prot_Ecto-sp13_S_contig9492.21113.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9492.21113.1
Unique Nameprot_Ecto-sp13_S_contig9492.21113.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length605
Homology
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: UPI001F1F2B9F (hypothetical protein n=1 Tax=Sinobacterium norvegicum TaxID=1641715 RepID=UPI001F1F2B9F)

HSP 1 Score: 63.5 bits (153), Expect = 1.070e-8
Identity = 39/121 (32.23%), Postives = 53/121 (43.80%), Query Frame = 0
Query:  434 HVHGAACGHRAVLHENHVDFLREGGQLECYAGKERIGGDWVSVIKEGGXXXXXXCGCDDSSKKESNGPGKPTN-ALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGRLLH 553
            H HG+ CGH A+ H +H+D+L +G     + G                        CD+ S + SN     TN A  H            C  + HGP CGHE + HD H D++V+GRL H
Sbjct:   12 HTHGSNCGHTAIRHGDHIDYLADGKLHHPHGGH-----------------------CDEHSIELSN-----TNPAQCH--------PTQGCAGHVHGPDCGHEAIQHDDHTDFIVDGRLHH 96          
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: A0A7C4BV65_9BACT (Uncharacterized protein n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7C4BV65_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 2.320e-8
Identity = 37/124 (29.84%), Postives = 47/124 (37.90%), Query Frame = 0
Query:  431 AKVHVHGAACGHRAVLHENHVDFLREGGQLECYAGKERIGGDWVSVIKEGGXXXXXXCGCDDSSKKESNGPGKPTNALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGRLLHP 554
            A  H+HG  CGH+AVLH +HVD+L +G                VS    G       CG  + +                                 HGP CGHE + H  H+DY+V G L HP
Sbjct:   10 AHAHIHGPGCGHKAVLHGDHVDYLHDGXXXXXXXXXXDEHAIEVSARNPGVCTPQHACGAHEPAHV-------------------------------HGPGCGHEAIPHGDHVDYLVAGHLHHP 102          
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: UPI000A05AADA (hypothetical protein n=1 Tax=Coraliomargarita akajimensis TaxID=395922 RepID=UPI000A05AADA)

HSP 1 Score: 61.6 bits (148), Expect = 5.330e-8
Identity = 37/121 (30.58%), Postives = 52/121 (42.98%), Query Frame = 0
Query:  434 HVHGAACGHRAVLHENHVDFLREGGQLECYAGKERIGGDWVSVIKEGGXXXXXXCGCDDSSKKESNGPGKPTNALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGRLLHP 554
            H HG  CGH A+ H +HVD+L + G L        +    ++V                    +++ P    N   H DG            + HGP CGHE + H  H+DY+V+GRL HP
Sbjct:   11 HQHGKGCGHTAIQHGDHVDYLHD-GHLHHQNADGTVEKHILAV--------------------DASHPSGCCNHATHSDG------------HVHGPDCGHEAIQHGDHIDYIVDGRLHHP 98          
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: A0A380MVT5_9GAMM (Uncharacterized protein n=1 Tax=Suttonella indologenes TaxID=13276 RepID=A0A380MVT5_9GAMM)

HSP 1 Score: 62.0 bits (149), Expect = 6.840e-8
Identity = 44/129 (34.11%), Postives = 57/129 (44.19%), Query Frame = 0
Query:  434 HVHGAACGHRAVLHENHVDFLREGGQL--------ECYAGKERIGGDWVSVIKEGGXXXXXXCGCDDSSKKESNGPGKPTNALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGRLLHP 554
            HVHG  CGH A+ H +HVD+L              E Y        D  + +K+ G       GCD   +          N   H + A+    R+      HGP+CGHE V H  H+DY+VNGRL HP
Sbjct:   11 HVHGKDCGHTAIQHGDHVDYLXXXXXXXXXXXXXXEHYLEVNAQNPDQCTAMKDCGCV----AGCDXXCEAG--------NCDCHQN-AQGCHDREHV----HGPNCGHEAVPHGDHVDYLVNGRLHHP 122          
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: A0A0K1NBC6_9BURK (Uncharacterized protein n=2 Tax=unclassified Ottowia TaxID=2645081 RepID=A0A0K1NBC6_9BURK)

