prot_Ecto-sp13_S_contig958.21192.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig958.21192.1
Unique Nameprot_Ecto-sp13_S_contig958.21192.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length77
Homology
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: D7G092_ECTSI (Smr domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G092_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 4.410e-49
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0
Query:    1 MGALAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDVQFAELSEHSTGGWG 76
            MGALAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDVQFA+LSEHSTGGWG
Sbjct:   52 MGALAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDVQFAKLSEHSTGGWG 127          
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: A0A6H5JKG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG2_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 5.570e-44
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    1 MGALAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDVQFAELSEHSTGGWG 76
            MGALA RGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDVQFAELSEHSTGGWG
Sbjct:  579 MGALAARGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDVQFAELSEHSTGGWG 654          
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: A0A024GR71_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GR71_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.790e-12
Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    4 LAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDV 62
            LAE GL  +R++TG GHHSKGP N ARLLPAVE F    GY ++ V D+  GHVG + V
Sbjct:  943 LAEDGLELIRIVTGAGHHSKGPQNTARLLPAVEQFLRSEGYEYKSVVDRK-GHVGMLQV 1000          
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: F0WYU9_9STRA (Uncharacterized protein AlNc14C400G11359 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WYU9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 6.960e-12
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    4 LAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDV 62
            LAE GL +VR++TGTGHHS+GP N ARLLPAVE+F    GY    V D+  G+VG + V
Sbjct:  481 LAEDGLDTVRIVTGTGHHSRGPQNTARLLPAVEHFLRTEGYESESVADRK-GYVGMLQV 538          
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: A0A8K1CIW3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIW3_PYTOL)

HSP 1 Score: 65.9 bits (159), Expect = 8.440e-11
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    4 LAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDV 62
            LA+ GL S+ ++TG+GHHSKGPT  ARLLPAVE F    GY F  V D+  G+VG + V
Sbjct:  466 LADDGLESIYLVTGSGHHSKGPTGNARLLPAVEQFLTAEGYRFSPVADRR-GYVGMLMV 523          
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: K3WV24_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WV24_GLOUD)

HSP 1 Score: 65.5 bits (158), Expect = 1.160e-10
Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    4 LAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDV 62
            LA+ GL ++ ++TG+GHHSKGP   ARLLPA+E F    GY F  VPD   G+VG + V
Sbjct:  554 LADEGLETIYLVTGSGHHSKGPQGNARLLPAIEQFLAAEGYQFSSVPD-GRGYVGMLLV 611          
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: A0A3M6VB56_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB56_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.600e-9
Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    4 LAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDV 62
            LA+ G+  + V+TG+GHHSKGP   ARLLPAVE F    GY F  V D   G VG + V
Sbjct:  535 LADEGVDEIYVVTGSGHHSKGPHGNARLLPAVERFLAAEGYQFTPVAD-GAGFVGMLLV 592          
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: A0A0W8DKZ9_PHYNI (Membrane metallo-endopeptidase 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DKZ9_PHYNI)

HSP 1 Score: 60.8 bits (146), Expect = 4.450e-9
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    4 LAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDV 62
            LA+ G+ S+ ++TG+GHHSKGP   ARLLPAVE F    GY +  V D++ G VG + V
Sbjct:  281 LADEGVDSIYLVTGSGHHSKGPDGNARLLPAVERFLAGEGYQYTPVADEA-GFVGMLLV 338          
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: A0A0W8C524_PHYNI (NEDD4-binding protein 2 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C524_PHYNI)

HSP 1 Score: 60.8 bits (146), Expect = 4.910e-9
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    4 LAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDV 62
            LA+ G+ S+ ++TG+GHHSKGP   ARLLPAVE F    GY +  V D++ G VG + V
Sbjct:  511 LADEGVDSIYLVTGSGHHSKGPDGNARLLPAVERFLAGEGYQYTPVADEA-GFVGMLLV 568          
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Match: D0MT46_PHYIT (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=D0MT46_PHYIT)

HSP 1 Score: 60.5 bits (145), Expect = 6.730e-9
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    4 LAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVPDQSTGHVGAIDV 62
            LA+ G+ S+ ++TG+GHHSKGP   ARLLPAVE F    GY +  V D S G VG + V
Sbjct:  535 LADEGVDSIYLVTGSGHHSKGPDGNARLLPAVERFLAGEGYQYTPVADGS-GFVGMLLV 592          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig958.21192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7G092_ECTSI4.410e-4998.68Smr domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JKG2_9PHAE5.570e-4498.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024GR71_9STRA2.790e-1257.63Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0WYU9_9STRA6.960e-1257.63Uncharacterized protein AlNc14C400G11359 n=1 Tax=A... [more]
A0A8K1CIW3_PYTOL8.440e-1155.93Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WV24_GLOUD1.160e-1052.54Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3M6VB56_9STRA3.600e-952.54Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A0W8DKZ9_PHYNI4.450e-950.85Membrane metallo-endopeptidase 1 n=1 Tax=Phytophth... [more]
A0A0W8C524_PHYNI4.910e-950.85NEDD4-binding protein 2 n=7 Tax=Phytophthora TaxID... [more]
D0MT46_PHYIT6.730e-952.54Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1370.110coord: 3..64
e-value: 7.1E-7
score: 31.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig958contigEcto-sp13_S_contig958:3380..4171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig958.21192.1mRNA_Ecto-sp13_S_contig958.21192.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig958 3380..4171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig958.21192.1 ID=prot_Ecto-sp13_S_contig958.21192.1|Name=mRNA_Ecto-sp13_S_contig958.21192.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp
MGALAERGLCSVRVLTGTGHHSKGPTNKARLLPAVENFCLIRGYLFRKVP
DQSTGHVGAIDVQFAELSEHSTGGWG*
back to top