prot_Ecto-sp13_S_contig95840.21199.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig95840.21199.1
Unique Nameprot_Ecto-sp13_S_contig95840.21199.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length97
Homology
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: A0A6H5L0V2_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V2_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 5.770e-22
Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 0
Query:   27 LIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            LIIWDE+ M+ +Y  EALD TLKDL++NDR FGG  +L SGDWRQ  P++K G+P++ V+ A +SSH WKH
Sbjct:   28 LIIWDELPMTHRYCVEALDRTLKDLMRNDRLFGGKTILFSGDWRQTGPIVKHGSPTDTVDAAVISSHRWKH 98          
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: A0A6H5JNR7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNR7_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.850e-17
Identity = 39/71 (54.93%), Postives = 53/71 (74.65%), Query Frame = 0
Query:   27 LIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            LI+WDEI MS ++S EAL+LTL+DL+ ND   GG  VL+SGD RQ+ PV+K G P+E ++ + +SS LW H
Sbjct:   82 LIVWDEIPMSHRFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPH 152          
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: A0A833W332_PHYIN (ATP-dependent DNA helicase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W332_PHYIN)

HSP 1 Score: 79.7 bits (195), Expect = 3.250e-16
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   26 SLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            SLI+WDE  M+ ++  EA+D TL+DLLKND+PFGG  +L+SG +RQ  PV+    P+E++  +   S LW+H
Sbjct:  140 SLIVWDEAPMTHRFQYEAVDRTLRDLLKNDKPFGGVTMLLSGVFRQTLPVIPRAGPAEVIAASLKKSTLWRH 211          
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: UPI001C3FBCBC (ATP-dependent DNA helicase PIF7-like n=2 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FBCBC)

HSP 1 Score: 81.6 bits (200), Expect = 5.240e-16
Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 0
Query:   26 SLIIWDEIVMSGKYSPEALDLTLKDLLKN-DRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            SLI+WDE  M+ +++ EA+D TL+D+L N   PFGG  V++SGD+RQ+ PV+K GTP++ V+  F SS LW H
Sbjct:  244 SLIVWDEAPMTHRFAFEAVDRTLRDILDNLHEPFGGKVVVLSGDFRQILPVVKKGTPADTVDACFKSSDLWSH 316          
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: UPI0010A34E83 (uncharacterized protein LOC114724484 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A34E83)

HSP 1 Score: 81.6 bits (200), Expect = 5.460e-16
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   27 LIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            LIIWDE  M  +Y  EA+D + KD++ +++PFGG C+LM GD+RQ+ PV+  GT + +V  +  SSHLW+H
Sbjct: 1109 LIIWDEAPMIQRYCIEAVDRSFKDIMHSNKPFGGKCMLMGGDFRQILPVIPKGTRAVVVNASISSSHLWRH 1179          
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: A0A6H5L0I5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I5_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.290e-16
Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 0
Query:   27 LIIWDEIVMSGKYSPEALDLTLK-DLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            LI+WDEI MS ++S EAL+LTL+ DLL ND   GG  VL+SGD RQ+ PV+K G P+E ++ + +SS LW H
Sbjct:  560 LIVWDEIPMSHRFSVEALNLTLQADLLGNDNIMGGKTVLLSGDLRQIGPVVKHGGPAETIDASLISSPLWPH 631          
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: A0A6H5JZJ6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ6_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 9.950e-16
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   27 LIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            LI+WDEI MS ++S EAL+LTL+DL+ ND   GG  VL+SGD RQ+ P +K G P+  ++ + +SS LW H
Sbjct:  397 LIVWDEIPMSHRFSVEALNLTLQDLMGNDNIMGGKTVLLSGDLRQIGPFIKHGGPAGTIDASLISSPLWPH 467          
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: UPI0010A2E642 (uncharacterized protein LOC114759678 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2E642)

HSP 1 Score: 80.5 bits (197), Expect = 1.390e-15
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 0
Query:   27 LIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            LIIWDE  M  +Y  EA+D T +D++K D+PFGG CV+M GD+RQ+ PV+  G  +++V+ +  SS LW H
Sbjct: 1037 LIIWDEAPMVRRYCVEAVDRTFRDIMKCDKPFGGKCVVMGGDFRQILPVVPKGGRADVVDSSINSSELWNH 1107          
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: UPI0010A354B4 (uncharacterized protein LOC114756596 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A354B4)

HSP 1 Score: 80.1 bits (196), Expect = 1.750e-15
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   27 LIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            LIIWDE  M  +Y  EA D TLKD++ ++ PFGG C++M GD+RQ+ PV+  GT + IV  +  SS+LW H
Sbjct:  332 LIIWDEAPMVQRYCIEAFDRTLKDIMHSNAPFGGKCIVMGGDFRQILPVIPKGTRATIVNASINSSYLWNH 402          
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Match: UPI00053FF0F2 (uncharacterized protein LOC104901240 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FF0F2)

HSP 1 Score: 80.1 bits (196), Expect = 1.820e-15
Identity = 32/72 (44.44%), Postives = 55/72 (76.39%), Query Frame = 0
Query:   26 SLIIWDEIVMSGKYSPEALDLTLKDLLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH 97
            ++IIWDE  M+ +Y  EA+D +L+DL++ND PFGG  ++  GD+RQV PV++ GT +++++ +F+ S +W+H
Sbjct:  282 TIIIWDEAPMTHRYQFEAVDRSLRDLMENDLPFGGKIIVFGGDFRQVLPVVRNGTRTQMIDASFVKSPIWRH 353          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig95840.21199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0V2_9PHAE5.770e-2259.15ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JNR7_9PHAE2.850e-1754.93ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A833W332_PHYIN3.250e-1648.61ATP-dependent DNA helicase n=1 Tax=Phytophthora in... [more]
UPI001C3FBCBC5.240e-1652.05ATP-dependent DNA helicase PIF7-like n=2 Tax=Callo... [more]
UPI0010A34E835.460e-1649.30uncharacterized protein LOC114724484 n=1 Tax=Proso... [more]
A0A6H5L0I5_9PHAE7.290e-1655.56ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JZJ6_9PHAE9.950e-1652.11ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI0010A2E6421.390e-1549.30uncharacterized protein LOC114759678 n=1 Tax=Proso... [more]
UPI0010A354B41.750e-1550.70uncharacterized protein LOC114756596 n=1 Tax=Proso... [more]
UPI00053FF0F21.820e-1544.44uncharacterized protein LOC104901240 n=1 Tax=Beta ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..94
e-value: 8.9E-6
score: 27.2
NoneNo IPR availablePANTHERPTHR10492UNCHARACTERIZEDcoord: 25..97
NoneNo IPR availablePANTHERPTHR10492:SF71coord: 25..97
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 24..97
e-value: 2.0E-19
score: 70.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig95840contigEcto-sp13_S_contig95840:3..293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig95840.21199.1mRNA_Ecto-sp13_S_contig95840.21199.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig95840 3..408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig95840.21199.1 ID=prot_Ecto-sp13_S_contig95840.21199.1|Name=mRNA_Ecto-sp13_S_contig95840.21199.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
MQQLKEVYATSRLNPRERMSSRTPLSLIIWDEIVMSGKYSPEALDLTLKD
LLKNDRPFGGTCVLMSGDWRQVAPVLKFGTPSEIVEHAFLSSHLWKH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like