prot_Ecto-sp13_S_contig96.21213.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96.21213.1
Unique Nameprot_Ecto-sp13_S_contig96.21213.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1075
Homology
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: D7FR27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR27_ECTSI)

HSP 1 Score: 1134 bits (2934), Expect = 0.000e+0
Identity = 813/1102 (73.77%), Postives = 823/1102 (74.68%), Query Frame = 0
Query:    1 MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGAGALSKALKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGCVLASVDLSATGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKASTSLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDTAGGGSGSGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLSAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVEVGLGAFLRADPVAAASIEETLRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSRQQQGIGKSGARATAVERPKAGLERQKAASGTAERQRRGAGGPRPSXXXXXXXXXXXXXXXXXGLQRTSSKASMRXXXXXXGKSETGQPRQAVVTGQHHKTTAATLAARDRAAAGAHAAPHRRLHQGEELDSIEGFTEPRQSPRSMPPTRELLASQAAAXXXXXXXXXXXXXXXXXXXXXKKAAGPVSSTGVEAAASGRVVESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWDKDSGGPAGSAXXXXXXXXXXXXXXXXXXXXASTMVPSSVGPVSTGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EVAAGMTSLALSDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQ---------------------------NEMNSALRTMRSDMEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAASXXXXXXXXXXXXXXXXALGGAADVVVRLQSPSSASETSAALTKSNRAPDTPEARPLVTWSGGDGYFSSTAGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQRADPRAAEGLGMTPAMWA 1074
            MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGAGAL+KALKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGCVLASVDLSATGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKAS SLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQD AG  SGSGIRDLRLRGNNITHTGAKELATILSE RCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKL+AVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVE                                                                                                                                             GIGKSGAR T +ERPKAGLERQKAA GTAERQ          XXXXXXXXXXXXXXXXX            XXXX  GK ETGQPRQ VV GQHHKTT ATLAARDRAA  AHAAPHRRLHQGEELDSIEGFTE RQ+P+ MPPTRELLAS    XXXXXXXXX       XXXXXKKAAGP  S G+EA+ASG VVESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWD +SGGPAGSA    XXXXXXXXXXXXXXXX   MVPSSVGPVS    XXXXXXXXXXXXXXXX             EVAAGMTSLALSDG                  XXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQ                           NEMNSALRTMRS+MEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAAS   XXXXXXXXX      GGAADVVVRLQSPSSASETSAAL KSNRAPDTPEARPLVTWSGGDG FSS AGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQR DPRAAEGLGM+PAMWA
Sbjct:    1 MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGAGALAKALKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGCVLASVDLSATGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKASASLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDAAG--SGSGIRDLRLRGNNITHTGAKELATILSEGRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLTAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVE---------------------------------------------------------------------------------------------------------------------------------------------GIGKSGARGTGIERPKAGLERQKAAGGTAERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGKPETGQPRQPVVAGQHHKTTTATLAARDRAAVDAHAAPHRRLHQGEELDSIEGFTEQRQAPKLMPPTRELLASXXXXXXXXXXXXXNTGFYGDXXXXXKKAAGPGPSAGLEASASGGVVESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWDTNSGGPAGSAATGKXXXXXXXXXXXXXXXXXXXMVPSSVGPVSXXXXXXXXXXXXXXXXXXXXASFSTAPESSSEPEVAAGMTSLALSDGSRSGLNSSSQGTTAIEVSXXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQRRVPSSVVCAAAKRVRLALLKHLGAWQNEMNSALRTMRSEMEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAASVAAXXXXXXXXX------GGAADVVVRLQSPSSASETSAALNKSNRAPDTPEARPLVTWSGGDGDFSSAAGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQRTDPRAAEGLGMSPAMWA 953          
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: A0A0G4J855_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J855_PLABS)

HSP 1 Score: 62.4 bits (150), Expect = 5.050e-6
Identity = 48/156 (30.77%), Postives = 76/156 (48.72%), Query Frame = 0
Query:  140 SNLLKASTSLHTVLAGGNYLGDRGLAALCGAFCYL-KPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDTAGGGSGSGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGV 294
            + +L ++  L  V+  GN LG  G A +C  F  L +  +++ LD++GN +G  GAQ +   + A+  N+  T+          L +  N +   GA+ +  +L++      LR LD+S N IT DGF  +A  L   R L  L  +G  L   GV
Sbjct:  185 TEVLLSAPQLRKVVLSGNRLGRHG-AVVCAQFLVLHQRCQLMQLDIAGNAVGAYGAQLV---VDAMLTNRTLTS----------LNVARNAVGDDGARHIGRLLND--AMSTLRNLDISGNGITEDGFAYVATGLERNRRLCTLIASGNSLMKTGV 324          
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: A0A8C2F7S0_CYPCA (Uncharacterized protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2F7S0_CYPCA)

