mRNA_Ecto-sp13_S_contig96.21213.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig96.21213.1
Unique NamemRNA_Ecto-sp13_S_contig96.21213.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: D7FR27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR27_ECTSI)

HSP 1 Score: 1135 bits (2937), Expect = 0.000e+0
Identity = 813/1102 (73.77%), Postives = 823/1102 (74.68%), Query Frame = 2
Query:  209 MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGAGALSKALKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGCVLASVDLSATGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKASTSLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDTAGGGSGSGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLSAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVEVGLGAFLRADPVAAASIEETLRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSRQQQGIGKSGARATAVERPKAGLERQKAASGTAERQRRGAGGPRPSXXXXXXXXXXXXXXXXXGLQRTSSKASMRXXXXXXGKSETGQPRQAVVTGQHHKTTAATLAARDRAAAGAHAAPHRRLHQGEELDSIEGFTEPRQSPRSMPPTRELLASQAAAXXXXXXXXXXXXXXXXXXXXXKKAAGPVSSTGVEAAASGRVVESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWDKDSGGPAGSAXXXXXXXXXXXXXXXXXXXXASTMVPSSVGPVSTGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EVAAGMTSLALSDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQ---------------------------NEMNSALRTMRSDMEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAASXXXXXXXXXXXXXXXXALGGAADVVVRLQSPSSASETSAALTKSNRAPDTPEARPLVTWSGGDGYFSSTAGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQRADPRAAEGLGMTPAMWA 3430
            MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGAGAL+KALKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGCVLASVDLSATGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKAS SLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQD AG  SGSGIRDLRLRGNNITHTGAKELATILSE RCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKL+AVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVE                                                                                                                                             GIGKSGAR T +ERPKAGLERQKAA GTAERQ          XXXXXXXXXXXXXXXXX            XXXX  GK ETGQPRQ VV GQHHKTT ATLAARDRAA  AHAAPHRRLHQGEELDSIEGFTE RQ+P+ MPPTRELLAS    XXXXXXXXX       XXXXXKKAAGP  S G+EA+ASG VVESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWD +SGGPAGSA    XXXXXXXXXXXXXXXX   MVPSSVGPVS    XXXXXXXXXXXXXXXX             EVAAGMTSLALSDG                  XXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQ                           NEMNSALRTMRS+MEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAAS   XXXXXXXXX      GGAADVVVRLQSPSSASETSAAL KSNRAPDTPEARPLVTWSGGDG FSS AGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQR DPRAAEGLGM+PAMWA
Sbjct:    1 MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGAGALAKALKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGCVLASVDLSATGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKASASLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDAAG--SGSGIRDLRLRGNNITHTGAKELATILSEGRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLTAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVE---------------------------------------------------------------------------------------------------------------------------------------------GIGKSGARGTGIERPKAGLERQKAAGGTAERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGKPETGQPRQPVVAGQHHKTTTATLAARDRAAVDAHAAPHRRLHQGEELDSIEGFTEQRQAPKLMPPTRELLASXXXXXXXXXXXXXNTGFYGDXXXXXKKAAGPGPSAGLEASASGGVVESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWDTNSGGPAGSAATGKXXXXXXXXXXXXXXXXXXXMVPSSVGPVSXXXXXXXXXXXXXXXXXXXXASFSTAPESSSEPEVAAGMTSLALSDGSRSGLNSSSQGTTAIEVSXXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQRRVPSSVVCAAAKRVRLALLKHLGAWQNEMNSALRTMRSEMEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAASVAAXXXXXXXXX------GGAADVVVRLQSPSSASETSAALNKSNRAPDTPEARPLVTWSGGDGDFSSAAGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQRTDPRAAEGLGMSPAMWA 953          
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: A0A0G4J855_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J855_PLABS)

HSP 1 Score: 62.4 bits (150), Expect = 5.700e-6
Identity = 48/156 (30.77%), Postives = 76/156 (48.72%), Query Frame = 2
Query:  626 SNLLKASTSLHTVLAGGNYLGDRGLAALCGAFCYL-KPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDTAGGGSGSGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGV 1090
            + +L ++  L  V+  GN LG  G A +C  F  L +  +++ LD++GN +G  GAQ +   + A+  N+  T+          L +  N +   GA+ +  +L++      LR LD+S N IT DGF  +A  L   R L  L  +G  L   GV
Sbjct:  185 TEVLLSAPQLRKVVLSGNRLGRHG-AVVCAQFLVLHQRCQLMQLDIAGNAVGAYGAQLV---VDAMLTNRTLTS----------LNVARNAVGDDGARHIGRLLND--AMSTLRNLDISGNGITEDGFAYVATGLERNRRLCTLIASGNSLMKTGV 324          
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: A0A8C2F7S0_CYPCA (Uncharacterized protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2F7S0_CYPCA)

HSP 1 Score: 59.7 bits (143), Expect = 1.520e-5
Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 2
Query:  860 SGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLSAVVL--TPKAE----FADRVLGDRGGLAVALRQSLQRLAD 1237
            S + +L L GN + +TG +++  +L + +C+  L++L LS  +IT +G++ LA SL+    L+ LD+ G   GP GV  + DL+ +   KL  + L  +P A+    +  +VLG    L   L  S  +L D
Sbjct:   72 SNLIELDLSGNKLGNTGIEKICILLKKPQCS--LKKLKLSDCSITEEGYKTLASSLKSNSNLIELDLTGNDPGPSGVQGLIDLLRSGCCKLKTLRLLKSPAAQETCDYLTKVLGKSPLLLTELDLSEDKLGD 201          
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: A0A8C2F6G5_CYPCA (Uncharacterized protein n=3 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2F6G5_CYPCA)

HSP 1 Score: 59.7 bits (143), Expect = 2.730e-5
Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 2
Query:  860 SGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLSAVVL--TPKAE----FADRVLGDRGGLAVALRQSLQRLAD 1237
            S + +L L GN + +TG +++  +L + +C+  L++L LS  +IT +G++ LA SL+    L+ LD+ G   GP GV  + DL+ +   KL  + L  +P A+    +  +VLG    L   L  S  +L D
Sbjct:   72 SNLIELDLSGNKLGNTGIEKICILLKKPQCS--LKKLKLSDCSITEEGYKTLASSLKSNSNLIELDLTGNDPGPSGVQGLIDLLRSGCCKLKTLRLLKSPAAQETCDYLTKVLGKSPLLLTELDLSEDKLGD 201          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FR27_ECTSI0.000e+073.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4J855_PLABS5.700e-630.77Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A8C2F7S0_CYPCA1.520e-532.58Uncharacterized protein n=1 Tax=Cyprinus carpio Ta... [more]
A0A8C2F6G5_CYPCA2.730e-532.58Uncharacterized protein n=3 Tax=Cyprinus carpio Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96contigEcto-sp13_S_contig96:20161..28787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1151.7
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FR27
Model size3546
KEGG koko:K17576
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.interleukin-8 biosynthetic process
EggNOG OGsKOG4308@1,KOG4308@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-09_003750.1
Cds size3225
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96.21213.1prot_Ecto-sp13_S_contig96.21213.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig96 20274..28579 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464224.8378136-UTR-Ecto-sp13_S_contig96:20160..202731681464224.8378136-UTR-Ecto-sp13_S_contig96:20160..20273Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig96 20161..20273 -
1681464224.9323587-UTR-Ecto-sp13_S_contig96:28579..287871681464224.9323587-UTR-Ecto-sp13_S_contig96:28579..28787Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig96 28580..28787 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464224.8524365-CDS-Ecto-sp13_S_contig96:20273..208761681464224.8524365-CDS-Ecto-sp13_S_contig96:20273..20876Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig96 20274..20876 -
1681464224.8648226-CDS-Ecto-sp13_S_contig96:22043..221671681464224.8648226-CDS-Ecto-sp13_S_contig96:22043..22167Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig96 22044..22167 -
1681464224.8818667-CDS-Ecto-sp13_S_contig96:22918..230211681464224.8818667-CDS-Ecto-sp13_S_contig96:22918..23021Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig96 22919..23021 -
1681464224.891662-CDS-Ecto-sp13_S_contig96:23459..252921681464224.891662-CDS-Ecto-sp13_S_contig96:23459..25292Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig96 23460..25292 -
1681464224.9005277-CDS-Ecto-sp13_S_contig96:25650..258091681464224.9005277-CDS-Ecto-sp13_S_contig96:25650..25809Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig96 25651..25809 -
1681464224.9101741-CDS-Ecto-sp13_S_contig96:26210..264381681464224.9101741-CDS-Ecto-sp13_S_contig96:26210..26438Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig96 26211..26438 -
1681464224.921816-CDS-Ecto-sp13_S_contig96:28404..285791681464224.921816-CDS-Ecto-sp13_S_contig96:28404..28579Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig96 28405..28579 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig96.21213.1

>prot_Ecto-sp13_S_contig96.21213.1 ID=prot_Ecto-sp13_S_contig96.21213.1|Name=mRNA_Ecto-sp13_S_contig96.21213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1075bp
MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGA
GALSKALKGNSSLRHLGLPGNSIGDVGVGAIGRALEGNLGCVLASVDLSA
TGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKASTSLH
TVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKG
ISALCRNQQDTAGGGSGSGIRDLRLRGNNITHTGAKELATILSEDRCARD
LRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADL
IAASGPKLSAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGS
VVEVGLGAFLRADPVAAASIEETLRERREQQQQQQQQQQQQAREAQSSER
SAREGSKRGTAAAVAAAGPSRSTEKSRAANRTGGGGGGGRKRAEGPKASP
AAGGRRAGGGTAPRSAGGDGGIPTTPRTSNRSNNNPGGRSRQQQGIGKSG
ARATAVERPKAGLERQKAASGTAERQRRGAGGPRPSPPSGGGVGTSASSS
GPGGLQRTSSKASMRGGGGTGGKSETGQPRQAVVTGQHHKTTAATLAARD
RAAAGAHAAPHRRLHQGEELDSIEGFTEPRQSPRSMPPTRELLASQAAAA
ALAAGRGGNTGFYGDGGSGGKKAAGPVSSTGVEAAASGRVVESIADVVSK
VMGDTAAVADGLVTPPPVAPSTWDWDKDSGGPAGSAAAGKKEDNDADDSP
STTASGASTMVPSSVGPVSTGQQGGGAKAVALSRKSSAASCSTAPESSSE
PEVAAGMTSLALSDGRRSGSKSSSRGTTGNEVSSGGGGGSQQQLVTVEDA
SRMLAPLVAQEVEKETKKIEIRMQNEMNSALRTMRSDMEAIDREGLMARV
AMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAASSSSSVAAAP
TPPPPTPALGGAADVVVRLQSPSSASETSAALTKSNRAPDTPEARPLVTW
SGGDGYFSSTAGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLL
GHEERQRADPRAAEGLGMTPAMWA*
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mRNA from alignment at Ecto-sp13_S_contig96:20161..28787-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig96.21213.1 ID=mRNA_Ecto-sp13_S_contig96.21213.1|Name=mRNA_Ecto-sp13_S_contig96.21213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8627bp|location=Sequence derived from alignment at Ecto-sp13_S_contig96:20161..28787- (Ectocarpus species13 EcNAP12_S_4_19m)
GTACACAAGAACGCTGGCTTCCGCTCTTGCGTGTGGATGAGAGAGCAACA AGAGCGGCAGACGCACGTTCGGGAGGGTTCAAGGAAGAGATCCTCTTAGA TCAGCGGCCTTGCCCTCCTCTCTGCTTGAGAAAAGAGACGGGGAGGATAA AGCTGACGAAAAAAAAGCGGGAGAAAAGAACCGACTGCCCCGGAGGAGGT GAACACCGATGAGCGCGCTGGACGTAAGAAATGGGAGGGTGGATATCGAG GTGCCAACGGACGAGGACGCGAAGCATTGCGCTCGCGTGTTGAAGGATCA GCACTCCAGCCTCAAGTCCATCGATCTCAGGAGGGGTCTCGTGACGAGCG CGGGAGCCGGTGCTCTCTCCAAGGCGCTCAAAGGTGGGTGAAGAGCTCAT GTTTGGCGGGTTGGGGGGCTGGCCTTGGCCAGATCGGATGGTGTGCACGG AGAGGGTCGACAGGATGCGCCGGTGGCGTGATTACATCTGGGTCCCTTCA AGTGCTCTAGAAGCCCCCAGGCGACCTACTTGAATCGCCGTTCGTCTCTA ACGCTCCCAACAACTTTGATCTTGGGAGGATTGATTGATTTCTCCTCTCT GTCTGTCGCATCAAGGAGGAAACTGTACTCACGCCCAAACAATCCAATTT CACGCGGGATCGAGGGATCCGCACAACAACGGTCGATAGCTTGCAATCAA ATCGGTCTCCTTTTTTTCGTTGCCGTCCCTTGTGGCGACAATCCGTGAGG ATCCTCACGCTACAGCACATTGAACGATGCTCGCTGCGAAAAGAAACAAA CGAACGTGCATGGACTTCCGTTCTGTATAATACGGTGTACAGCAGTCTAG ATAGAGTCTATCCGTCCCCTGCATCTAGGCAACCGCGTGGTAAATAGCAG TTTCGACGACATACAAAACTAGTCTCGAGGGCAGCACAAGCATGTCCTCC CCTGCTGCCTCCTGATAGCTGCAGCAGGGCAGAAGTACAAGAGCGGCGGG CGTTGGCAGCAAGCAGCATCAAGTATCCAGAGGCGACTCAAAGGGCCGCG GCCCACGCACACACGTGTAACCTCCCCAGACGTACCACGAACCCCACCAA TTTACAACCCACCACACAGAATCGACCTCAGGATTGGTGATCTAACCACA ACCGCATAACTTTCCTGGGCAGCCCCTCCATTTTCTCTTTAAAGTAAACC ATGTTTGTCCGCGCGGTCTTGCTCTCGAAGGTCACCTATCTCGGCCGTCA TGAAGAAGACCGCCCTCAAGACATGTATCTACATCGTTTGACCACCATCT TCCACCACAATTCTTTGTAAATCCAACGGAGGTTGGCTTGGGCGGGGATA TTCAGTCGGCATTGGCTTGCATGCAAGGCGAGGTGTATCAGACGAAAGGG GACTAAATAGCACGAGCGGTCTACTGGCCCTTTTTCTGTTGAAACCGCAC GGGCCAGTGATGTGATACTACGGAGCGCCCGGAACGATGGCGGGGCCTGT ATATACGCCAGCGCTGGCGACAGTTCAACAGCAGTTTTGGGCTGTGGTTG GAGGTAGACACTAAACCAAAGCCACTAGCAGATTTCCACCCCTCAGGCTT CACCACAGGGCTAGGCCTCGCTAGGCCTAACTCACACCTAAACCCAACCC TAACCTTGACCCACACCCCAAGCCACTAACTAATTAAGAGGTTGTTGTTC CGTGGGTAACGTCGCTGTACCGAGCAGCAGGAGCGCGCGCTTCGCGCTCG CCAGCCCTGGCCTATAAACGCCTCGCGCGACGTAGCAGCGTGCATGTATG TACCGCATCCGGCCGCCGCCGCCGCCGCCGTTGCCGTTGTGTACGGTACA TTTGTACTGTAGTCCATATCTGTTCGGACCCTGTTGTGGTCTGTCAGTTG GGTCAGAGGCACAATGAAAACGCATCGTGCATTTCTCGTAATCCGCTGGA ATACGCCCCGCTACCAGCACGCCCCCGATTCCATTTCCCGGTGCTGCTTG CCGTCCCTGCTGCTATGTTTGCGAACCGCTTCATGCATCTCTCTTGATCC GCTGACAATCGAAAAAAAATAGCTCGCCACCATCACGCCTCCGATTCCTG TGCATGTGTCCGGTTCCTGCTTGCTGTACGTATCTTTCATGATCCGCTGA AATCGGAAAATGTAAAAATACATGGCCACCAGCGCGCCTCCGAATCCTAT ACACATATTCTACGTTCCCACATCCGGTGCTTCGTGCGTCCCTGCAATAT GCGAAACTATATTTTGCATGTATCTCTCGGTATCCGCTGAAATCGCAAAA TACACCCCGCCACCTCCGATCCCTGTACACGTGCCCTTGTTTTCCTCAGG TAACTCAAGTCTGCGACACCTGGGCCTGCCGGGCAACAGCATCGGAGACG TCGGTGTTGGTGCTATAGGGCGCGCGTTGGAAGGAAACCTTGGGTGCGTC CTGGCGTCCGTAGACCTGTCTGCCACAGGCATCACGGTGGTGGGGCTGTC TAACCTCGTGCAAGGGGTGTCCAGGCTGCCGAACCTGCATACGGTCTGCC TCAACGACAACAACCTTGCGCAAGAGGGTGAGCTTCTTCTTTTTTTTATT TTTCTGCCATGGTTTTCCTTGTTCGAGAACGACGCATGCGAGACCCGGCC GTGCGAGGTGTAGACTTGCTGGCTGTTTCGCGGAGAGAGCCGGGGCTGCG TTGAGGGGGACGATGGTCGGTCAGCCAGCGCCTTCGGCTCCCGTTGTAGA AGAAGCAGCAGCACCAGCAGCAGACGCCGAAGCTATTTAGTCGCGTTGCG TTGCTTGTTGAGGTGCACCGCTCTCGACCTCGAGCTTTCCGAACCAATCC ACCTGCTGCACTAACATTTGTTGTTGCGGCAGCATGCCCGGCCGTAGTCG TGTCGACCAGTATCCACGCTTTGTTTGTGTCCCTTGTGTGTCCCTTCCTC CGCGCCACTGGTGCAACGGACGCAACAGCCGGACTTCAGCTGTCGAACCT CCTAAAGGCAAGCACGTCGCTGCACACGGTGCTGGCCGGCGGGAACTATT TGGGAGACCGGGGGCTGGCGGCGCTGTGCGGTGCTTTCTGCTACCTCAAG CCGGCGAGGGTGCTCAGCCTGGACGTCAGCGGGAATGGTATGCAGAAAAA AACCGGCAATCTGCCGCACTAAGGCGGGAGAGTATGGGCGTAACGTACGA TCAACAGCAGTAGTTGCCGCCACAAAAAATACGGCAAGGCCATTAACCCT CTTGTTTACATGGTCATTTCTCAAGGCAAACACAATGCTCGACACGAGTA TTGCTATCGGAAACACTTCGGGTGTCTTCATCGTGTACCCGCGCATGCAC GCGCATGCCTCCTTTATCCTGACTCTCAAGCCTCCTTGCCAGAGTACAAC AAAACGTCATGTTTCAGCACTAGAATTGTATTGCTCATACTCTCGGTGTT GACTCACTCGTGCATGAGCTTAAAACGACCCCGGCCGCCTCCCAGGTATC GGAGACCTCGGCGCCCAGTGGCTCTGTAAGGGCATCTCCGCCCTGTGCCG CAACCAACAAGACACGGCCGGCGGCGGCAGCGGCAGCGGCATCCGCGACC TGCGCCTCCGAGGCAACAACATCACCCACACTGGCGCGAAAGAGCTCGCC ACCATCCTCTCCGAGGACCGTTGCGCGCGCGACCTGCGCGAGCTCGACCT GTCGATGAACACGATCACCGCGGACGGCTTCCGCCCCCTTGCCGTTTCGC TCCGTGGTTGCCGGGAGCTCGTCCGGCTGGACGTGGCCGGCTGCCGACTC GGCCCCGGAGGTGTGGACGCTGTCGCCGACCTCATCGCCGCCTCTGGGCC GAAGCTCAGCGCCGTTGTTCTGACGCCCAAGGCGGAGTTCGCGGACCGAG TGCTGGGGGACCGGGGGGGGCTCGCGGTTGCGCTGCGGCAGTCCCTCCAG CGGCTGGCGGACTCGCTCCCGTTCGCCGGGAGCGTGGTGGAGGTAGGGCT CGGCGCCTTCCTCCGTGCGGACCCCGTCGCCGCGGCCAGCATTGAGGAGA CCTTGCGCGAGCGCCGGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCAAGCGCGAGAAGCACAATCGTCGGAGCGTAGCGCGAGAGAGGGGAG CAAACGAGGCACTGCTGCTGCGGTGGCGGCGGCGGGCCCTTCGAGATCGA CCGAAAAGTCGCGGGCCGCCAACAGGACCGGCGGCGGCGGGGGGGGAGGT CGGAAGAGGGCCGAAGGGCCGAAGGCGTCGCCTGCCGCGGGGGGGCGGCG GGCTGGAGGGGGCACTGCCCCGCGCTCCGCCGGCGGCGACGGCGGGATTC CGACTACCCCGAGGACGTCTAACCGGTCCAACAACAACCCCGGAGGCCGC TCGCGTCAGCAGCAGGGCATCGGCAAGAGCGGGGCGCGCGCGACGGCGGT CGAGCGGCCGAAAGCTGGCCTGGAGCGGCAGAAGGCGGCGAGCGGAACGG CGGAGCGGCAGCGGAGAGGGGCGGGGGGTCCGCGACCTTCTCCGCCGTCT GGAGGAGGTGTTGGAACAAGCGCGTCGTCCTCGGGACCCGGTGGCCTTCA ACGGACGTCGAGCAAGGCGTCCATGCGAGGAGGCGGGGGAACCGGGGGAA AATCTGAAACCGGGCAACCGAGACAGGCGGTGGTGACGGGCCAGCACCAC AAGACGACGGCGGCGACGCTTGCCGCTCGCGATCGTGCCGCCGCCGGTGC CCACGCCGCCCCCCACAGGCGCTTGCACCAGGGGGAGGAGCTGGACTCGA TCGAAGGGTTCACGGAGCCACGGCAATCTCCGAGGTCGATGCCGCCAACC CGGGAGTTGCTGGCGAGCCAGGCGGCCGCGGCGGCATTAGCAGCCGGTAG AGGTGGCAACACGGGCTTTTACGGTGACGGCGGCAGCGGGGGTAAGAAGG CGGCGGGGCCAGTGTCCTCGACAGGCGTGGAGGCCGCGGCCAGCGGGCGT GTCGTAGAATCGATCGCGGATGTGGTGTCCAAGGTGATGGGGGACACTGC GGCCGTGGCGGACGGTCTTGTAACGCCTCCTCCCGTCGCGCCTTCGACGT GGGATTGGGACAAGGATAGTGGTGGCCCTGCTGGGTCTGCGGCGGCGGGA AAGAAAGAGGACAACGATGCCGATGACTCCCCTTCTACTACGGCCAGCGG TGCTTCTACGATGGTTCCGTCTTCGGTTGGGCCGGTGTCGACGGGGCAGC AAGGAGGCGGGGCCAAGGCGGTGGCGCTGTCGCGGAAATCGTCGGCCGCG AGCTGTTCTACAGCACCCGAGTCGAGCTGTGAGTGCTTTGCGTCCCAGAC GGTCTGTGGCGTGAGAATGTGGGCGAAGAAGTTCTGGGTTGTGCCGAACG TGAACTAGTCGCCACGAAATTGTTCCACCAGCCGCTCCCAGTTCATGCAT CTCTCGAGATGCCGTTGTGTGCTTGCGGTCCGTGATTTGGACGGCTCGTG AGGGTGATGTATTTTTCTCAAGACAAGTCTTCTACATACCCTCTCTGTTC CAGCGCCAACATGCCGCCGAATTTGACGTGTTTGTTTGATCGAACAGTCG CGGCGTGACTTTCCCTGTGTTTCGATGGGAGTGTGGAAGAATAGCATTTG TTTTCTGTCACGATACCGTACGTAGCATCGGTACTGGTGCGAATAAATAG GCTTGGCTGACTGGCCGCATTTGCGCTCTTCTCTATGCCAACCTTACAAA TCCGTGCGAACTTCAGCGGAGCCAGAGGTGGCGGCGGGGATGACGTCTCT AGCGCTGAGCGACGGTCGCAGGTCAGGCTCGAAATCGAGCTCTCGGGGAA CCACGGGGAATGAAGTCAGGTATACCTGGTATATGTTTCGTGCGTTTGTT TTGTTTGCCGGGTTGGATGCTGTGGCCGCGGCATATCTGCGTCGCCCAGG TCGTGGTGTCTCGTTGGTTGGAAGCCCATCCCGTCGACGTACGTGCACGC TTATTTGCGGCGAAACCGTGGGATCAGTGTTTCAGCTGAAATCGAGTGGT GGGCGTGGTCTCTTTCGAGCGAGCTGCAAACGTTGTCGCTTGTGGTTGTC TTGACGATGCGGCTTCAGAAAAAAACAGCACATGTACTGCTGTTTGGGAG TCGTGCATGGCCGCGCAAATGCCTCGTGTGTCTGGGAAAACCCTCCCAGC GGCTTCGTCAAATACTATTTAGACACTGGTATGTAACGATATAGCATTTT CTAGCAGCAGGCAGGTAGGTGCCTTGTCACGTGACTCTCTCGCACGTGCG GGGCCCCTTTTCTTTCTTGGGGCATCCAGATGAGCGCTTGAGCTGACGTC TGCTACCGAATCCAACGGCTTGGGGTTAGAGAGAGAGAGAGAGAGAAAGA GAGAGGGAGGGAGGGGGGGGGGCGGTACAGAGAGACAGACAGAGGCAGAG AGACAGACAAAAGATAGAGGCTAGCAGAGAGACAGAGACAAAGACAGAGG CAAGCAGAGAGACAGACAGACTGAGAGGGACATAGAATCTGTTTTGAGCC