prot_Ecto-sp13_S_contig9618.21242.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9618.21242.1
Unique Nameprot_Ecto-sp13_S_contig9618.21242.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length361
Homology
BLAST of mRNA_Ecto-sp13_S_contig9618.21242.1 vs. uniprot
Match: A0A6H5K6H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H5_9PHAE)

HSP 1 Score: 525 bits (1352), Expect = 1.450e-183
Identity = 313/384 (81.51%), Postives = 322/384 (83.85%), Query Frame = 0
Query:    3 PKKITVFRSARGTDFRPALALGTADSGNXXXXXXXXXXXXXXXK----------STIKAVEGEGPCGGGETLHTTVVSGNDELGGEAKSSPSIMELFDTNDVVAAAREQAAARDSNKTATAA------ADVAPEASPAAAMARRDSLGRGRSKRFSTDSLRPSSGAWDRRNGLPAHRKTASFTGGVPRAGRGSGGSVGGAERHGYLSFSEVQVDEEDDTDDYLGHXXXXXXXXXXXKFGREMPHRRRKKRERAWKLFLAVMQEHGLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQVRCLAINPV----------CLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSHDSSVGGTGSHEASGPRLPGIPAA 360
            P++ +  RS RGTD RPALALGT DSGNXXXXXXXXXXXXXXX           STI AVEGEGPCGGGETLHTTVVSGNDELGGEAKSSPSIMELFDTNDVVAAAREQAAAR                D APEASPAAAMARR SLG+GRSKRF TDSLRPSSG WD RNGLPAH+K ASF+GGVPRAGR SGGSVGGAERHGYLSFSEVQVDEEDDTDD LGHXXXXXXXXXXX FGREMPHRRRKKRERAWKLFLAVMQEHGLRVRKYHRHGKGWAHRIVKYDP LPGLRWKSSKWWDSGGGQ+    +  V          CLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVS+DSSVG TG HEASGPRLPGIPAA
Sbjct:   80 PRRESCSRSGRGTDCRPALALGTVDSGNXXXXXXXXXXXXXXXXXXXXXXXXXXSTITAVEGEGPCGGGETLHTTVVSGNDELGGEAKSSPSIMELFDTNDVVAAAREQAAARXXXXXXXXXXXXXXXTDGAPEASPAAAMARRHSLGQGRSKRFPTDSLRPSSGVWDHRNGLPAHKKAASFSGGVPRAGRESGGSVGGAERHGYLSFSEVQVDEEDDTDDRLGHXXXXXXXXXXXXFGREMPHRRRKKRERAWKLFLAVMQEHGLRVRKYHRHGKGWAHRIVKYDPNLPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSYDSSVGATGGHEASGPRLPGIPAA 463          
BLAST of mRNA_Ecto-sp13_S_contig9618.21242.1 vs. uniprot
Match: D7FS79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS79_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 3.160e-109
Identity = 188/288 (65.28%), Postives = 195/288 (67.71%), Query Frame = 0
Query:   86 MELFDTNDVVAAAREQAAARDSNKTATAAADVAP---EASPAAAMARRDSLGRGRSKRFSTDSLRPSSGAWDRRNGLPAHRKTASFTGGVPRAGRGSGGSVGGAERHGYLSFSEVQVDEEDDTDDYLGHXXXXXXXXXXXKFGREMPHRRRKKRERAWKLFLAVMQEHGLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQVRCLAINPV----------CLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSHDSSVGGTGSHEASGPRLPGIPAA 360
            MELFDTNDVVAAAREQ                     EASPAAAMARR SLGRGRSKR+STDSLRPSSGAWD RNGLPAH+K ASF+GGVPRAGRGSGGSVGGAERHGYLSFSEVQ                                                  EHGLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQ+    +  V          CLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVS++SSVGGTG H ASGPRL GIPAA
Sbjct:    1 MELFDTNDVVAAAREQXXXXXXXXXXXXXXXXXXXXXEASPAAAMARRHSLGRGRSKRYSTDSLRPSSGAWDHRNGLPAHKKAASFSGGVPRAGRGSGGSVGGAERHGYLSFSEVQ--------------------------------------------------EHGLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSNNSSVGGTGGHGASGPRLSGIPAA 238          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9618.21242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K6H5_9PHAE1.450e-18381.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS79_ECTSI3.160e-10965.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9618contigEcto-sp13_S_contig9618:2704..4511 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9618.21242.1mRNA_Ecto-sp13_S_contig9618.21242.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9618 2704..4511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9618.21242.1 ID=prot_Ecto-sp13_S_contig9618.21242.1|Name=mRNA_Ecto-sp13_S_contig9618.21242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=361bp
LLPKKITVFRSARGTDFRPALALGTADSGNNNNNNNNNNSSINNNKSTIK
AVEGEGPCGGGETLHTTVVSGNDELGGEAKSSPSIMELFDTNDVVAAARE
QAAARDSNKTATAAADVAPEASPAAAMARRDSLGRGRSKRFSTDSLRPSS
GAWDRRNGLPAHRKTASFTGGVPRAGRGSGGSVGGAERHGYLSFSEVQVD
EEDDTDDYLGHNSSSTASSSSSKFGREMPHRRRKKRERAWKLFLAVMQEH
GLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQVRCLAINP
VCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSHDSSVGGTGSHEAS
GPRLPGIPAA*
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