prot_Ecto-sp13_S_contig9559.21167.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9559.21167.1
Unique Nameprot_Ecto-sp13_S_contig9559.21167.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length270
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9559.21167.1 vs. uniprot
Match: D7FR34_ECTSI (4HBT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR34_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 9.150e-113
Identity = 172/184 (93.48%), Postives = 175/184 (95.11%), Query Frame = 0 
Query:   85 AAAASMSSEKRELRRVALAHLTKSIGTGAVTDNLNNQSQDSTVGVYEEGGGVGGTVALAAALLRPGEREDEEASQSDGGEEDTVPLPPNVHDVDKILVKTPLLRTDNAFHDTLNNDNGISCPFVLNRPDQDGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQNTGAVFTAYIKV 268
            AAAASMSSEKRELRRVALAHLTKS+  GAV DNL NQSQDSTVG YEEGGGVGGTVALAAALLRPGE EDEEA+QS GGE DTVPLPPNVHDVDKILVKTPLLR DNAFHDTLNND+GISCPFVLNRPDQDGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQNTGAVFTAYIKV
Sbjct:    3 AAAASMSSEKRELRRVALAHLTKSVRAGAVNDNLKNQSQDSTVGAYEEGGGVGGTVALAAALLRPGESEDEEANQSVGGEGDTVPLPPNVHDVDKILVKTPLLRNDNAFHDTLNNDSGISCPFVLNRPDQDGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQNTGAVFTAYIKV 186
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BLAST of mRNA_Ecto-sp13_S_contig9559.21167.1 vs. uniprot
Match: A0A835YMX9_9STRA (HotDog domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMX9_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.910e-22
Identity = 47/93 (50.54%), Postives = 63/93 (67.74%), Query Frame = 0 
Query:  176 DVDKILVKTPLLRTDNAFHDTLNNDNGISCPFVLNRPDQDGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQNTGAVFTAYIKV 268
            DVD++L   P  + D+ FHDTLN+  G+ CP+V    D+D   ++AVVRFG+   GHP +VHGG+T+LTFDNL G   FL+   AV TAY+ V
Sbjct:   97 DVDRLLATNPAYKRDHVFHDTLNHYQGVQCPYVTY--DRDSNSLKAVVRFGEQTRGHPNLVHGGITSLTFDNLLGWLQFLEGRMAVLTAYLHV 187
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BLAST of mRNA_Ecto-sp13_S_contig9559.21167.1 vs. uniprot
Match: A0A836CB13_9STRA (HotDog domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB13_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.130e-18
Identity = 45/95 (47.37%), Postives = 60/95 (63.16%), Query Frame = 0 
Query:  174 VHDVDKILVKTPLLRTDNAFHDTLNNDNGISCPFVLNRPDQDGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFGMALFLQNTGAVFTAYIKV 268
            +HDV  +L + P    D+  HDTLN  +G+ CP V +  D  G  ++AVVRFG+   GHP +VHGG+TALTFDNL G  +F+     V TAY+ V
Sbjct:    1 LHDVTDLLRRYPEYWRDHVLHDTLNYRHGVQCPVVSH--DSAGCRLQAVVRFGQQTRGHPDLVHGGITALTFDNLQGWCMFMDGRTNVLTAYLHV 93
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9559.21167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FR34_ECTSI9.150e-11393.484HBT domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YMX9_9STRA2.910e-2250.54HotDog domain-containing protein n=1 Tax=Tribonema... [more]
A0A836CB13_9STRA1.130e-1847.37HotDog domain-containing protein (Fragment) n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.129.10coord: 166..269
e-value: 3.0E-11
score: 45.5
NoneNo IPR availablePANTHERPTHR47260FAMILY NOT NAMEDcoord: 21..266
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 31..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..269
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 43..51
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 200..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9559contigEcto-sp13_S_contig9559:97..5397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9559.21167.1mRNA_Ecto-sp13_S_contig9559.21167.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9559 97..5397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9559.21167.1 ID=prot_Ecto-sp13_S_contig9559.21167.1|Name=mRNA_Ecto-sp13_S_contig9559.21167.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=270bp
MAFRCLLARGRHLSTSFLTWRYSTRQRTTSSAASAAAAAVAVPGSRTSVS
AIPGGLLLLTTMVVSWERESGEVQCDSVTDEEVMAAAASMSSEKRELRRV
ALAHLTKSIGTGAVTDNLNNQSQDSTVGVYEEGGGVGGTVALAAALLRPG
EREDEEASQSDGGEEDTVPLPPNVHDVDKILVKTPLLRTDNAFHDTLNND
NGISCPFVLNRPDQDGEGIEAVVRFGKSIAGHPKIVHGGVTALTFDNLFG
MALFLQNTGAVFTAYIKVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029069HotDog_dom_sf