prot_Ecto-sp13_S_contig9452.21064.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9452.21064.1
Unique Nameprot_Ecto-sp13_S_contig9452.21064.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length177
Homology
BLAST of mRNA_Ecto-sp13_S_contig9452.21064.1 vs. uniprot
Match: A0A6H5L2M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2M4_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 1.070e-118
Identity = 166/176 (94.32%), Postives = 169/176 (96.02%), Query Frame = 0
Query:    1 MFWSRRSSSCLVLLAAALVGITPGSEGFLGAPRFAVAAGRSGTAGKRGCCRTTSARQGGQVIVAANSGDSEDTAATGGDVHVVSASTATSTCRNCKQQFNPDDNVDGSCSYHPGLVSGRLNRINDVDTSGLEYFWSCCGETDPFHPGCVKGKHASYDDPPEGGDGAWRSPLTGTLR 176
            MFW RRS+SCLVLLAAALVGITPGSEGFLGAPR AVAAGRSGTAG+RGCCRTTSARQGGQVIVAANS D EDTAATGGDVH+VSASTATSTCRNCKQQFNPDDNVDGSCSYHPGL SGRLNRINDVDTSGLEYFWSCCGETDP HPGCV GKHASYDDPPEGGDGAWRSPLTGTLR
Sbjct:    1 MFWLRRSASCLVLLAAALVGITPGSEGFLGAPRSAVAAGRSGTAGRRGCCRTTSARQGGQVIVAANSRDGEDTAATGGDVHLVSASTATSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVNGKHASYDDPPEGGDGAWRSPLTGTLR 176          
BLAST of mRNA_Ecto-sp13_S_contig9452.21064.1 vs. uniprot
Match: D7G2H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H8_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 1.970e-110
Identity = 158/176 (89.77%), Postives = 162/176 (92.05%), Query Frame = 0
Query:    1 MFWSRRSSSCLVLLAAALVGITPGSEGFLGAPRFAVAAGRSGTAGKRGCCRTTSARQGGQVIVAANSGDSEDTAATGGDVHVVSASTATSTCRNCKQQFNPDDNVDGSCSYHPGLVSGRLNRINDVDTSGLEYFWSCCGETDPFHPGCVKGKHASYDDPPEGGDGAWRSPLTGTLR 176
            MFWSRRS+SCLVLLAAALVG+TPGSEGFLGAP+FAVAAGRSG  G RGCCRTT ARQGGQV+VA  SGD E TAATGGDV  V  STATSTCRNCKQQFNPDDNVDGSCSYHPGL SGRLNRINDVDTSGLEYFWSCCGETDP HPGCVKGKHASYDDPPEGGDGAWRSPLTGTLR
Sbjct:   96 MFWSRRSASCLVLLAAALVGVTPGSEGFLGAPQFAVAAGRSGMTGTRGCCRTTGARQGGQVVVATKSGDGEATAATGGDV--VRTSTATSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDDPPEGGDGAWRSPLTGTLR 269          
BLAST of mRNA_Ecto-sp13_S_contig9452.21064.1 vs. uniprot
Match: A0A0G4GZ08_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZ08_VITBC)

HSP 1 Score: 112 bits (280), Expect = 1.760e-26
Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 0
Query:   91 TCRNCKQQFNPDDNVDGSCSYHPGLVSGRLNRINDVDTSGLEYFWSCCGETDPFHPGCVKGKHASYDDPPEGGDGAWRSPLTG 173
            TCR CK+ F P+ N   +C YH G+ SGRLNR+NDVDTS LE+FWSCCGE D  HPGCV  +H S+D+  +     WRSP+TG
Sbjct:  264 TCRQCKRSFVPEHNHSLACCYHAGVFSGRLNRVNDVDTSDLEFFWSCCGEYDREHPGCVVTRHMSFDEADDAT--TWRSPMTG 344          
BLAST of mRNA_Ecto-sp13_S_contig9452.21064.1 vs. uniprot
Match: A0A0G4H9F9_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H9F9_9ALVE)

HSP 1 Score: 107 bits (268), Expect = 2.470e-26
Identity = 51/98 (52.04%), Postives = 59/98 (60.20%), Query Frame = 0
Query:   78 GDVHVVSASTATSTCRNCKQQFNPDDNVDGSCSYHPGLVSGRLNRINDVDTSGLEYFWSCCGETDPFHPGCVKGKHASYDDPPEGGDGAWRSPLTGTL 175
            GD    S S   STCR CK+ F    N +  C +HPG  +GRLNR+NDVDTS LE+FWSCCGE D  HPGC    H SYDD     +G   S LTG +
Sbjct:   80 GDSAPSSLSEPESTCRQCKKPFLKSQNAETGCVFHPGFYTGRLNRVNDVDTSDLEFFWSCCGEYDRGHPGCTNTHHVSYDD-----EGPTWSVLTGKI 172          
BLAST of mRNA_Ecto-sp13_S_contig9452.21064.1 vs. uniprot
Match: A0A1X6PJI3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJI3_PORUM)

HSP 1 Score: 101 bits (252), Expect = 3.430e-24
Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   92 CRNCKQQFNPDDNVDGSCSYHPGLVSGRLNRINDVDTSGLEYFWSCCGETDPFHPGCVKGKHASYDD 158
            CR CKQQ++P+ N  GSC YH     GRLNRI   +TSGLEYFW CCG+TD    GCVK +H+SYDD
Sbjct:   89 CRQCKQQYDPEANEPGSCRYHGAQYRGRLNRIEPTETSGLEYFWHCCGDTDVNAEGCVKARHSSYDD 155          
BLAST of mRNA_Ecto-sp13_S_contig9452.21064.1 vs. uniprot
Match: W7TLU8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLU8_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.370e-21
Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   89 TSTCRNCKQQFNPDDNVDGSCSYHPGLVSGRLNRINDVDTSGL-EYFWSCCGETDPFHPGCVKGKHASYDDPPEGGDGAWRS 169
            T TCR C +QFNP +N   +C++HPG+ +GRL RI+D D SG  ++FWSCCG  +  HPGC    H S+DDPP    G W+S
Sbjct:   82 TKTCRACLKQFNPSENPPSACTFHPGIYTGRLARIDDTDPSGAKDFFWSCCGG-EREHPGCTHDHHRSFDDPP----GPWQS 158          
BLAST of mRNA_Ecto-sp13_S_contig9452.21064.1 vs. uniprot
Match: A0A7S1TIL7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIL7_9RHOD)

HSP 1 Score: 93.6 bits (231), Expect = 1.630e-21
Identity = 39/67 (58.21%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   92 CRNCKQQFNPDDNVDGSCSYHPGLVSGRLNRINDVDTSGLEYFWSCCGETDPFHPGCVKGKHASYDD 158
            CR CK Q++P  N   SC  H G  SGRLNR+NDVDTS LEYFW+CCGE      GC  G H SYD+
Sbjct:   48 CRLCKGQYDPGQNTGRSCRRHSGYYSGRLNRVNDVDTSDLEYFWNCCGEESKHAHGCEWGHHVSYDE 114          
BLAST of mRNA_Ecto-sp13_S_contig9452.21064.1 vs. uniprot
Match: A0A1Y1IN21_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IN21_KLENI)

HSP 1 Score: 66.6 bits (161), Expect = 3.520e-11
Identity = 27/78 (34.62%), Postives = 36/78 (46.15%), Query Frame = 0
Query:   91 TCRNCKQQFNPDDNVDGSCSYHPGLVSGRLNR----------INDVDTSGLEYFWSCCGETDPFHPGCVKGKHASYDD 158
            TC+ CKQQ++P+ N   +C YH     G   R          +   D   +  +W CCG  DP  PGC    H SYD+
Sbjct:   30 TCKQCKQQYDPESNHPRACKYHTAHYGGETRRKFESVYEGGTLTTADGGKITAYWHCCGNQDPTDPGCEAAPHRSYDE 107          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9452.21064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L2M4_9PHAE1.070e-11894.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2H8_ECTSI1.970e-11089.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4GZ08_VITBC1.760e-2657.83Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4H9F9_9ALVE2.470e-2652.04Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A1X6PJI3_PORUM3.430e-2461.19Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
W7TLU8_9STRA1.370e-2151.22Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S1TIL7_9RHOD1.630e-2158.21Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1Y1IN21_KLENI3.520e-1134.62Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35106FAMILY NOT NAMEDcoord: 78..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..37
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.728
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9452contigEcto-sp13_S_contig9452:2758..4431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9452.21064.1mRNA_Ecto-sp13_S_contig9452.21064.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9452 2461..4556 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9452.21064.1 ID=prot_Ecto-sp13_S_contig9452.21064.1|Name=mRNA_Ecto-sp13_S_contig9452.21064.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp
MFWSRRSSSCLVLLAAALVGITPGSEGFLGAPRFAVAAGRSGTAGKRGCC
RTTSARQGGQVIVAANSGDSEDTAATGGDVHVVSASTATSTCRNCKQQFN
PDDNVDGSCSYHPGLVSGRLNRINDVDTSGLEYFWSCCGETDPFHPGCVK
GKHASYDDPPEGGDGAWRSPLTGTLR*
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