prot_Ecto-sp13_S_contig95637.21173.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig95637.21173.1
Unique Nameprot_Ecto-sp13_S_contig95637.21173.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig95637.21173.1 vs. uniprot
Match: A0A6H5L4A3_9PHAE (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A3_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.280e-31
Identity = 98/107 (91.59%), Postives = 99/107 (92.52%), Query Frame = 0 
Query:    1 MSRARRKSAPGKPPADVLAXXXXXXXXXXXXXXXXXXXXXXXXXXS---LLLLSPAKGINCRQTPSNAACSTPGDDSAAAASPGSCTGVERCVTRSSGGGGTSCRAR 104
            MSRARRKSAPGKPPADVLA  XXXXXXXXXXXXXXXXXXXXXXXX    LLLLSPAKGINCRQT SNAACSTPGDD+AAA SPGSCTGVERCVTRSSGGGGTSCRAR
Sbjct:  473 MSRARRKSAPGKPPADVLAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLSPAKGINCRQTSSNAACSTPGDDAAAAPSPGSCTGVERCVTRSSGGGGTSCRAR 579
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig95637.21173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4A3_9PHAE1.280e-3191.59TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig95637contigEcto-sp13_S_contig95637:55..369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig95637.21173.1mRNA_Ecto-sp13_S_contig95637.21173.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig95637 40..434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig95637.21173.1 ID=prot_Ecto-sp13_S_contig95637.21173.1|Name=mRNA_Ecto-sp13_S_contig95637.21173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
MSRARRKSAPGKPPADVLAACAAAAAAADAASSSGKEDNDDGSTKSLLLL
SPAKGINCRQTPSNAACSTPGDDSAAAASPGSCTGVERCVTRSSGGGGTS
CRAR*
back to top