prot_Ecto-sp13_S_contig96135.21232.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96135.21232.1
Unique Nameprot_Ecto-sp13_S_contig96135.21232.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: E6ZER6_ECTSI (Ribosomal protein L16 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZER6_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 4.050e-83
Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFAL+ATES FLNGKQLEAARQNIRRKVKREGKLEISVFPDIA SQK SAARMGKGKGKV+HWIAALSAGKTIFLLYGVEAEQGIPALQ+GANKLP+KSKIYQL
Sbjct:    4 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALIATESGFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAASQKASAARMGKGKGKVNHWIAALSAGKTIFLLYGVEAEQGIPALQSGANKLPVKSKIYQL 137          
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: A0A1I9LW99_9PHAE (Ribosomal protein L16 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW99_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 5.690e-74
Identity = 110/134 (82.09%), Postives = 127/134 (94.78%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFK R++PNNSTKTHKL+ LNCFALVA ES+FLNGKQ+EAARQNIRRKV R+GKLEI +FPDIA+S+K +AARMGKGKGKVDHW+A+LSAG+T+FLLYG++AEQGIPALQAGANKLP+K KIYQL
Sbjct:    4 QPKKTKYRKYFKPRQMPNNSTKTHKLQDLNCFALVAMESSFLNGKQIEAARQNIRRKVNRKGKLEIIIFPDIAISRKATAARMGKGKGKVDHWVASLSAGQTVFLLYGIDAEQGIPALQAGANKLPMKLKIYQL 137          
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: A0A089N0Z2_PETFA (Ribosomal protein L16 n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A089N0Z2_PETFA)

HSP 1 Score: 216 bits (549), Expect = 3.680e-70
Identity = 109/134 (81.34%), Postives = 123/134 (91.79%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFK R +P +STKT KLK LN FAL+A ES FLNGKQ+EAARQNIRRKVKREGKLEI VFPDIA+S+K SAARMGKGKGKVDHW+AALSAG+T+FLLYGV+AEQGIPAL++GANKLP+K KIY+L
Sbjct:    4 QPKKTKYRKYFKPRGLPKSSTKTQKLKELNYFALIAMESGFLNGKQIEAARQNIRRKVKREGKLEILVFPDIAISRKASAARMGKGKGKVDHWVAALSAGRTVFLLYGVDAEQGIPALRSGANKLPMKLKIYKL 137          
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: A0A8F0K1B0_9PHAE (Ribosomal protein L16 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K1B0_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 7.430e-70
Identity = 104/134 (77.61%), Postives = 123/134 (91.79%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFK R++P+NST+T +L  LNCFAL+ TES +LNG+Q+EAARQNIRRKVKREGKLEI VFPDI +S+K SAARMGKGKGK+DHW+AAL AG+TIFLLYG++AEQGIPALQ+GANKLP+K KIY+L
Sbjct:    4 QPKKTKYRKYFKPRRLPSNSTQTQRLGELNCFALITTESGYLNGRQIEAARQNIRRKVKREGKLEIPVFPDIPISRKASAARMGKGKGKIDHWVAALPAGRTIFLLYGIDAEQGIPALQSGANKLPLKLKIYKL 137          
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: A0A0U1XD57_9PHAE (Ribosomal protein L16 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XD57_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 2.130e-69
Identity = 110/134 (82.09%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFK R+IP NSTKT KLK LN FAL+A ES FL GKQ+EAARQNIRRKVKREGKLEI VFPDIAVS+K SAARMGKGKGKVDHWIA L+AG T+FLLYGVEAE GIPAL++GANKLPIK KI++L
Sbjct:    4 QPKKTKYRKYFKPRRIPKNSTKTQKLKELNYFALIAMESGFLTGKQIEAARQNIRRKVKREGKLEILVFPDIAVSKKASAARMGKGKGKVDHWIATLAAGNTVFLLYGVEAEHGIPALKSGANKLPIKLKIFKL 137          
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: A0A0U2M402_9PHAE (Ribosomal protein L16 n=18 Tax=Laminariales TaxID=2886 RepID=A0A0U2M402_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 2.830e-69
Identity = 104/134 (77.61%), Postives = 121/134 (90.30%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFK R +PN STKTHKL  LNCFA++  ES +LNG+Q+EAARQNIRRKVKREGKLEI +FPDIA+S+K SAARMGKGKGKVDHWIA++SAG+ +FLLYG++AEQGIPAL +GANKLP+K KIYQL
Sbjct:    2 QPKKTKYRKYFKPRGLPNTSTKTHKLTELNCFAVILMESGYLNGRQIEAARQNIRRKVKREGKLEILIFPDIAISRKASAARMGKGKGKVDHWIASVSAGQNLFLLYGIDAEQGIPALHSGANKLPLKVKIYQL 135          
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: A0A4D6E560_9PHAE (Ribosomal protein L16 n=4 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E560_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 4.290e-69
Identity = 104/134 (77.61%), Postives = 122/134 (91.04%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFK R +PN STKTHKL  L CFAL+A ES++LN +Q+EAARQNIRRKVKREGKLEI VFPDIA+S+K SAARMGKGKGKV+HWIA+++AG+T+FLLYG++AEQGIPAL +GANKLP+K KIYQL
Sbjct:    4 QPKKTKYRKYFKPRGLPNTSTKTHKLTELTCFALIAMESSYLNSRQIEAARQNIRRKVKREGKLEILVFPDIAISRKASAARMGKGKGKVNHWIASITAGQTVFLLYGIDAEQGIPALHSGANKLPLKVKIYQL 137          
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: A0A3G5FPM2_9PHAE (Ribosomal protein L16 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPM2_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.750e-68
Identity = 105/134 (78.36%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFK R+ P N  +THKL+ LN FAL+A ES FLNG+Q+EAARQNIRRKVKREGKLEI VFPDIA+S+K SAARMGKGKGKVDHW++++ AGKTIF LYG+EAEQG+PALQ+GANKLPIK KIYQL
Sbjct:    4 QPKKTKYRKYFKPRRGPGNLNQTHKLEELNFFALIAMESGFLNGRQIEAARQNIRRKVKREGKLEIKVFPDIAISRKASAARMGKGKGKVDHWVSSIPAGKTIFTLYGIEAEQGVPALQSGANKLPIKLKIYQL 137          
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: W5RG04_COSCS (Ribosomal protein L16 n=1 Tax=Costaria costata TaxID=2872 RepID=W5RG04_COSCS)

HSP 1 Score: 209 bits (532), Expect = 1.340e-67
Identity = 101/134 (75.37%), Postives = 119/134 (88.81%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFK R +PN STKTHKL  L CFA++  ES ++NG+Q+EAARQNIRRKVKREGKL+IS+FPDIA+S+K SAARMGKGKGKVDHW+ ++SAG+T+F L+GV AEQGIPAL +GANKLPIK KIYQL
Sbjct:    2 QPKKTKYRKYFKPRGLPNTSTKTHKLSELTCFAVITLESGYVNGRQIEAARQNIRRKVKREGKLQISIFPDIAISRKASAARMGKGKGKVDHWVTSISAGQTLFTLFGVSAEQGIPALHSGANKLPIKVKIYQL 135          
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Match: D0IPU3_SACAN (Ribosomal protein L16 n=6 Tax=Laminariales TaxID=2886 RepID=D0IPU3_SACAN)

HSP 1 Score: 208 bits (530), Expect = 2.710e-67
Identity = 102/134 (76.12%), Postives = 119/134 (88.81%), Query Frame = 0
Query:    1 QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAARQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAGKTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL 134
            QPKKTKYRKYFK R +PN S KTHKL  L CFA++A  S +LNG+Q+E+ARQNIRRKVKREGKLEI +FPDIA+S K SAARMGKGKGKVDHWIA++SAG+T+FLLYG++AEQGIPAL +GANKLP+K KIYQL
Sbjct:    2 QPKKTKYRKYFKPRGLPNTSGKTHKLTELTCFAVIAMGSGYLNGRQIESARQNIRRKVKREGKLEILIFPDIAISHKASAARMGKGKGKVDHWIASISAGQTLFLLYGIDAEQGIPALHSGANKLPLKVKIYQL 135          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96135.21232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZER6_ECTSI4.050e-8394.78Ribosomal protein L16 n=2 Tax=Ectocarpus siliculos... [more]
A0A1I9LW99_9PHAE5.690e-7482.09Ribosomal protein L16 n=1 Tax=Pleurocladia lacustr... [more]
A0A089N0Z2_PETFA3.680e-7081.34Ribosomal protein L16 n=4 Tax=Scytosiphonaceae Tax... [more]
A0A8F0K1B0_9PHAE7.430e-7077.61Ribosomal protein L16 n=1 Tax=Analipus japonicus T... [more]
A0A0U1XD57_9PHAE2.130e-6982.09Ribosomal protein L16 n=1 Tax=Colpomenia peregrina... [more]
A0A0U2M402_9PHAE2.830e-6977.61Ribosomal protein L16 n=18 Tax=Laminariales TaxID=... [more]
A0A4D6E560_9PHAE4.290e-6977.61Ribosomal protein L16 n=4 Tax=Laminariaceae TaxID=... [more]
A0A3G5FPM2_9PHAE1.750e-6878.36Ribosomal protein L16 n=1 Tax=Cladosiphon okamuran... [more]
W5RG04_COSCS1.340e-6775.37Ribosomal protein L16 n=1 Tax=Costaria costata Tax... [more]
D0IPU3_SACAN2.710e-6776.12Ribosomal protein L16 n=6 Tax=Laminariales TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000114Ribosomal protein L16PRINTSPR00060RIBOSOMALL16coord: 88..117
score: 28.33
coord: 42..53
score: 37.17
coord: 58..87
score: 48.13
IPR000114Ribosomal protein L16TIGRFAMTIGR01164TIGR01164coord: 1..127
e-value: 1.5E-32
score: 110.4
IPR000114Ribosomal protein L16PANTHERPTHR1222050S/60S RIBOSOMAL PROTEIN L16coord: 1..131
IPR016180Ribosomal protein L10e/L16PFAMPF00252Ribosomal_L16coord: 2..131
e-value: 6.9E-32
score: 110.2
IPR036920Ribosomal protein L10e/L16 superfamilyGENE3D3.90.1170.10coord: 1..134
e-value: 1.2E-35
score: 125.0
IPR036920Ribosomal protein L10e/L16 superfamilySUPERFAMILY54686Ribosomal protein L16p/L10ecoord: 1..132
NoneNo IPR availablePANTHERPTHR12220:SF1339S RIBOSOMAL PROTEIN L16, MITOCHONDRIALcoord: 1..131
IPR020798Ribosomal protein L16, conserved sitePROSITEPS00701RIBOSOMAL_L16_2coord: 82..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96135contigEcto-sp13_S_contig96135:3..407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96135.21232.1mRNA_Ecto-sp13_S_contig96135.21232.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96135 3..407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96135.21232.1 ID=prot_Ecto-sp13_S_contig96135.21232.1|Name=mRNA_Ecto-sp13_S_contig96135.21232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
QPKKTKYRKYFKTRKIPNNSTKTHKLKTLNCFALVATESTFLNGKQLEAA
RQNIRRKVKREGKLEISVFPDIAVSQKPSAARMGKGKGKVDHWIAALSAG
KTIFLLYGVEAEQGIPALQAGANKLPIKSKIYQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000114Ribosomal_L16
IPR016180Ribosomal_L10e/L16
IPR036920Ribosomal_L10e/L16_sf
IPR020798Ribosomal_L16_CS