prot_Ecto-sp13_S_contig95.21119.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig95.21119.1
Unique Nameprot_Ecto-sp13_S_contig95.21119.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length115
Homology
BLAST of mRNA_Ecto-sp13_S_contig95.21119.1 vs. uniprot
Match: A0A3B8JJF2_9CYAN (Tetratricopeptide repeat-containing protein (Fragment) n=1 Tax=Cyanobacteria bacterium UBA8553 TaxID=2055771 RepID=A0A3B8JJF2_9CYAN)

HSP 1 Score: 54.7 bits (130), Expect = 7.480e-8
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0
Query:   52 NSATLYTTACQGIYAEAEPLYAQCQAIFEKTLGSGHPNVATLLNNRAEM 100
            N A LY    QG Y++AEPLY +  AI+EK LGS HPNVAT LNN A++
Sbjct:    1 NLAALYKV--QGNYSQAEPLYQRSLAIWEKALGSEHPNVATSLNNLADL 47          
BLAST of mRNA_Ecto-sp13_S_contig95.21119.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.620e-7
Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 0
Query:   57 YTTACQGIYAEAEPLYAQCQAIFEKTLGSGHPNVATLLNNRAEML 101
            Y   CQG YAEA+PLY + QAI +K LG  HP+VAT+LNNRA +L
Sbjct:  200 YEYICQGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLL 244          
BLAST of mRNA_Ecto-sp13_S_contig95.21119.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.970e-7
Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = 0
Query:   62 QGIYAEAEPLYAQCQAIFEKTLGSGHPNVATLLNNRAEMLSKQM 105
            QG Y EAEPLY + QAI EK LG  HP+VA+ LNNR E+L  Q+
Sbjct:   18 QGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQV 61          
BLAST of mRNA_Ecto-sp13_S_contig95.21119.1 vs. uniprot
Match: A0A6H5JIH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH9_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 8.860e-7
Identity = 32/55 (58.18%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   49 SASNSATLYT------TACQGIYAEAEPLYAQCQAIFEKTLGSGHPNVATLLNNR 97
            S+S SA+ Y       TACQG YAE EPLY Q QAI EK LG  HP+VAT+L  R
Sbjct: 1260 SSSGSASRYLPWLSVRTACQGKYAEPEPLYEQSQAITEKVLGPEHPDVATVLKKR 1314          
BLAST of mRNA_Ecto-sp13_S_contig95.21119.1 vs. uniprot
Match: A0A6H5KHN5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN5_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 4.230e-6
Identity = 32/77 (41.56%), Postives = 41/77 (53.25%), Query Frame = 0
Query:   25 RHISGNGSAPHNEEKVIETTLGLNSASNSATLYTTACQGIYAEAEPLYAQCQAIFEKTLGSGHPNVATLLNNRAEML 101
            R +  NG+    E  +     GL              +G YAEAE LYAQCQAI EK LG  HP++AT L+N A++L
Sbjct: 1735 RGVEDNGNTESREASLRSAKAGLGCV--------LGLKGKYAEAEALYAQCQAIEEKVLGPEHPSLATTLHNLADLL 1803          
BLAST of mRNA_Ecto-sp13_S_contig95.21119.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 6.100e-5
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 0
Query:   62 QGIYAEAEPLYAQCQAIFEKTLGSGHPNVATLLNNRAEMLSKQMR 106
            QG +AEA+PLY +   + EK LG  HP++AT +NNRAE+L  Q R
Sbjct:  340 QGKHAEADPLYLRAIEVAEKMLGRDHPDLATSINNRAELLRAQAR 384          
BLAST of mRNA_Ecto-sp13_S_contig95.21119.1 vs. uniprot
Match: A0A6H5KDX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX1_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 8.200e-5
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0
Query:   62 QGIYAEAEPLYAQCQAIFEKTLGSGHPNVATLLNNRAEMLSKQ 104
            +G Y+EAEPL+ Q QAI+EK LG  HP+VA  LNN A  L  Q
Sbjct:  159 KGKYSEAEPLFKQTQAIYEKVLGPEHPHVAQSLNNPAVFLEDQ 201          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig95.21119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A3B8JJF2_9CYAN7.480e-859.18Tetratricopeptide repeat-containing protein (Fragm... [more]
A0A6H5K5H9_9PHAE1.620e-762.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3K8_9PHAE1.970e-761.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIH9_9PHAE8.860e-758.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHN5_9PHAE4.230e-641.56CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KSC7_9PHAE6.100e-553.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX1_9PHAE8.200e-558.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 52..104
e-value: 9.3E-8
score: 32.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 37..110
e-value: 7.0E-11
score: 43.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig95contigEcto-sp13_S_contig95:29562..29906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig95.21119.1mRNA_Ecto-sp13_S_contig95.21119.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig95 29519..30134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig95.21119.1 ID=prot_Ecto-sp13_S_contig95.21119.1|Name=mRNA_Ecto-sp13_S_contig95.21119.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=115bp
MRKKHFSAVVDQCFCWIPTLWCIVRHISGNGSAPHNEEKVIETTLGLNSA
SNSATLYTTACQGIYAEAEPLYAQCQAIFEKTLGSGHPNVATLLNNRAEM
LSKQMRDVYQFEDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf