prot_Ecto-sp13_S_contig96116.21229.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96116.21229.1
Unique Nameprot_Ecto-sp13_S_contig96116.21229.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
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BLAST of mRNA_Ecto-sp13_S_contig96116.21229.1 vs. uniprot
Match: D7FW53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW53_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.650e-25
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0 
Query:    4 EGEKTRQEILNDIIARSKERKLEKARGKEEQESERERLDEGMGELLSMLDQRPAKSQGNAA 64
            +GEKTRQEILNDIIARSKERKLEKARGKEEQESERERLDEGMGELLSMLDQRPAK +GNAA
Sbjct:  168 QGEKTRQEILNDIIARSKERKLEKARGKEEQESERERLDEGMGELLSMLDQRPAKGEGNAA 228
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BLAST of mRNA_Ecto-sp13_S_contig96116.21229.1 vs. uniprot
Match: A0A836CJL6_9STRA (Nucleolar protein 14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJL6_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.340e-7
Identity = 29/59 (49.15%), Postives = 44/59 (74.58%), Query Frame = 0 
Query:    1 GPAEGEKTRQEILNDIIARSKERKLEKARGKEEQESERERLDEGMGELLSMLDQRPAKS 59
            G  +  K+R++I+ +IIA+SK RK +K+R K+EQE  RE+LD   G+LL ML+QRP ++
Sbjct:  174 GRPQDRKSRKDIMEEIIAKSKLRKADKSRSKDEQEETREKLDAEFGDLLGMLEQRPTRA 232
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96116.21229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW53_ECTSI1.650e-2595.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJL6_9STRA2.340e-749.15Nucleolar protein 14 n=1 Tax=Tribonema minus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
IPR007276Nucleolar protein 14PFAMPF04147Nop14coord: 4..61
e-value: 1.6E-13
score: 49.9
IPR007276Nucleolar protein 14PANTHERPTHR23183NOP14coord: 5..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96116contigEcto-sp13_S_contig96116:130..321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96116.21229.1mRNA_Ecto-sp13_S_contig96116.21229.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96116 130..321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96116.21229.1 ID=prot_Ecto-sp13_S_contig96116.21229.1|Name=mRNA_Ecto-sp13_S_contig96116.21229.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
GPAEGEKTRQEILNDIIARSKERKLEKARGKEEQESERERLDEGMGELLS
MLDQRPAKSQGNAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007276Nop14