prot_Ecto-sp13_S_contig94031.20999.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig94031.20999.1
Unique Name	prot_Ecto-sp13_S_contig94031.20999.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	93

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig94031.20999.1 vs. uniprot
Match: D8LH89_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH89_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.690e-51
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0

Query:    1 FFSAPAVKSGSFAPPAVRATSMVAPKMTMGIEQIADVLPLVPSEAHNAGFEMANNPLLLSVSAESFGGLIGPIGGCLAVAIFIVVMAPPRVD 92
            F +  AVKSGSFA PAVRATSMVAPKMTMG+EQIADVLPLVPSEAHNAGFEMANNPLLLSVSA+SFGGLIGPIGGCLAVAIFIVVMAPPRVD
Sbjct:   20 FIAPSAVKSGSFATPAVRATSMVAPKMTMGLEQIADVLPLVPSEAHNAGFEMANNPLLLSVSADSFGGLIGPIGGCLAVAIFIVVMAPPRVD 111

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig94031.20999.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig94031.20999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LH89_ECTSI	2.690e-51	92.39	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 88..92
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 66..87
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..65
None	No IPR available	TMHMM	TMhelix		coord: 65..87

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig94031	contig	Ecto-sp13_S_contig94031:63..341 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig94031.20999.1	mRNA_Ecto-sp13_S_contig94031.20999.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig94031 63..341 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig94031.20999.1 ID=prot_Ecto-sp13_S_contig94031.20999.1|Name=mRNA_Ecto-sp13_S_contig94031.20999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
FFSAPAVKSGSFAPPAVRATSMVAPKMTMGIEQIADVLPLVPSEAHNAGF
EMANNPLLLSVSAESFGGLIGPIGGCLAVAIFIVVMAPPRVD*