HSP 1 Score: 61.6 bits (148), Expect = 7.000e-8
Identity = 39/121 (32.23%), Postives = 51/121 (42.15%), Query Frame = 0
Query:  434 HVHGAACGHRAVLHENHVDFLREGGQLECYAGKERIGGDWVSVIKEGGXXXXXXCGCDDSSKKESNGPGKPTNALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGRLLHP 554
            H HG  CGH A+ H  HVD+L+EG     + G+ +     VS                     ++N  G       H  G            + HGP CGHE V H  H+D++VNGRL HP
Sbjct:   21 HQHGPGCGHTAIRHNGHVDYLQEGHLHHPHEGRVQEHSIAVS---------------------DTNPEGCTPPCAGHEPG------------HVHGPGCGHEAVPHGNHIDFLVNGRLHHP 108          
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: A0A6I7Q8Z0_9BACT (Uncharacterized protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7Q8Z0_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 7.840e-8
Identity = 39/136 (28.68%), Postives = 53/136 (38.97%), Query Frame = 0
Query:  423 TRKDGLVGAKVHVHGAACGHRAVLHENHVDFLREGGQLECYAGKERIGGDWVSVI-----KEGGXXXXXXCGCDDSSKKESNGPGKPTNALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGRLLH 553
            T++  + G   H H  ACGH  + HE+H+D+L +G   E +   +   G WV  +     K         CGC                                    NH   CGHE+V H  H+DY+VNGRL H
Sbjct:    5 TKEHAVKGDHSHQHSIACGHTKIKHEDHIDYLHDG---ELHREND---GKWVKCVIPVTEKNPAESKTLPCGC------------------------------------NHTDACGHEMVPHGDHMDYLVNGRLHH 98          
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: UPI000A84D30B (hypothetical protein n=1 Tax=Candidatus Thiosymbion oneisti TaxID=589554 RepID=UPI000A84D30B)

HSP 1 Score: 61.2 bits (147), Expect = 8.440e-8
Identity = 38/123 (30.89%), Postives = 50/123 (40.65%), Query Frame = 0
Query:  434 HVHGAACGHRAVLHENHVDFLREGGQLECYAGKERIGGDWVSVIKEGGXXXXXXCGCDDSSKKESNGPGKPTNALVHWDGARFDRTRDRCESNNH--GPHCGHEVVHHDGHLDYVVNGRLLHP 554
            H HG  CGHRAV H +H+D+L +G     +    R+  D    + E G      CG                             T   C+   H  G  CGHE + H  H+DY+V+GRL HP
Sbjct:   13 HEHGPGCGHRAVRHGDHIDYLHDGHLHHAHELDNRVHYD--EHVIEVGTSNPDGCG----------------------------HTTTTCQKTGHVHGLGCGHEAIPHGDHVDYIVDGRLHHP 105          
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: UPI00197BFA9B (hypothetical protein n=1 Tax=Pirellula sp. SH-Sr6A TaxID=1632865 RepID=UPI00197BFA9B)

HSP 1 Score: 60.8 bits (146), Expect = 1.070e-7
Identity = 41/121 (33.88%), Postives = 53/121 (43.80%), Query Frame = 0
Query:  434 HVHGAACGHRAVLHENHVDFLREGGQLECYAGKERIGGDWVSVIKEGGXXXXXXCGCDDSSKKESNGPGKPTNALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGRLLHP 554
            H HGA CGH A+ HE+HVD+L + G L   AG   +    +SV              D +    + G     +A  H                 HGP CGHE V H  H+DY+V+G L HP
Sbjct:   10 HQHGAQCGHTAIKHEDHVDYLHD-GHLHHPAGAGCVEEHSLSVS-------------DTNPDDCTGGHTCSGHAADHV----------------HGPGCGHEAVPHGDHIDYLVDGHLHHP 100          
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: A0A2P7RVL7_9HYPH (Uncharacterized protein n=1 Tax=Mesorhizobium soli TaxID=1295366 RepID=A0A2P7RVL7_9HYPH)

HSP 1 Score: 60.8 bits (146), Expect = 1.100e-7
Identity = 41/123 (33.33%), Postives = 52/123 (42.28%), Query Frame = 0
Query:  431 AKVHVHGAACGHRAVLHENHVDFLREGGQLECYAGKERIGGDWVSVIKEGGXXXXXXCGCDDSSKKESNGPGKPTNALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGRLLH 553
            A+ H HG  CGH A+ H  H+D+LR+ G LE   GK         VI+             D +    +   + T A  H                 HGP CGHE V H  H+DY+V GRL H
Sbjct:    8 AEPHRHGPGCGHTAIRHHGHLDYLRD-GHLEHPHGKSND----EHVIE-----------VSDQNPDRCSPEHRCTGAAGHV----------------HGPGCGHEAVPHGDHVDYIVEGRLQH 98          
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Match: UPI001EF60D7A (hypothetical protein n=1 Tax=Photobacterium sp. OFAV2-7 TaxID=2917748 RepID=UPI001EF60D7A)

HSP 1 Score: 60.5 bits (145), Expect = 1.290e-7
Identity = 41/120 (34.17%), Postives = 53/120 (44.17%), Query Frame = 0
Query:  434 HVHGAACGHRAVLHENHVDFLREGGQLECYAGKERIGGDWVSVIKEGGXXXXXXCGCDDSSKKESNGPGKPTNALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGRLLH 553
            HVHG+ CGH A+ H +HVD+L +G     +       GD                 CD+   + S       NA VH            C  + HGP CGHE V H  H+DY+V+GRL H
Sbjct:   12 HVHGSDCGHTAIRHGDHVDYLVDGVLHHPH-------GDH----------------CDEHVIEISGSNPNKCNA-VH-----------SCGEHVHGPGCGHEAVKHGDHIDYIVDGRLHH 96          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9492.21113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F1F2B9F1.070e-832.23hypothetical protein n=1 Tax=Sinobacterium norvegi... [more]
A0A7C4BV65_9BACT2.320e-829.84Uncharacterized protein n=1 Tax=Bryobacteraceae ba... [more]
UPI000A05AADA5.330e-830.58hypothetical protein n=1 Tax=Coraliomargarita akaj... [more]
A0A380MVT5_9GAMM6.840e-834.11Uncharacterized protein n=1 Tax=Suttonella indolog... [more]
A0A0K1NBC6_9BURK7.000e-832.23Uncharacterized protein n=2 Tax=unclassified Ottow... [more]
A0A6I7Q8Z0_9BACT7.840e-828.68Uncharacterized protein n=1 Tax=Balneolaceae bacte... [more]
UPI000A84D30B8.440e-830.89hypothetical protein n=1 Tax=Candidatus Thiosymbio... [more]
UPI00197BFA9B1.070e-733.88hypothetical protein n=1 Tax=Pirellula sp. SH-Sr6A... [more]
A0A2P7RVL7_9HYPH1.100e-733.33Uncharacterized protein n=1 Tax=Mesorhizobium soli... [more]
UPI001EF60D7A1.290e-734.17hypothetical protein n=1 Tax=Photobacterium sp. OF... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 265..292
NoneNo IPR availableCOILSCoilCoilcoord: 180..207
NoneNo IPR availableGENE3D3.30.160.60coord: 42..69
e-value: 3.5E-8
score: 35.2
NoneNo IPR availableGENE3D3.30.160.60coord: 5..41
e-value: 1.2E-9
score: 39.8
NoneNo IPR availablePANTHERPTHR24390FAMILY NOT NAMEDcoord: 9..226
NoneNo IPR availablePANTHERPTHR24390:SF70FEZ FAMILY ZINC FINGER PROTEIN 1coord: 9..226
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 45..68
e-value: 2.1E-4
score: 30.6
coord: 14..38
e-value: 0.44
score: 19.6
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 14..38
e-value: 0.0037
score: 17.6
coord: 45..68
e-value: 1.1E-5
score: 25.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 16..38
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 47..68
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 14..43
score: 12.612
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 45..73
score: 11.843
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 10..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9492contigEcto-sp13_S_contig9492:3..2463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9492.21113.1mRNA_Ecto-sp13_S_contig9492.21113.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9492 3..2463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9492.21113.1 ID=prot_Ecto-sp13_S_contig9492.21113.1|Name=mRNA_Ecto-sp13_S_contig9492.21113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=605bp
MGVCQIGLAGEKPYACVHPLCGRKFARISDLRSHERTHNADAKSFECKLC
GKRFTRPYDLKKHVMNIHQQPSSSSKKRKNPPSTRSNADASASGGVTNRT
MSGGGTKRRRTTVVAPTGATVEVKASKPLVHVEKQPNPIAVESSRPLQCT
AAEAFDNPLFNGLAFAVQQQLQKQPQWQEYQKWQQQQQQQQQQQQQQEQQ
QQQEQQQPPPQQQHPPQQQQQQQQQQQQQQSHHQQQKQLHPQQPQPQPQQ
QSQQQQKKPQQQQPRQQQQQQHKQQQQQQQQQQQQQQQQQQQPQQPQQPH
QQQPQQQLPPPPPQQQQQPPPQQQQPQQLTEVLGLVGDSSLPPLPQSASV
PPDSLLAKPVAVPHRRYRRKRVRCDAHRHCSPIAASTEVLDVHGSASVIN
GPGESAPDGSITQHSAERPHGQTRKDGLVGAKVHVHGAACGHRAVLHENH
VDFLREGGQLECYAGKERIGGDWVSVIKEGGGGGAASCGCDDSSKKESNG
PGKPTNALVHWDGARFDRTRDRCESNNHGPHCGHEVVHHDGHLDYVVNGR
LLHPVAAPALAFDGDSNGIDDSSGRKGREAAPMFEDHGSIQALNDDFLTF
WSGLD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf