKSPRKTLASRQGGGGSADGGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144          
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: A0A836C8D2_9STRA (Histone-fold-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D2_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.190e-45
Identity = 96/147 (65.31%), Postives = 112/147 (76.19%), Query Frame = 0
Query:    1 MARLKHT---KNKAVGGSKPTKSPRKTLASRQGGGGSGDGGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
            MAR K T   K+  +GG K +   +KT A  Q  GG+ +  +PRKRR  +PGE+ALKEIRAYQR+TELL+RKLPFARLVKEVQ + TP G  YRW A A+LALQEAAEAHLV LFEDANL  +HAKRVTIM +D QLARRIRG+ RE
Sbjct:    1 MARSKSTPFRKSPMIGGPK-SPGAKKTAARAQAKGGA-EQLKPRKRR-HKPGEKALKEIRAYQRSTELLIRKLPFARLVKEVQTSFTPGGLQYRWAATAVLALQEAAEAHLVGLFEDANLACIHAKRVTIMPKDMQLARRIRGRLRE 144          
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: A0A7S3M2P3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2P3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.290e-43
Identity = 88/148 (59.46%), Postives = 109/148 (73.65%), Query Frame = 0
Query:    1 MARLKHTKNKAVGGSKPT----KSPRKTLASRQGGGGSGDGGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
            M R K   N  +GGS+P+    KSP+K+  S      +    +   ++R+RPGERALKEIR YQR+T+LL+R+LPFARLV+EVQ ++    K YRWQA A+LALQEAAEAHL SLFEDANLCA+H KRVT+M +DFQLARRIRG  RE
Sbjct:    1 MVRTKE--NVVIGGSRPSARKSKSPKKSTLS------ATAAVQRTNKKRYRPGERALKEIRYYQRSTDLLIRRLPFARLVREVQVSIVSNKKEYRWQADAILALQEAAEAHLSSLFEDANLCAIHGKRVTVMPKDFQLARRIRGPMRE 140          
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: W7TL17_9STRA (Histone h3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL17_9STRA)

HSP 1 Score: 150 bits (378), Expect = 7.800e-43
Identity = 96/154 (62.34%), Postives = 111/154 (72.08%), Query Frame = 0
Query:    1 MARLKHTKNKA----VGG--SKPTKSPRKTLASRQGGGGS----GDGGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
            MAR+K  K       VGG  + P K PRK  +  +GG G+      G E  K+RR RPG RAL+EIR YQRTTELLLR+LPFARLV+EVQ  ++   K YRWQA +LLALQEAAEAHLV LFEDANLCA+HAKRVTIM +D QLARRIRG  R+
Sbjct:    1 MARMKTAKGTLGRGIVGGKGTSPRKVPRKQASPARGGAGAERGKDKGDEEPKKRRARPGMRALREIRQYQRTTELLLRRLPFARLVREVQGEIST--KQYRWQANSLLALQEAAEAHLVHLFEDANLCAIHAKRVTIMPKDMQLARRIRGPLRD 152          
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: A0A836CIP5_9STRA (Histone H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP5_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.780e-42
Identity = 78/103 (75.73%), Postives = 87/103 (84.47%), Query Frame = 0
Query:   42 KRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
            ++RR +PGE+ALKEIR YQR+TELL+RKLPFARLV+EVQE  TP G  YRW A ALLALQ AAEAHLV LFEDANL A+HAKRVTI  RD QLARRIRG+ RE
Sbjct:   21 RQRRHKPGEKALKEIRTYQRSTELLIRKLPFARLVREVQEMFTPRGVLYRWAADALLALQHAAEAHLVGLFEDANLAAIHAKRVTIQPRDMQLARRIRGRMRE 123          
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: A0A7S3JND5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JND5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.930e-41
Identity = 75/103 (72.82%), Postives = 90/103 (87.38%), Query Frame = 0
Query:   42 KRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
            K+ R RPG RALKEIR YQR+T+LLLRKLPFARLV+E+Q++     +  RWQA A++ALQEAAEAHLV+LF+DANLCA+HAKRVT+MVRD QLARRIRGQ+RE
Sbjct:   21 KKHRLRPGMRALKEIRKYQRSTDLLLRKLPFARLVREIQQSFVQ--RDLRWQAEAIIALQEAAEAHLVALFQDANLCAIHAKRVTLMVRDLQLARRIRGQARE 121          
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: A0A7S2BDC5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDC5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.990e-41
Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 0
Query:   44 RRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
            RR RPGERALKEIR YQR+T+LL+RKLPFARLV+EV    T   K YRWQA+ALLALQE+AEAHLV LFEDANLC +H+KRVT+MV+D QLARRIRG  RE
Sbjct:    1 RRHRPGERALKEIRTYQRSTDLLIRKLPFARLVREVMLQFT--NKEYRWQASALLALQESAEAHLVHLFEDANLCTIHSKRVTVMVKDIQLARRIRGPMRE 99          
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: K8YX25_NANGC (Histone H3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YX25_NANGC)

