prot_Ecto-sp13_S_contig96159.21237.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96159.21237.1
Unique Nameprot_Ecto-sp13_S_contig96159.21237.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
BLAST of mRNA_Ecto-sp13_S_contig96159.21237.1 vs. uniprot
Match: D7FY39_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY39_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 5.500e-21
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0
Query:    1 METPRDEVQKACVLGSGAFGTALAQLMARKGVPTTAWTRSQDVTDLIT 48
            METPRDE QKACVLGSGAFGTALAQLMARKGVPTTAWTRSQDVTDLIT
Sbjct:    1 METPRDEAQKACVLGSGAFGTALAQLMARKGVPTTAWTRSQDVTDLIT 48          
BLAST of mRNA_Ecto-sp13_S_contig96159.21237.1 vs. uniprot
Match: A0A836CAJ5_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ5_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 4.950e-8
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    8 VQKACVLGSGAFGTALAQLMARKGVPTTAWTRSQDVTDLI 47
            +QKAC+LG+GAFGTALAQL+AR GV  T WTRS+D   +I
Sbjct:   33 LQKACILGAGAFGTALAQLLARNGVAATVWTRSEDTMAMI 72          
BLAST of mRNA_Ecto-sp13_S_contig96159.21237.1 vs. uniprot
Match: UPI0003B53B7F (NAD(P)-dependent glycerol-3-phosphate dehydrogenase n=1 Tax=Paucidesulfovibrio longus TaxID=889 RepID=UPI0003B53B7F)

HSP 1 Score: 53.5 bits (127), Expect = 1.660e-5
Identity = 30/77 (38.96%), Postives = 42/77 (54.55%), Query Frame = 0
Query:    1 METPRDEVQKACVLGSGAFGTALAQLMARKGVPTTAWTRSQDVTDLITRF---EVFSVGFALTPCTTKLPTRAAALQ 74
            M T     ++  VLG+GA+GT LA ++AR GVPTT W R  D+ + +      +VF  G AL+P        A AL+
Sbjct:    1 MNTENSTAKRVTVLGAGAWGTTLADMLARNGVPTTLWVRETDLAERMRAELVNDVFLPGVALSPALNVESDPATALR 77          
BLAST of mRNA_Ecto-sp13_S_contig96159.21237.1 vs. uniprot
Match: A0A2V7KM91_9BACT (NAD_Gly3P_dh_N domain-containing protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7KM91_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 1.720e-5
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0
Query:   10 KACVLGSGAFGTALAQLMARKGVPTTAWTRSQDVTDLITRF---EVFSVGFALTP 61
            K  V+G GA+GTALA L+ARKG   T W R  DV D + R    E+F  G +L P
Sbjct:    2 KIAVIGGGAWGTALADLLARKGEQVTMWAREPDVVDSVNRRHVNEMFLPGASLAP 56          
BLAST of mRNA_Ecto-sp13_S_contig96159.21237.1 vs. uniprot
Match: A0A2V7R3J2_9BACT (Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7R3J2_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 4.170e-5
Identity = 30/68 (44.12%), Postives = 39/68 (57.35%), Query Frame = 0
Query:   10 KACVLGSGAFGTALAQLMARKGVPTTAWTRSQDVTDLITRF---EVFSVGFALTPCTTKLPTRAAALQ 74
            K  V+G GA+GTALA L+ARKG   T W R  +V D + R    E+F  G +L P  T     AAA++
Sbjct:    2 KVAVVGGGAWGTALADLLARKGEQVTIWAREAEVVDSVNRRHVNEMFLPGASLAPALTAEGDLAAAIR 69          
BLAST of mRNA_Ecto-sp13_S_contig96159.21237.1 vs. uniprot
Match: G9PMM3_9ACTO (Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=4 Tax=Actinomyces TaxID=1654 RepID=G9PMM3_9ACTO)

HSP 1 Score: 51.6 bits (122), Expect = 7.870e-5
Identity = 29/69 (42.03%), Postives = 39/69 (56.52%), Query Frame = 0
Query:    8 VQKACVLGSGAFGTALAQLMARKGVPTTAWTRSQDVTDLITRF--EVFSVGFALTPCTTKLPTRAAALQ 74
            V++A V+GSGA+GT  A L+A+ G PTT W R Q++ D I     E +  G  L P  T     A A+Q
Sbjct:   13 VRRAAVIGSGAWGTTFASLLAQAGAPTTIWARRQEIADEINTGTNERYVPGHRLPPGVTATTDLAGAVQ 81          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96159.21237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FY39_ECTSI5.500e-2197.92Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Ta... [more]
A0A836CAJ5_9STRA4.950e-867.50Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Ta... [more]
UPI0003B53B7F1.660e-538.96NAD(P)-dependent glycerol-3-phosphate dehydrogenas... [more]
A0A2V7KM91_9BACT1.720e-549.09NAD_Gly3P_dh_N domain-containing protein (Fragment... [more]
A0A2V7R3J2_9BACT4.170e-544.12Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 T... [more]
G9PMM3_9ACTO7.870e-542.03Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=4 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 2..57
e-value: 9.8E-10
score: 40.1
IPR011128Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminalPFAMPF01210NAD_Gly3P_dh_Ncoord: 11..48
e-value: 1.4E-7
score: 31.6
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 9..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96159contigEcto-sp13_S_contig96159:25..468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96159.21237.1mRNA_Ecto-sp13_S_contig96159.21237.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96159 10..468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96159.21237.1 ID=prot_Ecto-sp13_S_contig96159.21237.1|Name=mRNA_Ecto-sp13_S_contig96159.21237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
METPRDEVQKACVLGSGAFGTALAQLMARKGVPTTAWTRSQDVTDLITRF
EVFSVGFALTPCTTKLPTRAAALQRSIGRCLMQKVHTLHDLDVLYACSMT
MMAVVCKCKETTAPTQQCLFSWIMHTSSRKVHRTESLRIVGAVVYLPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011128G3P_DH_NAD-dep_N
IPR036291NAD(P)-bd_dom_sf