prot_Ecto-sp13_S_contig9580.21194.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9580.21194.1
Unique Nameprot_Ecto-sp13_S_contig9580.21194.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length78
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9580.21194.1 vs. uniprot
Match: A0A6H5JH87_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH87_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.740e-6
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 0 
Query:   50 SPWVEIIGIALGISTGWYFRRRDVITKRE 78
            S   EIIGIALGISTGWYFRRRDVIT+RE
Sbjct:   12 STNTEIIGIALGISTGWYFRRRDVITERE 40
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9580.21194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JH87_9PHAE2.740e-686.21Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..68
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..78
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 13..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9580contigEcto-sp13_S_contig9580:983..2002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9580.21194.1mRNA_Ecto-sp13_S_contig9580.21194.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9580 983..2004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9580.21194.1 ID=prot_Ecto-sp13_S_contig9580.21194.1|Name=mRNA_Ecto-sp13_S_contig9580.21194.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp
FSRLRHKQAGRMLLLGRLLGRPVAAAIIEVDGGVDVYVLLRRCLVVAFSS
PWVEIIGIALGISTGWYFRRRDVITKRE
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