HSP 1 Score: 143 bits (360), Expect = 2.550e-41
Identity = 92/147 (62.59%), Postives = 104/147 (70.75%), Query Frame = 0
Query:    1 MARLKHTKN---KAVGGSKPTKSPRKTLASRQGGGGSGDGGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
            MAR+K  K    + + G K T SPRK               E  K+RR RPG RAL+EIR YQRTTELLLR+LPFARLV+EVQ  ++   K YRWQA +LLALQEAAEAHLV LFEDANLCA+HAKRVTIM +D QLARRIRG  RE
Sbjct:    1 MARMKTAKGTLGRGIVGGKGT-SPRKD--------------EEPKKRRARPGMRALREIRQYQRTTELLLRRLPFARLVREVQGEIST--KQYRWQANSLLALQEAAEAHLVHLFEDANLCAIHAKRVTIMPKDMQLARRIRGPLRE 130          
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: A0A7S4EEK9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEK9_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.110e-41
Identity = 75/104 (72.12%), Postives = 92/104 (88.46%), Query Frame = 0
Query:   41 RKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
            R++RR RPGERALKEIR YQ +T+LL+R+LPFARLV+E+Q+ L+   ++Y WQA+A+LALQEAAEAHLV LFED NLCA+HAKRVTIM +D QLARRIRGQ+RE
Sbjct:   47 RRKRRMRPGERALKEIRQYQNSTDLLIRRLPFARLVREIQQGLSR--RAYSWQASAILALQEAAEAHLVGLFEDCNLCAVHAKRVTIMPKDMQLARRIRGQTRE 148          
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Match: A0A8K1FGE4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGE4_PYTOL)

HSP 1 Score: 142 bits (359), Expect = 8.230e-41
Identity = 76/99 (76.77%), Postives = 87/99 (87.88%), Query Frame = 0
Query:   43 RRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQ 141
            +RR+RPG  AL+EIR YQR+TELLLRKLPFARLV+E+Q   TP  + YRWQA ALLALQEAAEAHLV LFEDANLCA+HAKRVT+MV+D QLARRIRG+
Sbjct:   57 KRRYRPGTVALREIRFYQRSTELLLRKLPFARLVREIQMEFTP--REYRWQAEALLALQEAAEAHLVRLFEDANLCAIHAKRVTLMVKDIQLARRIRGR 153          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig964.21267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXM0_ECTSI1.020e-8798.61Histone domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836C8D2_9STRA2.190e-4565.31Histone-fold-containing protein n=1 Tax=Tribonema ... [more]
A0A7S3M2P3_9STRA1.290e-4359.46Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W7TL17_9STRA7.800e-4362.34Histone h3 n=2 Tax=Monodopsidaceae TaxID=425072 Re... [more]
A0A836CIP5_9STRA1.780e-4275.73Histone H3 n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S3JND5_9STRA1.930e-4172.82Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2BDC5_9STRA1.990e-4175.25Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K8YX25_NANGC2.550e-4162.59Histone H3 n=1 Tax=Nannochloropsis gaditana (strai... [more]
A0A7S4EEK9_9STRA3.110e-4172.12Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A8K1FGE4_PYTOL8.230e-4176.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 105..121
score: 75.83
coord: 121..142
score: 74.01
coord: 3..17
score: 45.36
coord: 38..59
score: 53.66
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 38..143
e-value: 3.8E-55
score: 199.2
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 71..79
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 7..139
e-value: 1.4E-41
score: 141.9
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..142
e-value: 5.5E-53
score: 180.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 15..140
NoneNo IPR availablePANTHERPTHR45810FAMILY NOT NAMEDcoord: 1..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig964contigEcto-sp13_S_contig964:6642..11083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig964.21267.1mRNA_Ecto-sp13_S_contig964.21267.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig964 6582..11196 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig964.21267.1 ID=prot_Ecto-sp13_S_contig964.21267.1|Name=mRNA_Ecto-sp13_S_contig964.21267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
MARLKHTKNKAVGGSKPTKSPRKTLASRQGGGGSGDGGEPRKRRRFRPGE
RALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLAL
QEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold