|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: D7FR27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR27_ECTSI) HSP 1 Score: 1135 bits (2937), Expect = 0.000e+0 Identity = 813/1102 (73.77%), Postives = 823/1102 (74.68%), Query Frame = 2
Query: 209 MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGAGALSKALKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGCVLASVDLSATGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKASTSLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDTAGGGSGSGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLSAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVEVGLGAFLRADPVAAASIEETLRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSRQQQGIGKSGARATAVERPKAGLERQKAASGTAERQRRGAGGPRPSXXXXXXXXXXXXXXXXXGLQRTSSKASMRXXXXXXGKSETGQPRQAVVTGQHHKTTAATLAARDRAAAGAHAAPHRRLHQGEELDSIEGFTEPRQSPRSMPPTRELLASQAAAXXXXXXXXXXXXXXXXXXXXXKKAAGPVSSTGVEAAASGRVVESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWDKDSGGPAGSAXXXXXXXXXXXXXXXXXXXXASTMVPSSVGPVSTGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EVAAGMTSLALSDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQ---------------------------NEMNSALRTMRSDMEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAASXXXXXXXXXXXXXXXXALGGAADVVVRLQSPSSASETSAALTKSNRAPDTPEARPLVTWSGGDGYFSSTAGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQRADPRAAEGLGMTPAMWA 3430
MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGAGAL+KALKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGCVLASVDLSATGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKAS SLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQD AG SGSGIRDLRLRGNNITHTGAKELATILSE RCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKL+AVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVE GIGKSGAR T +ERPKAGLERQKAA GTAERQ XXXXXXXXXXXXXXXXX XXXX GK ETGQPRQ VV GQHHKTT ATLAARDRAA AHAAPHRRLHQGEELDSIEGFTE RQ+P+ MPPTRELLAS XXXXXXXXX XXXXXKKAAGP S G+EA+ASG VVESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWD +SGGPAGSA XXXXXXXXXXXXXXXX MVPSSVGPVS XXXXXXXXXXXXXXXX EVAAGMTSLALSDG XXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQ NEMNSALRTMRS+MEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAAS XXXXXXXXX GGAADVVVRLQSPSSASETSAAL KSNRAPDTPEARPLVTWSGGDG FSS AGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQR DPRAAEGLGM+PAMWA
Sbjct: 1 MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGAGALAKALKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLGCVLASVDLSATGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKASASLHTVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDAAG--SGSGIRDLRLRGNNITHTGAKELATILSEGRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLTAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGSVVE---------------------------------------------------------------------------------------------------------------------------------------------GIGKSGARGTGIERPKAGLERQKAAGGTAERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGKPETGQPRQPVVAGQHHKTTTATLAARDRAAVDAHAAPHRRLHQGEELDSIEGFTEQRQAPKLMPPTRELLASXXXXXXXXXXXXXNTGFYGDXXXXXKKAAGPGPSAGLEASASGGVVESIADVVSKVMGDTAAVADGLVTPPPVAPSTWDWDTNSGGPAGSAATGKXXXXXXXXXXXXXXXXXXXMVPSSVGPVSXXXXXXXXXXXXXXXXXXXXASFSTAPESSSEPEVAAGMTSLALSDGSRSGLNSSSQGTTAIEVSXXXXXXXXXXLVTVEDASRMLAPLVAQEVEKETKKIEIRMQRRVPSSVVCAAAKRVRLALLKHLGAWQNEMNSALRTMRSEMEAIDREGLMARVAMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAASVAAXXXXXXXXX------GGAADVVVRLQSPSSASETSAALNKSNRAPDTPEARPLVTWSGGDGDFSSAAGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLLGHEERQRTDPRAAEGLGMSPAMWA 953
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: A0A0G4J855_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J855_PLABS) HSP 1 Score: 62.4 bits (150), Expect = 5.700e-6 Identity = 48/156 (30.77%), Postives = 76/156 (48.72%), Query Frame = 2
Query: 626 SNLLKASTSLHTVLAGGNYLGDRGLAALCGAFCYL-KPARVLSLDVSGNGIGDLGAQWLCKGISALCRNQQDTAGGGSGSGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGV 1090
+ +L ++ L V+ GN LG G A +C F L + +++ LD++GN +G GAQ + + A+ N+ T+ L + N + GA+ + +L++ LR LD+S N IT DGF +A L R L L +G L GV
Sbjct: 185 TEVLLSAPQLRKVVLSGNRLGRHG-AVVCAQFLVLHQRCQLMQLDIAGNAVGAYGAQLV---VDAMLTNRTLTS----------LNVARNAVGDDGARHIGRLLND--AMSTLRNLDISGNGITEDGFAYVATGLERNRRLCTLIASGNSLMKTGV 324
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: A0A8C2F7S0_CYPCA (Uncharacterized protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2F7S0_CYPCA) HSP 1 Score: 59.7 bits (143), Expect = 1.520e-5 Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 2
Query: 860 SGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLSAVVL--TPKAE----FADRVLGDRGGLAVALRQSLQRLAD 1237
S + +L L GN + +TG +++ +L + +C+ L++L LS +IT +G++ LA SL+ L+ LD+ G GP GV + DL+ + KL + L +P A+ + +VLG L L S +L D
Sbjct: 72 SNLIELDLSGNKLGNTGIEKICILLKKPQCS--LKKLKLSDCSITEEGYKTLASSLKSNSNLIELDLTGNDPGPSGVQGLIDLLRSGCCKLKTLRLLKSPAAQETCDYLTKVLGKSPLLLTELDLSEDKLGD 201
BLAST of mRNA_Ecto-sp13_S_contig96.21213.1 vs. uniprot
Match: A0A8C2F6G5_CYPCA (Uncharacterized protein n=3 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2F6G5_CYPCA) HSP 1 Score: 59.7 bits (143), Expect = 2.730e-5 Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 2
Query: 860 SGIRDLRLRGNNITHTGAKELATILSEDRCARDLRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADLIAASGPKLSAVVL--TPKAE----FADRVLGDRGGLAVALRQSLQRLAD 1237
S + +L L GN + +TG +++ +L + +C+ L++L LS +IT +G++ LA SL+ L+ LD+ G GP GV + DL+ + KL + L +P A+ + +VLG L L S +L D
Sbjct: 72 SNLIELDLSGNKLGNTGIEKICILLKKPQCS--LKKLKLSDCSITEEGYKTLASSLKSNSNLIELDLTGNDPGPSGVQGLIDLLRSGCCKLKTLRLLKSPAAQETCDYLTKVLGKSPLLLTELDLSEDKLGD 201
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 1151.7 |
| Seed ortholog evalue | 0.0 |
| Seed eggNOG ortholog | 2880.D7FR27 |
| Model size | 3546 |
| KEGG ko | ko:K17576 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| EggNOG free text desc. | interleukin-8 biosynthetic process |
| EggNOG OGs | KOG4308@1,KOG4308@2759 |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-09_003750.1 |
| Cds size | 3225 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01009 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681464224.8378136-UTR-Ecto-sp13_S_contig96:20160..20273 | 1681464224.8378136-UTR-Ecto-sp13_S_contig96:20160..20273 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig96 20161..20273 - |
| 1681464224.9323587-UTR-Ecto-sp13_S_contig96:28579..28787 | 1681464224.9323587-UTR-Ecto-sp13_S_contig96:28579..28787 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig96 28580..28787 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681464224.8524365-CDS-Ecto-sp13_S_contig96:20273..20876 | 1681464224.8524365-CDS-Ecto-sp13_S_contig96:20273..20876 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig96 20274..20876 - |
| 1681464224.8648226-CDS-Ecto-sp13_S_contig96:22043..22167 | 1681464224.8648226-CDS-Ecto-sp13_S_contig96:22043..22167 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig96 22044..22167 - |
| 1681464224.8818667-CDS-Ecto-sp13_S_contig96:22918..23021 | 1681464224.8818667-CDS-Ecto-sp13_S_contig96:22918..23021 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig96 22919..23021 - |
| 1681464224.891662-CDS-Ecto-sp13_S_contig96:23459..25292 | 1681464224.891662-CDS-Ecto-sp13_S_contig96:23459..25292 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig96 23460..25292 - |
| 1681464224.9005277-CDS-Ecto-sp13_S_contig96:25650..25809 | 1681464224.9005277-CDS-Ecto-sp13_S_contig96:25650..25809 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig96 25651..25809 - |
| 1681464224.9101741-CDS-Ecto-sp13_S_contig96:26210..26438 | 1681464224.9101741-CDS-Ecto-sp13_S_contig96:26210..26438 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig96 26211..26438 - |
| 1681464224.921816-CDS-Ecto-sp13_S_contig96:28404..28579 | 1681464224.921816-CDS-Ecto-sp13_S_contig96:28404..28579 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig96 28405..28579 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig96.21213.1 >prot_Ecto-sp13_S_contig96.21213.1 ID=prot_Ecto-sp13_S_contig96.21213.1|Name=mRNA_Ecto-sp13_S_contig96.21213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1075bp
MSALDVRNGRVDIEVPTDEDAKHCARVLKDQHSSLKSIDLRRGLVTSAGA GALSKALKGNSSLRHLGLPGNSIGDVGVGAIGRALEGNLGCVLASVDLSA TGITVVGLSNLVQGVSRLPNLHTVCLNDNNLAQEAGLQLSNLLKASTSLH TVLAGGNYLGDRGLAALCGAFCYLKPARVLSLDVSGNGIGDLGAQWLCKG ISALCRNQQDTAGGGSGSGIRDLRLRGNNITHTGAKELATILSEDRCARD LRELDLSMNTITADGFRPLAVSLRGCRELVRLDVAGCRLGPGGVDAVADL IAASGPKLSAVVLTPKAEFADRVLGDRGGLAVALRQSLQRLADSLPFAGS VVEVGLGAFLRADPVAAASIEETLRERREQQQQQQQQQQQQAREAQSSER SAREGSKRGTAAAVAAAGPSRSTEKSRAANRTGGGGGGGRKRAEGPKASP AAGGRRAGGGTAPRSAGGDGGIPTTPRTSNRSNNNPGGRSRQQQGIGKSG ARATAVERPKAGLERQKAASGTAERQRRGAGGPRPSPPSGGGVGTSASSS GPGGLQRTSSKASMRGGGGTGGKSETGQPRQAVVTGQHHKTTAATLAARD RAAAGAHAAPHRRLHQGEELDSIEGFTEPRQSPRSMPPTRELLASQAAAA ALAAGRGGNTGFYGDGGSGGKKAAGPVSSTGVEAAASGRVVESIADVVSK VMGDTAAVADGLVTPPPVAPSTWDWDKDSGGPAGSAAAGKKEDNDADDSP STTASGASTMVPSSVGPVSTGQQGGGAKAVALSRKSSAASCSTAPESSSE PEVAAGMTSLALSDGRRSGSKSSSRGTTGNEVSSGGGGGSQQQLVTVEDA SRMLAPLVAQEVEKETKKIEIRMQNEMNSALRTMRSDMEAIDREGLMARV AMEKRLKTGIKRLLERIDHLERRFSKLEREDRKRLALEAASSSSSVAAAP TPPPPTPALGGAADVVVRLQSPSSASETSAALTKSNRAPDTPEARPLVTW SGGDGYFSSTAGSTAASSCDGEYSEAGDDTEADIVRMLEEKMAALEGKLL GHEERQRADPRAAEGLGMTPAMWA* back to topmRNA from alignment at Ecto-sp13_S_contig96:20161..28787- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig96.21213.1 ID=mRNA_Ecto-sp13_S_contig96.21213.1|Name=mRNA_Ecto-sp13_S_contig96.21213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8627bp|location=Sequence derived from alignment at Ecto-sp13_S_contig96:20161..28787- (Ectocarpus species13 EcNAP12_S_4_19m) GTACACAAGAACGCTGGCTTCCGCTCTTGCGTGTGGATGAGAGAGCAACA
AGAGCGGCAGACGCACGTTCGGGAGGGTTCAAGGAAGAGATCCTCTTAGA
TCAGCGGCCTTGCCCTCCTCTCTGCTTGAGAAAAGAGACGGGGAGGATAA
AGCTGACGAAAAAAAAGCGGGAGAAAAGAACCGACTGCCCCGGAGGAGGT
GAACACCGATGAGCGCGCTGGACGTAAGAAATGGGAGGGTGGATATCGAG
GTGCCAACGGACGAGGACGCGAAGCATTGCGCTCGCGTGTTGAAGGATCA
GCACTCCAGCCTCAAGTCCATCGATCTCAGGAGGGGTCTCGTGACGAGCG
CGGGAGCCGGTGCTCTCTCCAAGGCGCTCAAAGGTGGGTGAAGAGCTCAT
GTTTGGCGGGTTGGGGGGCTGGCCTTGGCCAGATCGGATGGTGTGCACGG
AGAGGGTCGACAGGATGCGCCGGTGGCGTGATTACATCTGGGTCCCTTCA
AGTGCTCTAGAAGCCCCCAGGCGACCTACTTGAATCGCCGTTCGTCTCTA
ACGCTCCCAACAACTTTGATCTTGGGAGGATTGATTGATTTCTCCTCTCT
GTCTGTCGCATCAAGGAGGAAACTGTACTCACGCCCAAACAATCCAATTT
CACGCGGGATCGAGGGATCCGCACAACAACGGTCGATAGCTTGCAATCAA
ATCGGTCTCCTTTTTTTCGTTGCCGTCCCTTGTGGCGACAATCCGTGAGG
ATCCTCACGCTACAGCACATTGAACGATGCTCGCTGCGAAAAGAAACAAA
CGAACGTGCATGGACTTCCGTTCTGTATAATACGGTGTACAGCAGTCTAG
ATAGAGTCTATCCGTCCCCTGCATCTAGGCAACCGCGTGGTAAATAGCAG
TTTCGACGACATACAAAACTAGTCTCGAGGGCAGCACAAGCATGTCCTCC
CCTGCTGCCTCCTGATAGCTGCAGCAGGGCAGAAGTACAAGAGCGGCGGG
CGTTGGCAGCAAGCAGCATCAAGTATCCAGAGGCGACTCAAAGGGCCGCG
GCCCACGCACACACGTGTAACCTCCCCAGACGTACCACGAACCCCACCAA
TTTACAACCCACCACACAGAATCGACCTCAGGATTGGTGATCTAACCACA
ACCGCATAACTTTCCTGGGCAGCCCCTCCATTTTCTCTTTAAAGTAAACC
ATGTTTGTCCGCGCGGTCTTGCTCTCGAAGGTCACCTATCTCGGCCGTCA
TGAAGAAGACCGCCCTCAAGACATGTATCTACATCGTTTGACCACCATCT
TCCACCACAATTCTTTGTAAATCCAACGGAGGTTGGCTTGGGCGGGGATA
TTCAGTCGGCATTGGCTTGCATGCAAGGCGAGGTGTATCAGACGAAAGGG
GACTAAATAGCACGAGCGGTCTACTGGCCCTTTTTCTGTTGAAACCGCAC
GGGCCAGTGATGTGATACTACGGAGCGCCCGGAACGATGGCGGGGCCTGT
ATATACGCCAGCGCTGGCGACAGTTCAACAGCAGTTTTGGGCTGTGGTTG
GAGGTAGACACTAAACCAAAGCCACTAGCAGATTTCCACCCCTCAGGCTT
CACCACAGGGCTAGGCCTCGCTAGGCCTAACTCACACCTAAACCCAACCC
TAACCTTGACCCACACCCCAAGCCACTAACTAATTAAGAGGTTGTTGTTC
CGTGGGTAACGTCGCTGTACCGAGCAGCAGGAGCGCGCGCTTCGCGCTCG
CCAGCCCTGGCCTATAAACGCCTCGCGCGACGTAGCAGCGTGCATGTATG
TACCGCATCCGGCCGCCGCCGCCGCCGCCGTTGCCGTTGTGTACGGTACA
TTTGTACTGTAGTCCATATCTGTTCGGACCCTGTTGTGGTCTGTCAGTTG
GGTCAGAGGCACAATGAAAACGCATCGTGCATTTCTCGTAATCCGCTGGA
ATACGCCCCGCTACCAGCACGCCCCCGATTCCATTTCCCGGTGCTGCTTG
CCGTCCCTGCTGCTATGTTTGCGAACCGCTTCATGCATCTCTCTTGATCC
GCTGACAATCGAAAAAAAATAGCTCGCCACCATCACGCCTCCGATTCCTG
TGCATGTGTCCGGTTCCTGCTTGCTGTACGTATCTTTCATGATCCGCTGA
AATCGGAAAATGTAAAAATACATGGCCACCAGCGCGCCTCCGAATCCTAT
ACACATATTCTACGTTCCCACATCCGGTGCTTCGTGCGTCCCTGCAATAT
GCGAAACTATATTTTGCATGTATCTCTCGGTATCCGCTGAAATCGCAAAA
TACACCCCGCCACCTCCGATCCCTGTACACGTGCCCTTGTTTTCCTCAGG
TAACTCAAGTCTGCGACACCTGGGCCTGCCGGGCAACAGCATCGGAGACG
TCGGTGTTGGTGCTATAGGGCGCGCGTTGGAAGGAAACCTTGGGTGCGTC
CTGGCGTCCGTAGACCTGTCTGCCACAGGCATCACGGTGGTGGGGCTGTC
TAACCTCGTGCAAGGGGTGTCCAGGCTGCCGAACCTGCATACGGTCTGCC
TCAACGACAACAACCTTGCGCAAGAGGGTGAGCTTCTTCTTTTTTTTATT
TTTCTGCCATGGTTTTCCTTGTTCGAGAACGACGCATGCGAGACCCGGCC
GTGCGAGGTGTAGACTTGCTGGCTGTTTCGCGGAGAGAGCCGGGGCTGCG
TTGAGGGGGACGATGGTCGGTCAGCCAGCGCCTTCGGCTCCCGTTGTAGA
AGAAGCAGCAGCACCAGCAGCAGACGCCGAAGCTATTTAGTCGCGTTGCG
TTGCTTGTTGAGGTGCACCGCTCTCGACCTCGAGCTTTCCGAACCAATCC
ACCTGCTGCACTAACATTTGTTGTTGCGGCAGCATGCCCGGCCGTAGTCG
TGTCGACCAGTATCCACGCTTTGTTTGTGTCCCTTGTGTGTCCCTTCCTC
CGCGCCACTGGTGCAACGGACGCAACAGCCGGACTTCAGCTGTCGAACCT
CCTAAAGGCAAGCACGTCGCTGCACACGGTGCTGGCCGGCGGGAACTATT
TGGGAGACCGGGGGCTGGCGGCGCTGTGCGGTGCTTTCTGCTACCTCAAG
CCGGCGAGGGTGCTCAGCCTGGACGTCAGCGGGAATGGTATGCAGAAAAA
AACCGGCAATCTGCCGCACTAAGGCGGGAGAGTATGGGCGTAACGTACGA
TCAACAGCAGTAGTTGCCGCCACAAAAAATACGGCAAGGCCATTAACCCT
CTTGTTTACATGGTCATTTCTCAAGGCAAACACAATGCTCGACACGAGTA
TTGCTATCGGAAACACTTCGGGTGTCTTCATCGTGTACCCGCGCATGCAC
GCGCATGCCTCCTTTATCCTGACTCTCAAGCCTCCTTGCCAGAGTACAAC
AAAACGTCATGTTTCAGCACTAGAATTGTATTGCTCATACTCTCGGTGTT
GACTCACTCGTGCATGAGCTTAAAACGACCCCGGCCGCCTCCCAGGTATC
GGAGACCTCGGCGCCCAGTGGCTCTGTAAGGGCATCTCCGCCCTGTGCCG
CAACCAACAAGACACGGCCGGCGGCGGCAGCGGCAGCGGCATCCGCGACC
TGCGCCTCCGAGGCAACAACATCACCCACACTGGCGCGAAAGAGCTCGCC
ACCATCCTCTCCGAGGACCGTTGCGCGCGCGACCTGCGCGAGCTCGACCT
GTCGATGAACACGATCACCGCGGACGGCTTCCGCCCCCTTGCCGTTTCGC
TCCGTGGTTGCCGGGAGCTCGTCCGGCTGGACGTGGCCGGCTGCCGACTC
GGCCCCGGAGGTGTGGACGCTGTCGCCGACCTCATCGCCGCCTCTGGGCC
GAAGCTCAGCGCCGTTGTTCTGACGCCCAAGGCGGAGTTCGCGGACCGAG
TGCTGGGGGACCGGGGGGGGCTCGCGGTTGCGCTGCGGCAGTCCCTCCAG
CGGCTGGCGGACTCGCTCCCGTTCGCCGGGAGCGTGGTGGAGGTAGGGCT
CGGCGCCTTCCTCCGTGCGGACCCCGTCGCCGCGGCCAGCATTGAGGAGA
CCTTGCGCGAGCGCCGGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAAGCGCGAGAAGCACAATCGTCGGAGCGTAGCGCGAGAGAGGGGAG
CAAACGAGGCACTGCTGCTGCGGTGGCGGCGGCGGGCCCTTCGAGATCGA
CCGAAAAGTCGCGGGCCGCCAACAGGACCGGCGGCGGCGGGGGGGGAGGT
CGGAAGAGGGCCGAAGGGCCGAAGGCGTCGCCTGCCGCGGGGGGGCGGCG
GGCTGGAGGGGGCACTGCCCCGCGCTCCGCCGGCGGCGACGGCGGGATTC
CGACTACCCCGAGGACGTCTAACCGGTCCAACAACAACCCCGGAGGCCGC
TCGCGTCAGCAGCAGGGCATCGGCAAGAGCGGGGCGCGCGCGACGGCGGT
CGAGCGGCCGAAAGCTGGCCTGGAGCGGCAGAAGGCGGCGAGCGGAACGG
CGGAGCGGCAGCGGAGAGGGGCGGGGGGTCCGCGACCTTCTCCGCCGTCT
GGAGGAGGTGTTGGAACAAGCGCGTCGTCCTCGGGACCCGGTGGCCTTCA
ACGGACGTCGAGCAAGGCGTCCATGCGAGGAGGCGGGGGAACCGGGGGAA
AATCTGAAACCGGGCAACCGAGACAGGCGGTGGTGACGGGCCAGCACCAC
AAGACGACGGCGGCGACGCTTGCCGCTCGCGATCGTGCCGCCGCCGGTGC
CCACGCCGCCCCCCACAGGCGCTTGCACCAGGGGGAGGAGCTGGACTCGA
TCGAAGGGTTCACGGAGCCACGGCAATCTCCGAGGTCGATGCCGCCAACC
CGGGAGTTGCTGGCGAGCCAGGCGGCCGCGGCGGCATTAGCAGCCGGTAG
AGGTGGCAACACGGGCTTTTACGGTGACGGCGGCAGCGGGGGTAAGAAGG
CGGCGGGGCCAGTGTCCTCGACAGGCGTGGAGGCCGCGGCCAGCGGGCGT
GTCGTAGAATCGATCGCGGATGTGGTGTCCAAGGTGATGGGGGACACTGC
GGCCGTGGCGGACGGTCTTGTAACGCCTCCTCCCGTCGCGCCTTCGACGT
GGGATTGGGACAAGGATAGTGGTGGCCCTGCTGGGTCTGCGGCGGCGGGA
AAGAAAGAGGACAACGATGCCGATGACTCCCCTTCTACTACGGCCAGCGG
TGCTTCTACGATGGTTCCGTCTTCGGTTGGGCCGGTGTCGACGGGGCAGC
AAGGAGGCGGGGCCAAGGCGGTGGCGCTGTCGCGGAAATCGTCGGCCGCG
AGCTGTTCTACAGCACCCGAGTCGAGCTGTGAGTGCTTTGCGTCCCAGAC
GGTCTGTGGCGTGAGAATGTGGGCGAAGAAGTTCTGGGTTGTGCCGAACG
TGAACTAGTCGCCACGAAATTGTTCCACCAGCCGCTCCCAGTTCATGCAT
CTCTCGAGATGCCGTTGTGTGCTTGCGGTCCGTGATTTGGACGGCTCGTG
AGGGTGATGTATTTTTCTCAAGACAAGTCTTCTACATACCCTCTCTGTTC
CAGCGCCAACATGCCGCCGAATTTGACGTGTTTGTTTGATCGAACAGTCG
CGGCGTGACTTTCCCTGTGTTTCGATGGGAGTGTGGAAGAATAGCATTTG
TTTTCTGTCACGATACCGTACGTAGCATCGGTACTGGTGCGAATAAATAG
GCTTGGCTGACTGGCCGCATTTGCGCTCTTCTCTATGCCAACCTTACAAA
TCCGTGCGAACTTCAGCGGAGCCAGAGGTGGCGGCGGGGATGACGTCTCT
AGCGCTGAGCGACGGTCGCAGGTCAGGCTCGAAATCGAGCTCTCGGGGAA
CCACGGGGAATGAAGTCAGGTATACCTGGTATATGTTTCGTGCGTTTGTT
TTGTTTGCCGGGTTGGATGCTGTGGCCGCGGCATATCTGCGTCGCCCAGG
TCGTGGTGTCTCGTTGGTTGGAAGCCCATCCCGTCGACGTACGTGCACGC
TTATTTGCGGCGAAACCGTGGGATCAGTGTTTCAGCTGAAATCGAGTGGT
GGGCGTGGTCTCTTTCGAGCGAGCTGCAAACGTTGTCGCTTGTGGTTGTC
TTGACGATGCGGCTTCAGAAAAAAACAGCACATGTACTGCTGTTTGGGAG
TCGTGCATGGCCGCGCAAATGCCTCGTGTGTCTGGGAAAACCCTCCCAGC
GGCTTCGTCAAATACTATTTAGACACTGGTATGTAACGATATAGCATTTT
CTAGCAGCAGGCAGGTAGGTGCCTTGTCACGTGACTCTCTCGCACGTGCG
GGGCCCCTTTTCTTTCTTGGGGCATCCAGATGAGCGCTTGAGCTGACGTC
TGCTACCGAATCCAACGGCTTGGGGTTAGAGAGAGAGAGAGAGAGAAAGA
GAGAGGGAGGGAGGGGGGGGGGCGGTACAGAGAGACAGACAGAGGCAGAG
AGACAGACAAAAGATAGAGGCTAGCAGAGAGACAGAGACAAAGACAGAGG
CAAGCAGAGAGACAGACAGACTGAGAGGGACATAGAATCTGTTTTGAGCC
CGAGACCTAACCTTCGCCGGTTGTCGTTGATGCGCATTTTTTTTTCCGGT
CACACTTGGAAACGAAGCAGCTCTGGCGGGGGCGGCGGTAGCCAGCAGCA
GCTGGTTACTGTGGAAGACGCGAGTCGGATGCTCGCTCCCCTTGTTGCCC
AAGAGGTCGAAAAGGAGACCAAAAAGATTGAGATCAGGATGCAGGTGCGT
GTGCGTGTGTTCGTTTCACCGCATCGACCGGGCTTTAGCTGGTTGGCCAA