HSP 1 Score: 59.7 bits (143), Expect = 1.360e-5
Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 0
Query:  218 SGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLSAVVL--TPKAE----FADRVLGDRGGLAVALRQSLQRLAD 343
            S + +L L GN + +TG +++  +L + +C+  L++L LS  +IT +G++ LA SL+    L+ LD+ G   GP GV  + DL+ +   KL  + L  +P A+    +  +VLG    L   L  S  +L D
Sbjct:   72 SNLIELDLSGNKLGNTGIEKICILLKKPQCS--LKKLKLSDCSITEEGYKTLASSLKSNSNLIELDLTGNDPGPSGVQGLIDLLRSGCCKLKTLRLLKSPAAQETCDYLTKVLGKSPLLLTELDLSEDKLGD 201          
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: A0A8C2F6G5_CYPCA (Uncharacterized protein n=3 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2F6G5_CYPCA)

HSP 1 Score: 59.7 bits (143), Expect = 2.430e-5
Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 0
Query:  218 SGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLSAVVL--TPKAE----FADRVLGDRGGLAVALRQSLQRLAD 343
            S + +L L GN + +TG +++  +L + +C+  L++L LS  +IT +G++ LA SL+    L+ LD+ G   GP GV  + DL+ +   KL  + L  +P A+    +  +VLG    L   L  S  +L D
Sbjct:   72 SNLIELDLSGNKLGNTGIEKICILLKKPQCS--LKKLKLSDCSITEEGYKTLASSLKSNSNLIELDLTGNDPGPSGVQGLIDLLRSGCCKLKTLRLLKSPAAQETCDYLTKVLGKSPLLLTELDLSEDKLGD 201          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FR27_ECTSI0.000e+073.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4J855_PLABS5.050e-630.77Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A8C2F7S0_CYPCA1.360e-532.58Uncharacterized protein n=1 Tax=Cyprinus carpio Ta... [more]
A0A8C2F6G5_CYPCA2.430e-532.58Uncharacterized protein n=3 Tax=Cyprinus carpio Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 859..879
NoneNo IPR availableCOILSCoilCoilcoord: 367..398
NoneNo IPR availableCOILSCoilCoilcoord: 903..930
NoneNo IPR availableCOILSCoilCoilcoord: 1035..1055
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 217..244
e-value: 3.7
score: 13.1
coord: 118..145
e-value: 55.0
score: 4.8
coord: 276..303
e-value: 3.6
score: 13.2
coord: 32..59
e-value: 7.2
score: 11.1
coord: 60..87
e-value: 0.02
score: 24.0
coord: 248..275
e-value: 0.064
score: 22.4
coord: 176..203
e-value: 0.04
score: 23.1
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 17..86
coord: 220..409
coord: 93..201
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 17..302
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 60..81
e-value: 0.029
score: 14.4
coord: 251..269
e-value: 0.19
score: 11.9
coord: 180..195
e-value: 0.092
score: 12.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..210
e-value: 2.8E-33
score: 116.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 212..401
e-value: 7.0E-17
score: 63.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96contigEcto-sp13_S_contig96:20274..28579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96.21213.1mRNA_Ecto-sp13_S_contig96.21213.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96 20161..28787 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96.21213.1 ID=prot_Ecto-sp13_S_contig96.21213.1|Name=mRNA_Ecto-sp13_S_contig96.21213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1075bp
MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGA
GALSKALKGNSSLRHLGLPGNSIGDVGVGAIGRALEGNLGCVLASVDLSA
TGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKASTSLH
TVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKG
ISALCRNQQDTAGGGSGSGIRDLRLRGNNITHTGAKELATILSEDRCARD
LRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADL
IAASGPKLSAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGS
VVEVGLGAFLRADPVAAASIEETLRERREQQQQQQQQQQQQAREAQSSER
SAREGSKRGTAAAVAAAGPSRSTEKSRAANRTGGGGGGGRKRAEGPKASP
AAGGRRAGGGTAPRSAGGDGGIPTTPRTSNRSNNNPGGRSRQQQGIGKSG
ARATAVERPKAGLERQKAASGTAERQRRGAGGPRPSPPSGGGVGTSASSS
GPGGLQRTSSKASMRGGGGTGGKSETGQPRQAVVTGQHHKTTAATLAARD
RAAAGAHAAPHRRLHQGEELDSIEGFTEPRQSPRSMPPTRELLASQAAAA
ALAAGRGGNTGFYGDGGSGGKKAAGPVSSTGVEAAASGRVVESIADVVSK
VMGDTAAVADGLVTPPPVAPSTWDWDKDSGGPAGSAAAGKKEDNDADDSP
STTASGASTMVPSSVGPVSTGQQGGGAKAVALSRKSSAASCSTAPESSSE
PEVAAGMTSLALSDGRRSGSKSSSRGTTGNEVSSGGGGGSQQQLVTVEDA
SRMLAPLVAQEVEKETKKIEIRMQNEMNSALRTMRSDMEAIDREGLMARV
AMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAASSSSSVAAAP
TPPPPTPALGGAADVVVRLQSPSSASETSAALTKSNRAPDTPEARPLVTW
SGGDGYFSSTAGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLL
GHEERQRADPRAAEGLGMTPAMWA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf