prot_Ecto-sp13_S_contig9410.21008.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9410.21008.1
Unique Nameprot_Ecto-sp13_S_contig9410.21008.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length206
Homology
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 7.410e-55
Identity = 111/174 (63.79%), Postives = 120/174 (68.97%), Query Frame = 0
Query:   39 KWKVGVLDEMVLRLKVQHVVEAQRHLQKEVLDKVQGSRSQHRAYARVGSVPEIVEGDYVLMAGVRRRGFTPKILITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRFDADAALEITAELKETFQHAFAQDRGYVGG-------EDGPGFDVEVEWVRFRQRRQTWEKLS 205
            +WKV VLDE  LRLKVQHVVEAQRHL KEVLDKVQ SRS+HRA ARVGS+P+ V GDYV                       +VAAER  VYGVQNIVSGEVR+VHVARLRF ADAALEITAELKE FQHAF Q    +         EDGPGFDVEVEWV F +   TWE+LS
Sbjct: 1543 EWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYV-----------------------IVAAERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPGFDVEVEWVGFDKEENTWEELS 1693          
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.120e-44
Identity = 80/175 (45.71%), Postives = 111/175 (63.43%), Query Frame = 0
Query:   38 DKWKVGVLDEMVLRLKVQHVVEAQRHLQKEVLDKVQGSRSQHRAYARVGSVPEIVEGDYVLMAGVRRRGFTPKILITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRFDADAALEITAELKETFQHAFAQDRGYVGG-------EDGPGFDVEVEWVRFRQRRQTWEKLS 205
            + W +  LD   L+ +VQ+V++ Q  L K++  KV  +R++ RA A  G +P    GDYV++A VRR G TPK+  TW GPWRVV+A +  VYGVQNIV+G+VR+VHVARLRF AD+ L +T++LK+ FQH+F Q    +          DG G+ V V W  F +   TW+ LS
Sbjct:  217 EAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLS 391          
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 8.980e-43
Identity = 81/175 (46.29%), Postives = 111/175 (63.43%), Query Frame = 0
Query:   38 DKWKVGVLDEMVLRLKVQHVVEAQRHLQKEVLDKVQGSRSQHRAYARVGSVPEIVEGDYVLMAGVRRRGFTPKILITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRFDADAALEITAELKETFQHAFAQDRGYVGG-------EDGPGFDVEVEWVRFRQRRQTWEKLS 205
            + W +  LD   L+ +VQ+V++ Q  L K+V  KV  +R++ RA A  G +P    GDYV++A VRR G TPK+  TW GPWRVV+A +  VYGVQNIV+G+VR+VHVARLRF AD+ L +T++LK+ FQH+F Q    +          DG G+ V V W  F +   TW+ LS
Sbjct: 1440 EAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLS 1614          
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 3.470e-38
Identity = 67/133 (50.38%), Postives = 86/133 (64.66%), Query Frame = 0
Query:   80 RAYARVGSVPEIVEGDYVLMAGVRRRGFTPKILITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRFDADAALEITAELKETFQHAFAQDRGYVGG-------EDGPGFDVEVEWVRFRQRRQTWEKLS 205
            RA A  G +P    GDYV++A VRR G TPK+  TW GPWRVV+A +  VYGVQNIV+G+VR+VHVARLRF AD+ L +T++LK+ FQH+F Q    +          DG G+ V V W  F +   TW+ LS
Sbjct:    4 RAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSGYLVRVRWAGFEEDEDTWQPLS 136          
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A6H5LBX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBX7_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 2.260e-20
Identity = 43/61 (70.49%), Postives = 50/61 (81.97%), Query Frame = 0
Query:  113 ITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRFDADAALEITAELKETFQHAFAQD 173
            +TW GPWR+VAA RP V GVQNIV GE R+VHVARLRF ADA+LEITA  K+ F+HAF Q+
Sbjct:    1 MTWTGPWRIVAAVRPHVCGVQNIVWGEDRDVHVARLRFYADASLEITAGSKDVFKHAFTQE 61          
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A6H5L994_9PHAE (Chromo domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L994_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.290e-20
Identity = 46/75 (61.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query:  138 GEVRNVHVARLRFDADAALEITAELKETFQHAFAQDRGYVGG-------EDGPGFDVEVEWVRFRQRRQTWEKLS 205
            GEVR+VHV RLRF ADAALEITAEL + FQHAF Q    +         EDGPGFDVEVEWV F +    WE+LS
Sbjct:    4 GEVRDVHVKRLRFYADAALEITAELNDDFQHAFTQGAFEMAAIVDVSESEDGPGFDVEVEWVGFDKDENIWEELS 78          
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A6G0ML56_9STRA (Chromo domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0ML56_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.060e-9
Identity = 43/143 (30.07%), Postives = 76/143 (53.15%), Query Frame = 0
Query:   68 VLDKVQGSRSQHRAYARVGSVPEIVEGDYVLMAGVRRRGFTPKILITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRFDADAALEITAELKETFQH-----AFAQDRGYVGGEDGPGFDVEVEWVRFRQRRQTWEKLS 205
            V DK    R  ++   R  +V    EGDYVL + V  +    K+L+TW GP+RV+ A+    + +Q++++G   +VH +RL+F ADA+L++T EL+E         A  + + +   +    ++V V+W        ++E L+
Sbjct:    5 VKDKRLKQRLLNKKRERGENVINFTEGDYVLRSRVDEKSGN-KLLVTWVGPYRVLRADAHS-FLIQHLITGAELDVHASRLKFYADASLDVTEELREHISSQGIVLAIEKLKEHRWNDQIRDYEVLVQWKGLEAIEDSYEPLT 145          
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A6A4E2Q0_9STRA (Chromo domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E2Q0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.210e-9
Identity = 43/143 (30.07%), Postives = 75/143 (52.45%), Query Frame = 0
Query:   68 VLDKVQGSRSQHRAYARVGSVPEIVEGDYVLMAGVRRRGFTPKILITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRFDADAALEITAELKETFQH-----AFAQDRGYVGGEDGPGFDVEVEWVRFRQRRQTWEKLS 205
            V DK    R  ++   R  +V    EGDYVL + V  +    K+L+TW GP+RV+ A+    + +Q++++G   +VH +RL+F ADA+L++T EL+E         A  + + +        ++V V+W        ++E L+
Sbjct:    5 VKDKRLKQRLLNKKRERGENVINFTEGDYVLRSRVDEKSGN-KLLVTWVGPYRVLRADAHS-FLIQHLITGAELDVHASRLKFYADASLDVTEELREHISSQGIVLAIEKLKEHRWNHQIRDYEVLVQWKGLEAIEDSYEPLT 145          
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A6A3PYH1_9STRA (Chromo domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PYH1_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.700e-9
Identity = 42/143 (29.37%), Postives = 75/143 (52.45%), Query Frame = 0
Query:   68 VLDKVQGSRSQHRAYARVGSVPEIVEGDYVLMAGVRRRGFTPKILITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRFDADAALEITAELKETFQH-----AFAQDRGYVGGEDGPGFDVEVEWVRFRQRRQTWEKLS 205
            V DK    R  ++   R  +V    EGDYVL + V  +    K+L+TW G +RV+ A+    + +Q++++G   +VH +RL+F ADA+L++T EL+E         A  + + +   +    ++V V+W        ++E L+
Sbjct:    5 VQDKRLKQRLLNKKRERGENVINFTEGDYVLRSRVDEKSGN-KLLVTWVGSYRVLRADAHS-FLIQHLITGAELDVHASRLKFYADASLDVTEELREHISSQGIVLAIEKLKEHRWSDQIRDYEVLVQWKGLEAIEDSYEPLT 145          
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Match: A0A225VF53_9STRA (Chromo domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VF53_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.490e-9
Identity = 47/168 (27.98%), Postives = 86/168 (51.19%), Query Frame = 0
Query:   43 GVLDEMVLRLKVQHVVEAQRHLQKEVLDKVQGSRSQHRAYARVGSVPEIVEGDYVLMAGVRRRGFTPKILITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRFDADAALEITAELKETFQH-----AFAQDRGYVGGEDGPGFDVEVEWVRFRQRRQTWEKLS 205
            G LD +   +   H V   + L++ +L+K +          R  +V    EGDYVL + V  +  T K+L+TW GP+RVV A+    + ++++++G   ++H +RL+F ADA+L++T EL E         A  + + +   +    F++ V+W        ++E L+
Sbjct:   75 GFLDGLRSSIHAMHNVVDDQRLKQRLLNKKR---------ERGENVVNFTEGDYVLRSRVDEKK-THKLLVTWVGPFRVVRADAHS-FLIKHLITGAELDIHASRLKFYADASLDVTEELLEHISSQGIILAVEKLKDHRWNDAIGDFEILVQWRGLEAIEDSYEPLT 231          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9410.21008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE7.410e-5563.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS6_9PHAE1.120e-4445.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE8.980e-4346.29Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAI3_9PHAE3.470e-3850.38Chromo domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LBX7_9PHAE2.260e-2070.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L994_9PHAE4.290e-2061.33Chromo domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6G0ML56_9STRA1.060e-930.07Chromo domain-containing protein n=1 Tax=Phytophth... [more]
A0A6A4E2Q0_9STRA2.210e-930.07Chromo domain-containing protein n=3 Tax=Phytophth... [more]
A0A6A3PYH1_9STRA2.700e-929.37Chromo domain-containing protein n=1 Tax=Phytophth... [more]
A0A225VF53_9STRA3.490e-927.98Chromo domain-containing protein n=1 Tax=Phytophth... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9410contigEcto-sp13_S_contig9410:661..1278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9410.21008.1mRNA_Ecto-sp13_S_contig9410.21008.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9410 363..2652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9410.21008.1 ID=prot_Ecto-sp13_S_contig9410.21008.1|Name=mRNA_Ecto-sp13_S_contig9410.21008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp
MPEARATTYWNSFIAVVVVAVVDVVVIVGDGVSFAVADKWKVGVLDEMVL
RLKVQHVVEAQRHLQKEVLDKVQGSRSQHRAYARVGSVPEIVEGDYVLMA
GVRRRGFTPKILITWRGPWRVVAAERPQVYGVQNIVSGEVRNVHVARLRF
DADAALEITAELKETFQHAFAQDRGYVGGEDGPGFDVEVEWVRFRQRRQT
WEKLS*
back to top