CGAGACCTAACCTTCGCCGGTTGTCGTTGATGCGCATTTTTTTTTCCGGT CACACTTGGAAACGAAGCAGCTCTGGCGGGGGCGGCGGTAGCCAGCAGCA GCTGGTTACTGTGGAAGACGCGAGTCGGATGCTCGCTCCCCTTGTTGCCC AAGAGGTCGAAAAGGAGACCAAAAAGATTGAGATCAGGATGCAGGTGCGT GTGCGTGTGTTCGTTTCACCGCATCGACCGGGCTTTAGCTGGTTGGCCAA TGAAACGACGCCAGTCTCCGTGCGGGTGTGTGTGTCCGCTCGTCCCATCT GTTCTGGCGCCGGTTTGCAGGCCTTCGGCGCATGTACCTGATGTACCAGC CGGGACCAAACAAGAGGAAGGTCACACAGCAGTGAAAACGGAAAATGTGT GGTTGGGTGTTGGGTGCTGTCGGCTGTAAGCCCTTGCAGAGAGGCACGTG CCTTCTTCCGTCGTGTGCGTGTGCGTACCGCGTACGGTTAGCGCTGTTAA ATTAAGCACGCAGGAGCGTGGCAGTTATTGACAAAATTGATATAACATAG CCTCGAAAAGAACAAGTATACGAATTTTAACAATATGTGTGGGCCCGGTT CAGAAGCTCTTCTACACTCAAAACCTATGTGGCGGCCCATTTGTAGCATA ACCCCAGGCACTAAGAACGCCAGCCTCGACCAGCACAAGAGGTCTTCAAC TGCGGGCGCTTGCTGTCGTTTGTTATGCGCAAGGTTAGGTAGAAGCTCAC ACGGTAGCCCCGCCATCGCGTAATTTCGTTGCCGTTCCTTAGTCTTCCCC CCGCTTCGCTCATGACTCCGCTCCCAAAAATGATTCCTTGCAGCAGGAAA GTATCCTTGAGATAATACCACCTCTGGCATTCGTTGTTGCATGATTTTCT GCGGGGCGCCATGCCTCTGAACTCAGTAGCGTCCTCTTGAAAGCAGGGAC TGCAGTGCTGTTTTGATGGTTCGTGTGAGGCTGAAGGATGTCTTTTTCGG TCGCAAGGCAAACGTGTTTGGAGCGGGATGTGTGATTAGTATGTTTCGAA GAAACTGTTTGTGAGACCAGCGGTTGTTGTCTGGCGTTGACCTACCACCA TGAAACGCCAGCGCACCTACAGCAGTGGATCTCTGGTGAAGGACACACGT GATTTTTCGTACAAGCTGGTGTCCCTAAGCCAGGGAAGTCTCCTTCGGAA TGGTATCCCTCCTTACGTTGTACATTCGGCGGGGCACCATGCCTGTGGGA GAAAGTTGTCGTTTCCCGGGGACAACTGTACTCTTAAAACGAAAATGGAG GCAGTGCTCACGACCCCATTAGCAAGCACCCACACCCACCCACCCACGCT TTTTTCTCCAGAACGAGATGAACTCAGCGTTGCGCACGATGAGGTCGGAT ATGGAGGCTATCGACCGCGAGGGGCTGATGGCGCGGGTGGCCATGGAGAA GCGCCTCAAGACGGGCATCAAGCGGCTGCTGGAGCGCATCGACCACCTGG AGCGGCGGTTCTCCAAGCTCGAGCGGGAGGACCGGAAGCGACTCGCCCTG GAAGCGGCTTCTTCGTCTTCCTCTGTAGCAGCAGCGCCGACGCCGCCACC GCCGACGCCGGCCTTGGGGGGTGCCGCCGACGTTGTAGTCCGTCTGCAGT CCCCCTCCTCGGCAAGCGAAACCTCGGCTGCCTTGACCAAGAGCAATCGC GCGCCGGATACACCGGAGGCTCGGCCGCTCGTGACGTGGTCGGGAGGCGA CGGGTATTTCAGCAGCACGGCCGGGTCAACCGCCGCCTCTTCTTGCGACG GAGAGTACTCCGAAGCAGGGGATGACACGGAGGCGGACATCGTCCGGATG CTCGAGGAGAAGATGGCGGCGCTGGAGGGAAAGCTCCTGGGCCACGAGGA GCGGCAGCGCGCCGACCCGAGGGCCGCGGAAGGGCTGGGGATGACCCCCG CAATGTGGGCTTGATCCGGTATCTATCAAGGAGGGGTATTTTTCCGGGGG AGGGAGGGATCAACAACTAGCTCTCGATACGGGGAAGGGTTAAGGGAAGG GTGAGGCCTGCCTCCGGTTGTTTGGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig96:20161..28787-

>mRNA_Ecto-sp13_S_contig96.21213.1 ID=mRNA_Ecto-sp13_S_contig96.21213.1|Name=mRNA_Ecto-sp13_S_contig96.21213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig96:20161..28787- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCGCGCTGGACGTAAGAAATGGGAGGGTGGATATCGAGGTGCCAAC
GGACGAGGACGCGAAGCATTGCGCTCGCGTGTTGAAGGATCAGCACTCCA
GCCTCAAGTCCATCGATCTCAGGAGGGGTCTCGTGACGAGCGCGGGAGCC
GGTGCTCTCTCCAAGGCGCTCAAAGGTAACTCAAGTCTGCGACACCTGGG
CCTGCCGGGCAACAGCATCGGAGACGTCGGTGTTGGTGCTATAGGGCGCG
CGTTGGAAGGAAACCTTGGGTGCGTCCTGGCGTCCGTAGACCTGTCTGCC
ACAGGCATCACGGTGGTGGGGCTGTCTAACCTCGTGCAAGGGGTGTCCAG
GCTGCCGAACCTGCATACGGTCTGCCTCAACGACAACAACCTTGCGCAAG
AGGCCGGACTTCAGCTGTCGAACCTCCTAAAGGCAAGCACGTCGCTGCAC
ACGGTGCTGGCCGGCGGGAACTATTTGGGAGACCGGGGGCTGGCGGCGCT
GTGCGGTGCTTTCTGCTACCTCAAGCCGGCGAGGGTGCTCAGCCTGGACG
TCAGCGGGAATGGTATCGGAGACCTCGGCGCCCAGTGGCTCTGTAAGGGC
ATCTCCGCCCTGTGCCGCAACCAACAAGACACGGCCGGCGGCGGCAGCGG
CAGCGGCATCCGCGACCTGCGCCTCCGAGGCAACAACATCACCCACACTG
GCGCGAAAGAGCTCGCCACCATCCTCTCCGAGGACCGTTGCGCGCGCGAC
CTGCGCGAGCTCGACCTGTCGATGAACACGATCACCGCGGACGGCTTCCG
CCCCCTTGCCGTTTCGCTCCGTGGTTGCCGGGAGCTCGTCCGGCTGGACG
TGGCCGGCTGCCGACTCGGCCCCGGAGGTGTGGACGCTGTCGCCGACCTC
ATCGCCGCCTCTGGGCCGAAGCTCAGCGCCGTTGTTCTGACGCCCAAGGC
GGAGTTCGCGGACCGAGTGCTGGGGGACCGGGGGGGGCTCGCGGTTGCGC
TGCGGCAGTCCCTCCAGCGGCTGGCGGACTCGCTCCCGTTCGCCGGGAGC
GTGGTGGAGGTAGGGCTCGGCGCCTTCCTCCGTGCGGACCCCGTCGCCGC
GGCCAGCATTGAGGAGACCTTGCGCGAGCGCCGGGAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAAGCGCGAGAAGCACAATCGTCGGAGCGT
AGCGCGAGAGAGGGGAGCAAACGAGGCACTGCTGCTGCGGTGGCGGCGGC
GGGCCCTTCGAGATCGACCGAAAAGTCGCGGGCCGCCAACAGGACCGGCG
GCGGCGGGGGGGGAGGTCGGAAGAGGGCCGAAGGGCCGAAGGCGTCGCCT
GCCGCGGGGGGGCGGCGGGCTGGAGGGGGCACTGCCCCGCGCTCCGCCGG
CGGCGACGGCGGGATTCCGACTACCCCGAGGACGTCTAACCGGTCCAACA
ACAACCCCGGAGGCCGCTCGCGTCAGCAGCAGGGCATCGGCAAGAGCGGG
GCGCGCGCGACGGCGGTCGAGCGGCCGAAAGCTGGCCTGGAGCGGCAGAA
GGCGGCGAGCGGAACGGCGGAGCGGCAGCGGAGAGGGGCGGGGGGTCCGC
GACCTTCTCCGCCGTCTGGAGGAGGTGTTGGAACAAGCGCGTCGTCCTCG
GGACCCGGTGGCCTTCAACGGACGTCGAGCAAGGCGTCCATGCGAGGAGG
CGGGGGAACCGGGGGAAAATCTGAAACCGGGCAACCGAGACAGGCGGTGG
TGACGGGCCAGCACCACAAGACGACGGCGGCGACGCTTGCCGCTCGCGAT
CGTGCCGCCGCCGGTGCCCACGCCGCCCCCCACAGGCGCTTGCACCAGGG
GGAGGAGCTGGACTCGATCGAAGGGTTCACGGAGCCACGGCAATCTCCGA
GGTCGATGCCGCCAACCCGGGAGTTGCTGGCGAGCCAGGCGGCCGCGGCG
GCATTAGCAGCCGGTAGAGGTGGCAACACGGGCTTTTACGGTGACGGCGG
CAGCGGGGGTAAGAAGGCGGCGGGGCCAGTGTCCTCGACAGGCGTGGAGG
CCGCGGCCAGCGGGCGTGTCGTAGAATCGATCGCGGATGTGGTGTCCAAG
GTGATGGGGGACACTGCGGCCGTGGCGGACGGTCTTGTAACGCCTCCTCC
CGTCGCGCCTTCGACGTGGGATTGGGACAAGGATAGTGGTGGCCCTGCTG
GGTCTGCGGCGGCGGGAAAGAAAGAGGACAACGATGCCGATGACTCCCCT
TCTACTACGGCCAGCGGTGCTTCTACGATGGTTCCGTCTTCGGTTGGGCC
GGTGTCGACGGGGCAGCAAGGAGGCGGGGCCAAGGCGGTGGCGCTGTCGC
GGAAATCGTCGGCCGCGAGCTGTTCTACAGCACCCGAGTCGAGCTCGGAG
CCAGAGGTGGCGGCGGGGATGACGTCTCTAGCGCTGAGCGACGGTCGCAG
GTCAGGCTCGAAATCGAGCTCTCGGGGAACCACGGGGAATGAAGTCAGCT
CTGGCGGGGGCGGCGGTAGCCAGCAGCAGCTGGTTACTGTGGAAGACGCG
AGTCGGATGCTCGCTCCCCTTGTTGCCCAAGAGGTCGAAAAGGAGACCAA
AAAGATTGAGATCAGGATGCAGAACGAGATGAACTCAGCGTTGCGCACGA
TGAGGTCGGATATGGAGGCTATCGACCGCGAGGGGCTGATGGCGCGGGTG
GCCATGGAGAAGCGCCTCAAGACGGGCATCAAGCGGCTGCTGGAGCGCAT
CGACCACCTGGAGCGGCGGTTCTCCAAGCTCGAGCGGGAGGACCGGAAGC
GACTCGCCCTGGAAGCGGCTTCTTCGTCTTCCTCTGTAGCAGCAGCGCCG
ACGCCGCCACCGCCGACGCCGGCCTTGGGGGGTGCCGCCGACGTTGTAGT
CCGTCTGCAGTCCCCCTCCTCGGCAAGCGAAACCTCGGCTGCCTTGACCA
AGAGCAATCGCGCGCCGGATACACCGGAGGCTCGGCCGCTCGTGACGTGG
TCGGGAGGCGACGGGTATTTCAGCAGCACGGCCGGGTCAACCGCCGCCTC
TTCTTGCGACGGAGAGTACTCCGAAGCAGGGGATGACACGGAGGCGGACA
TCGTCCGGATGCTCGAGGAGAAGATGGCGGCGCTGGAGGGAAAGCTCCTG
GGCCACGAGGAGCGGCAGCGCGCCGACCCGAGGGCCGCGGAAGGGCTGGG
GATGACCCCCGCAATGTGGGCTTGA
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