TGAAACGACGCCAGTCTCCGTGCGGGTGTGTGTGTCCGCTCGTCCCATCT
GTTCTGGCGCCGGTTTGCAGGCCTTCGGCGCATGTACCTGATGTACCAGC
CGGGACCAAACAAGAGGAAGGTCACACAGCAGTGAAAACGGAAAATGTGT
GGTTGGGTGTTGGGTGCTGTCGGCTGTAAGCCCTTGCAGAGAGGCACGTG
CCTTCTTCCGTCGTGTGCGTGTGCGTACCGCGTACGGTTAGCGCTGTTAA
ATTAAGCACGCAGGAGCGTGGCAGTTATTGACAAAATTGATATAACATAG
CCTCGAAAAGAACAAGTATACGAATTTTAACAATATGTGTGGGCCCGGTT
CAGAAGCTCTTCTACACTCAAAACCTATGTGGCGGCCCATTTGTAGCATA
ACCCCAGGCACTAAGAACGCCAGCCTCGACCAGCACAAGAGGTCTTCAAC
TGCGGGCGCTTGCTGTCGTTTGTTATGCGCAAGGTTAGGTAGAAGCTCAC
ACGGTAGCCCCGCCATCGCGTAATTTCGTTGCCGTTCCTTAGTCTTCCCC
CCGCTTCGCTCATGACTCCGCTCCCAAAAATGATTCCTTGCAGCAGGAAA
GTATCCTTGAGATAATACCACCTCTGGCATTCGTTGTTGCATGATTTTCT
GCGGGGCGCCATGCCTCTGAACTCAGTAGCGTCCTCTTGAAAGCAGGGAC
TGCAGTGCTGTTTTGATGGTTCGTGTGAGGCTGAAGGATGTCTTTTTCGG
TCGCAAGGCAAACGTGTTTGGAGCGGGATGTGTGATTAGTATGTTTCGAA
GAAACTGTTTGTGAGACCAGCGGTTGTTGTCTGGCGTTGACCTACCACCA
TGAAACGCCAGCGCACCTACAGCAGTGGATCTCTGGTGAAGGACACACGT
GATTTTTCGTACAAGCTGGTGTCCCTAAGCCAGGGAAGTCTCCTTCGGAA
TGGTATCCCTCCTTACGTTGTACATTCGGCGGGGCACCATGCCTGTGGGA
GAAAGTTGTCGTTTCCCGGGGACAACTGTACTCTTAAAACGAAAATGGAG
GCAGTGCTCACGACCCCATTAGCAAGCACCCACACCCACCCACCCACGCT
TTTTTCTCCAGAACGAGATGAACTCAGCGTTGCGCACGATGAGGTCGGAT
ATGGAGGCTATCGACCGCGAGGGGCTGATGGCGCGGGTGGCCATGGAGAA
GCGCCTCAAGACGGGCATCAAGCGGCTGCTGGAGCGCATCGACCACCTGG
AGCGGCGGTTCTCCAAGCTCGAGCGGGAGGACCGGAAGCGACTCGCCCTG
GAAGCGGCTTCTTCGTCTTCCTCTGTAGCAGCAGCGCCGACGCCGCCACC
GCCGACGCCGGCCTTGGGGGGTGCCGCCGACGTTGTAGTCCGTCTGCAGT
CCCCCTCCTCGGCAAGCGAAACCTCGGCTGCCTTGACCAAGAGCAATCGC
GCGCCGGATACACCGGAGGCTCGGCCGCTCGTGACGTGGTCGGGAGGCGA
CGGGTATTTCAGCAGCACGGCCGGGTCAACCGCCGCCTCTTCTTGCGACG
GAGAGTACTCCGAAGCAGGGGATGACACGGAGGCGGACATCGTCCGGATG
CTCGAGGAGAAGATGGCGGCGCTGGAGGGAAAGCTCCTGGGCCACGAGGA
GCGGCAGCGCGCCGACCCGAGGGCCGCGGAAGGGCTGGGGATGACCCCCG
CAATGTGGGCTTGATCCGGTATCTATCAAGGAGGGGTATTTTTCCGGGGG
AGGGAGGGATCAACAACTAGCTCTCGATACGGGGAAGGGTTAAGGGAAGG
GTGAGGCCTGCCTCCGGTTGTTTGGGG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig96:20161..28787- >mRNA_Ecto-sp13_S_contig96.21213.1 ID=mRNA_Ecto-sp13_S_contig96.21213.1|Name=mRNA_Ecto-sp13_S_contig96.21213.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig96:20161..28787- (Ectocarpus species13 EcNAP12_S_4_19m) ATGAGCGCGCTGGACGTAAGAAATGGGAGGGTGGATATCGAGGTGCCAAC GGACGAGGACGCGAAGCATTGCGCTCGCGTGTTGAAGGATCAGCACTCCA GCCTCAAGTCCATCGATCTCAGGAGGGGTCTCGTGACGAGCGCGGGAGCC GGTGCTCTCTCCAAGGCGCTCAAAGGTAACTCAAGTCTGCGACACCTGGG CCTGCCGGGCAACAGCATCGGAGACGTCGGTGTTGGTGCTATAGGGCGCG CGTTGGAAGGAAACCTTGGGTGCGTCCTGGCGTCCGTAGACCTGTCTGCC ACAGGCATCACGGTGGTGGGGCTGTCTAACCTCGTGCAAGGGGTGTCCAG GCTGCCGAACCTGCATACGGTCTGCCTCAACGACAACAACCTTGCGCAAG AGGCCGGACTTCAGCTGTCGAACCTCCTAAAGGCAAGCACGTCGCTGCAC ACGGTGCTGGCCGGCGGGAACTATTTGGGAGACCGGGGGCTGGCGGCGCT GTGCGGTGCTTTCTGCTACCTCAAGCCGGCGAGGGTGCTCAGCCTGGACG TCAGCGGGAATGGTATCGGAGACCTCGGCGCCCAGTGGCTCTGTAAGGGC ATCTCCGCCCTGTGCCGCAACCAACAAGACACGGCCGGCGGCGGCAGCGG CAGCGGCATCCGCGACCTGCGCCTCCGAGGCAACAACATCACCCACACTG GCGCGAAAGAGCTCGCCACCATCCTCTCCGAGGACCGTTGCGCGCGCGAC CTGCGCGAGCTCGACCTGTCGATGAACACGATCACCGCGGACGGCTTCCG CCCCCTTGCCGTTTCGCTCCGTGGTTGCCGGGAGCTCGTCCGGCTGGACG TGGCCGGCTGCCGACTCGGCCCCGGAGGTGTGGACGCTGTCGCCGACCTC ATCGCCGCCTCTGGGCCGAAGCTCAGCGCCGTTGTTCTGACGCCCAAGGC GGAGTTCGCGGACCGAGTGCTGGGGGACCGGGGGGGGCTCGCGGTTGCGC TGCGGCAGTCCCTCCAGCGGCTGGCGGACTCGCTCCCGTTCGCCGGGAGC GTGGTGGAGGTAGGGCTCGGCGCCTTCCTCCGTGCGGACCCCGTCGCCGC GGCCAGCATTGAGGAGACCTTGCGCGAGCGCCGGGAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAAGCGCGAGAAGCACAATCGTCGGAGCGT AGCGCGAGAGAGGGGAGCAAACGAGGCACTGCTGCTGCGGTGGCGGCGGC GGGCCCTTCGAGATCGACCGAAAAGTCGCGGGCCGCCAACAGGACCGGCG GCGGCGGGGGGGGAGGTCGGAAGAGGGCCGAAGGGCCGAAGGCGTCGCCT GCCGCGGGGGGGCGGCGGGCTGGAGGGGGCACTGCCCCGCGCTCCGCCGG CGGCGACGGCGGGATTCCGACTACCCCGAGGACGTCTAACCGGTCCAACA ACAACCCCGGAGGCCGCTCGCGTCAGCAGCAGGGCATCGGCAAGAGCGGG GCGCGCGCGACGGCGGTCGAGCGGCCGAAAGCTGGCCTGGAGCGGCAGAA GGCGGCGAGCGGAACGGCGGAGCGGCAGCGGAGAGGGGCGGGGGGTCCGC GACCTTCTCCGCCGTCTGGAGGAGGTGTTGGAACAAGCGCGTCGTCCTCG GGACCCGGTGGCCTTCAACGGACGTCGAGCAAGGCGTCCATGCGAGGAGG CGGGGGAACCGGGGGAAAATCTGAAACCGGGCAACCGAGACAGGCGGTGG TGACGGGCCAGCACCACAAGACGACGGCGGCGACGCTTGCCGCTCGCGAT CGTGCCGCCGCCGGTGCCCACGCCGCCCCCCACAGGCGCTTGCACCAGGG GGAGGAGCTGGACTCGATCGAAGGGTTCACGGAGCCACGGCAATCTCCGA GGTCGATGCCGCCAACCCGGGAGTTGCTGGCGAGCCAGGCGGCCGCGGCG GCATTAGCAGCCGGTAGAGGTGGCAACACGGGCTTTTACGGTGACGGCGG CAGCGGGGGTAAGAAGGCGGCGGGGCCAGTGTCCTCGACAGGCGTGGAGG CCGCGGCCAGCGGGCGTGTCGTAGAATCGATCGCGGATGTGGTGTCCAAG GTGATGGGGGACACTGCGGCCGTGGCGGACGGTCTTGTAACGCCTCCTCC CGTCGCGCCTTCGACGTGGGATTGGGACAAGGATAGTGGTGGCCCTGCTG GGTCTGCGGCGGCGGGAAAGAAAGAGGACAACGATGCCGATGACTCCCCT TCTACTACGGCCAGCGGTGCTTCTACGATGGTTCCGTCTTCGGTTGGGCC GGTGTCGACGGGGCAGCAAGGAGGCGGGGCCAAGGCGGTGGCGCTGTCGC GGAAATCGTCGGCCGCGAGCTGTTCTACAGCACCCGAGTCGAGCTCGGAG CCAGAGGTGGCGGCGGGGATGACGTCTCTAGCGCTGAGCGACGGTCGCAG GTCAGGCTCGAAATCGAGCTCTCGGGGAACCACGGGGAATGAAGTCAGCT CTGGCGGGGGCGGCGGTAGCCAGCAGCAGCTGGTTACTGTGGAAGACGCG AGTCGGATGCTCGCTCCCCTTGTTGCCCAAGAGGTCGAAAAGGAGACCAA AAAGATTGAGATCAGGATGCAGAACGAGATGAACTCAGCGTTGCGCACGA TGAGGTCGGATATGGAGGCTATCGACCGCGAGGGGCTGATGGCGCGGGTG GCCATGGAGAAGCGCCTCAAGACGGGCATCAAGCGGCTGCTGGAGCGCAT CGACCACCTGGAGCGGCGGTTCTCCAAGCTCGAGCGGGAGGACCGGAAGC GACTCGCCCTGGAAGCGGCTTCTTCGTCTTCCTCTGTAGCAGCAGCGCCG ACGCCGCCACCGCCGACGCCGGCCTTGGGGGGTGCCGCCGACGTTGTAGT CCGTCTGCAGTCCCCCTCCTCGGCAAGCGAAACCTCGGCTGCCTTGACCA AGAGCAATCGCGCGCCGGATACACCGGAGGCTCGGCCGCTCGTGACGTGG TCGGGAGGCGACGGGTATTTCAGCAGCACGGCCGGGTCAACCGCCGCCTC TTCTTGCGACGGAGAGTACTCCGAAGCAGGGGATGACACGGAGGCGGACA TCGTCCGGATGCTCGAGGAGAAGATGGCGGCGCTGGAGGGAAAGCTCCTG GGCCACGAGGAGCGGCAGCGCGCCGACCCGAGGGCCGCGGAAGGGCTGGG GATGACCCCCGCAATGTGGGCTTGA back to top
|