prot_Ecto-sp13_S_contig960.21216.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig960.21216.1
Unique Nameprot_Ecto-sp13_S_contig960.21216.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length217
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig960.21216.1 vs. uniprot
Match: D7FW37_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW37_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 1.010e-42
Identity = 75/89 (84.27%), Postives = 77/89 (86.52%), Query Frame = 0 
Query:  126 MVHDPTQQFREASVFVNPRRRGGINYAVGSAEAKWAAEAATQPCREDTRACASVDQEAEVGAEMLRMMKMWSFSGGAGARAGQEAPVGK 214
            MVHDP QQF EA VFVNPRRRGGINYA  SAEAKWAA AA QPCREDTR   SVDQEAEVGAEMLRMMKMWSF+GGA A AGQEAPVG+
Sbjct:    1 MVHDPMQQFGEAPVFVNPRRRGGINYAADSAEAKWAAGAAAQPCREDTRGRMSVDQEAEVGAEMLRMMKMWSFNGGAEAHAGQEAPVGQ 89
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig960.21216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW37_ECTSI1.010e-4284.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig960contigEcto-sp13_S_contig960:2144..5236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig960.21216.1mRNA_Ecto-sp13_S_contig960.21216.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig960 568..5503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig960.21216.1 ID=prot_Ecto-sp13_S_contig960.21216.1|Name=mRNA_Ecto-sp13_S_contig960.21216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp
MANYTTFSRNFDMPYLMLFDVRAERGRPTCCQGSYTTGSIILISFLGTAV
VRSEVQHARSIIRGGDWETTQSRGARVVTRLVAPPEDTRGTRESTLKTLG
AQGSFLLTRDTTGSTILLFGRREKIMVHDPTQQFREASVFVNPRRRGGIN
YAVGSAEAKWAAEAATQPCREDTRACASVDQEAEVGAEMLRMMKMWSFSG
GAGARAGQEAPVGKHS*
back to top