prot_Ecto-sp13_S_contig954.21148.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig954.21148.1
Unique Nameprot_Ecto-sp13_S_contig954.21148.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length165
Homology
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BLAST of mRNA_Ecto-sp13_S_contig954.21148.1 vs. uniprot
Match: Q8QNA3_ESV1K (EsV-1-184 n=2 Tax=root TaxID=1 RepID=Q8QNA3_ESV1K)

HSP 1 Score: 83.2 bits (204), Expect = 1.910e-16
Identity = 52/160 (32.50%), Postives = 86/160 (53.75%), Query Frame = 0 
Query:    2 KQEVVYENYWTDSSLGLIENWYNKCEQAASDHTEAALRARRLNVRVALPSIILGAAATGLAFFSVGDEGNDTSQSEAT-AVSVSLAVLTSAFSVVGGMSSLFSLSERQSQHIAAAAGFSNLAKKIQVHLFLPMELRSQCEVVLTDISGEYTSLVTTSPLL 160
            ++E +Y+N W +S L L+EN   +C Q++  H EAA   RR    + +PSII+                           +   +A LT+   ++ G++S+++   + S++IAAA  F+NLA++ ++  FLP+ L+   EV LTDIS E   L ++SPLL
Sbjct:   78 QKEKLYQNDWNNSVLDLMENLLYECTQSSKAHAEAARGCRRKYRMLMIPSIIVAXXXXXXXXXXXXXXXXXXXXXXXXDGLKYVVASLTALVGIMSGIASVYNFKSKMSENIAAAGAFANLARRCKIICFLPIHLKPNSEVALTDISAEQAHLTSSSPLL 237
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig954.21148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNA3_ESV1K1.910e-1632.50EsV-1-184 n=2 Tax=root TaxID=1 RepID=Q8QNA3_ESV1K[more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..164
NoneNo IPR availableTMHMMTMhelixcoord: 43..65
NoneNo IPR availableTMHMMTMhelixcoord: 80..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig954contigEcto-sp13_S_contig954:17789..18283 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig954.21148.1mRNA_Ecto-sp13_S_contig954.21148.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig954 17789..18313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig954.21148.1 ID=prot_Ecto-sp13_S_contig954.21148.1|Name=mRNA_Ecto-sp13_S_contig954.21148.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=165bp
MKQEVVYENYWTDSSLGLIENWYNKCEQAASDHTEAALRARRLNVRVALP
SIILGAAATGLAFFSVGDEGNDTSQSEATAVSVSLAVLTSAFSVVGGMSS
LFSLSERQSQHIAAAAGFSNLAKKIQVHLFLPMELRSQCEVVLTDISGEY
TSLVTTSPLLYLGC*
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